RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 IP6K2Q9UHH9 426 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 GABRQQ9UN88 632 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 LUC7L2Q9Y383 392 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 RNF114Q9Y508 228 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 DMXL1Q9Y485 3027 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 ATRNL1Q5VV63 1379 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 BPTFQ12830 3046 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 FAM205AQ6ZU69 1335 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 MYPNQ86TC9 1320 aa4.06□□□□□ -1.76
ECHDC1-205ENST00000368295 C9orf172C9J069 976 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 K7ENM7 598 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 SNX2O60749 519 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 FBXO24O75426 580 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 BAIAP3O94812 1187 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 CYP11A1P05108 521 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 CCDC159P0C7I6 412 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 U2AF1L5P0DN76 240 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 PSMC4P43686 418 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 GUCY2FP51841 1108 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 NLRP12P59046 1061 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 UBXN2AP68543 259 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 JAG1P78504 1218 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 HMGN5P82970 282 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 U2AF1Q01081 240 aaKnown RBP eCLIP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 SLC39A6Q13433 755 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 POU4F3Q15319 338 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 TTC31Q49AM3 519 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 WWC2Q6AWC2 1192 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 IL31Q6EBC2 164 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 CPLX2Q6PUV4 134 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 IGF2-ASQ6U949 168 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 NFXL1Q6ZNB6 911 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 TOGARAM2Q6ZUX3 1019 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 MAATS1Q7Z4T9 603 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 THNSL2Q86YJ6 484 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 SULF2Q8IWU5 870 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 TEX9Q8N6V9 391 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 PJA1Q8NG27 643 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 THAP3Q8WTV1 239 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 HNRNPLLQ8WVV9 542 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 TBC1D20Q96BZ9 403 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 LBHD1Q9BQE6 289 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 CORO1BQ9BR76 489 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 SARGQ9BW04 601 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 USP26Q9BXU7 913 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 XPO4Q9C0E2 1151 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 DBNDD1Q9H9R9 158 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 RASSF1Q9NS23 344 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 PRKAG3Q9UGI9 489 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 IPPQ9Y573 584 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 RTL9Q8NET4 1388 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 COL1A1P02452 1464 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 LRRC37A2A6NM11 1700 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 hCG_1984214I3L0E3 225 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 IPO5O00410 1097 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 TM4SF5O14894 197 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 RHOBTB3O94955 611 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 CELA3AP09093 270 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 H2AFB1P0C5Y9 115 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 H2AFB2P0C5Z0 115 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 IDEP14735 1019 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 CAP2P40123 477 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 CD151P48509 253 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 NASPP49321 788 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 NRG1Q02297 640 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 TMED1Q13445 227 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 RASGRF1Q13972 1273 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 TRIM29Q14134 588 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 SMC1AQ14683 1233 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 LRRC14Q15048 493 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 ARHGEF6Q15052 776 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 DUOXA2Q1HG44 320 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 TM4SF20Q53R12 229 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 TAF3Q5VWG9 929 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 ACAD11Q709F0 780 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 OTUD6AQ7L8S5 288 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 LSRQ86X29 649 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 PASD1Q8IV76 773 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 GIMAP8Q8ND71 665 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 APPL2Q8NEU8 664 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 UBASH3BQ8TF42 649 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 BRI3BPQ8WY22 251 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 MFSD3Q96ES6 412 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 SPAG5Q96R06 1193 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 TRIM56Q9BRZ2 755 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 FAM126AQ9BYI3 521 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 ASPSCR1Q9BZE9 553 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 PLCB1Q9NQ66 1216 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 EPS15L1Q9UBC2 864 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 CPA4Q9UI42 421 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 LEMD3Q9Y2U8 911 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 IKBKGQ9Y6K9 419 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 TAF1P21675 1872 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 ABCC12Q96J65 1359 aa4.05□□□□□ -1.76
ECHDC1-205ENST00000368295 EP300Q09472 2414 aaPredicted RBP4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 ZNF462Q96JM2 2506 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 DDX60LQ5H9U9 1706 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 GRXCR1A8MXD5 290 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 ENC1O14682 589 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 PIP5K1CO60331 668 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms