RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 SUPT20HQ8NEM7 779 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 GRAPLQ8TC17 118 aaPredicted RBP6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 KCNN1Q92952 543 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 PPP1R14AQ96A00 147 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 GPR101Q96P66 508 aaPredicted RBP6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 RTFDC1Q9BY42 306 aaPredicted RBP6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 GLIS2Q9BZE0 524 aaPredicted RBP6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 CD320Q9NPF0 282 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 BABAM1Q9NWV8 329 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 CHPF2Q9P2E5 772 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 EMC9Q9Y3B6 208 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 SH3TC1Q8TE82 1336 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 DUOX1Q9NRD9 1551 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 COL4A1P02462 1669 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 LRRC37AA6NMS7 1700 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 MYOCOSA0A1B0GUC4 107 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 C2orf71A6NGG8 1288 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 YDJCA8MPS7 323 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 ETV2O00321 342 aaPredicted RBP6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 CHL1O00533 1208 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 CELF2O95319 508 aaKnown RBP6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 C1QTNF9P0C862 333 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 ETFBP38117 255 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 YBX1P67809 324 aaKnown RBP6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 KIAA2012Q0VF49 1180 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 DDX10Q13206 875 aaKnown RBP6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 NR1I3Q14994 352 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 ATG14Q6ZNE5 492 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 CABP7Q86V35 215 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 ZNF513Q8N8E2 541 aaPredicted RBP6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 ZSCAN18Q8TBC5 510 aaPredicted RBP6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 FAM89AQ96GI7 184 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 EPN3Q9H201 632 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 VPS33BQ9H267 617 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 PDLIM7Q9NR12 457 aa6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 POLR2AP24928 1970 aaKnown RBP6.68□□□□□ -1.34
RNU4-4P-201ENST00000364588 SRGAP3O43295 1099 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 SUSD5O60279 629 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 DDAH1O94760 285 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 KCNH1O95259 989 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 KRT1P04264 644 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 PAMP19021 973 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 DLG4P78352 724 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 TNIP1Q15025 636 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 RAB3GAP1Q15042 981 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 WDR43Q15061 677 aaKnown RBP eCLIP6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 KCNA10Q16322 511 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 KRTAP19-4Q3LI73 84 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 DLK2Q6UY11 383 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 EEPD1Q7L9B9 569 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 SAPCD2Q86UD0 394 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 TRIM59Q8IWR1 403 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 PLBD2Q8NHP8 589 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 CELF1Q92879 486 aaKnown RBP6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 RUNDC1Q96C34 613 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 ABHD8Q96I13 439 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 MCMBPQ9BTE3 642 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 DBNDD1Q9H9R9 158 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 SIRT5Q9NXA8 310 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 CNOT7Q9UIV1 285 aaKnown RBP6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 CASP8AP2Q9UKL3 1982 aa6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 MYBBP1AQ9BQG0 1328 aaKnown RBP6.67□□□□□ -1.34
RNU4-4P-201ENST00000364588 NPHP3-ACAD11A0A0J9YXS1 232 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 B2RBV5 119 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 H7C1D1 291 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 RFXAPO00287 272 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 PSMD14O00487 310 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 VAMP4O75379 141 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 LINC00310P59036 64 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 GPSM2P81274 684 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 SRSF3P84103 164 aaKnown RBP6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 MVKQ03426 396 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 FZD5Q13467 585 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 ISCA1Q9BUE6 129 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 KCNK12Q9HB15 430 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 LRP2BPQ9P2M1 347 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 DBF4Q9UBU7 674 aaPredicted RBP6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 PGAP2Q9UHJ9 254 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 CDHR2Q9BYE9 1310 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 SCN9AQ15858 1988 aa6.66□□□□□ -1.34
RNU4-4P-201ENST00000364588 CCDC85CA6NKD9 419 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 NUDT19A8MXV4 375 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 NPIPB6E9PJ23 425 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 AGRPO00253 132 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 ELL2O00472 640 aaPredicted RBP6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 IRS4O14654 1257 aaPredicted RBP6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 CYBBP04839 570 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 VIPR1P32241 457 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 MAP2K2P36507 400 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 KIR3DS1Q14943 382 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 SF3B3Q15393 1217 aaKnown RBP6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 PLEKHN1Q494U1 663 aaPredicted RBP6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 SV2CQ496J9 727 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 TBC1D10BQ4KMP7 808 aaPredicted RBP6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 BICRALQ6AI39 1079 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 GTF2IRD2BQ6EKJ0 949 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 TMC6Q7Z403 805 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 GTF2IRD2Q86UP8 949 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 ZNF227Q86WZ6 799 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 LRRC56Q8IYG6 542 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms