RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 SOX10P56693 466 aa12.15□□□□□ -0.47
BRCC3-204ENST00000369462 IGBP1P78318 339 aa12.15□□□□□ -0.47
BRCC3-204ENST00000369462 HERC4Q5GLZ8 1057 aaPredicted RBP12.15□□□□□ -0.47
BRCC3-204ENST00000369462 CXCL17Q6UXB2 119 aa12.15□□□□□ -0.47
BRCC3-204ENST00000369462 CCDC65Q8IXS2 484 aa12.15□□□□□ -0.47
BRCC3-204ENST00000369462 SLC7A3Q8WY07 619 aa12.15□□□□□ -0.47
BRCC3-204ENST00000369462 HPS3Q969F9 1004 aa12.15□□□□□ -0.47
BRCC3-204ENST00000369462 HIP1RO75146 1068 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 RHOBTB3O94955 611 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 NKX3-2P78367 333 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 TBC1D8BQ0IIM8 1120 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 MORC3Q14149 939 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 KCNB1Q14721 858 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 KCNA10Q16322 511 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 DPCR1Q3MIW9 517 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 FBXO46Q6PJ61 603 aaPredicted RBP12.14□□□□□ -0.47
BRCC3-204ENST00000369462 RNF180Q86T96 592 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 SMYD4Q8IYR2 804 aaPredicted RBP12.14□□□□□ -0.47
BRCC3-204ENST00000369462 KLHDC9Q8NEP7 349 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 CEP89Q96ST8 783 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 RNF208Q9H0X6 261 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 DHX33Q9H6R0 707 aaKnown RBP12.14□□□□□ -0.47
BRCC3-204ENST00000369462 GPRC5CQ9NQ84 441 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 ZEB2O60315 1214 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 KPNA6O60684 536 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 FAM13AO94988 1023 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 ASGR1P07306 291 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 COASYQ13057 564 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 MFSD10Q14728 455 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 STX1AQ16623 288 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 FAM102BQ5T8I3 360 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 DAW1Q8N136 415 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 TRIML1Q8N9V2 468 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 ATP6V0A4Q9HBG4 840 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 XPNPEP1Q9NQW7 623 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 PDLIM7Q9NR12 457 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 TBC1D7Q9P0N9 293 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 ODF2LQ9ULJ1 636 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 COL4A3BPQ9Y5P4 624 aa12.14□□□□□ -0.47
BRCC3-204ENST00000369462 FRMD3A2A2Y4 597 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 PSEN2P49810 448 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 NLRP12P59046 1061 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 STK4Q13043 487 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 PPFIA1Q13136 1202 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 EMC2Q15006 297 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 LRRC41Q15345 812 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 MCPH1Q8NEM0 835 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 PARVGQ9HBI0 331 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 ANO10Q9NW15 660 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 LOXHD1Q8IVV2 1947 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 CCL5P13501 91 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 CST5P28325 142 aaPredicted RBP12.13□□□□□ -0.47
BRCC3-204ENST00000369462 MAPK7Q13164 816 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 PKN2Q16513 984 aaKnown RBP12.13□□□□□ -0.47
BRCC3-204ENST00000369462 ANO6Q4KMQ2 910 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 ZNF484Q5JVG2 852 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 CCSAPQ6IQ19 270 aaPredicted RBP12.13□□□□□ -0.47
BRCC3-204ENST00000369462 MYCT1Q8N699 235 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 PCSK9Q8NBP7 692 aaKnown RBP12.13□□□□□ -0.47
BRCC3-204ENST00000369462 TMEM143Q96AN5 459 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 ZBTB10Q96DT7 871 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 DEFB118Q96PH6 123 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 MTG1Q9BT17 334 aaPredicted RBP12.13□□□□□ -0.47
BRCC3-204ENST00000369462 KATNAL1Q9BW62 490 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 DNAJC25Q9H1X3 360 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 TSPY26PQ9H489 355 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 SUGCTQ9HAC7 445 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 SLC39A2Q9NP94 309 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 PAK6Q9NQU5 681 aaPredicted RBP12.13□□□□□ -0.47
BRCC3-204ENST00000369462 SETD4Q9NVD3 440 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 MAPK8IP1Q9UQF2 711 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 GDAQ9Y2T3 454 aa12.13□□□□□ -0.47
BRCC3-204ENST00000369462 SPDYE4A6NLX3 237 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 HAS3O00219 553 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 MAFO75444 373 aaPredicted RBP12.12□□□□□ -0.47
BRCC3-204ENST00000369462 RFC5P40937 340 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 EHHADHQ08426 723 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 FAM26FQ5R3K3 315 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 ZNF658Q5TYW1 1059 aaPredicted RBP12.12□□□□□ -0.47
BRCC3-204ENST00000369462 SFR1Q86XK3 245 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 DRC1Q96MC2 740 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 TIPINQ9BVW5 301 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 SMIM10L2AP0DMW4 78 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 SMIM10L2BP0DMW5 78 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 KLRC1P26715 233 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 ZNF131P52739 623 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 GRIK4Q16099 956 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 ODR4Q5SWX8 454 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 GAS2L3Q86XJ1 694 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 LRRC71Q8N4P6 559 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 METTL13Q8N6R0 699 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 LARSQ9P2J5 1176 aaKnown RBP12.12□□□□□ -0.47
BRCC3-204ENST00000369462 PPME1Q9Y570 386 aa12.12□□□□□ -0.47
BRCC3-204ENST00000369462 C11orf57Q6ZUT1 292 aaPredicted RBP12.11□□□□□ -0.47
BRCC3-204ENST00000369462 ARRDC4Q8NCT1 418 aa12.11□□□□□ -0.47
BRCC3-204ENST00000369462 GLIS3Q8NEA6 775 aa12.11□□□□□ -0.47
BRCC3-204ENST00000369462 KIFAP3Q92845 792 aa12.11□□□□□ -0.47
BRCC3-204ENST00000369462 C22orf31O95567 290 aa12.11□□□□□ -0.47
BRCC3-204ENST00000369462 GAP43P17677 238 aa12.11□□□□□ -0.47
BRCC3-204ENST00000369462 PSMD2Q13200 908 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms