RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 SMAP1Q8IYB5 467 aaPredicted RBP13.13□□□□□ -0.31
FN1-202ENST00000336916 TMEM35BQ8NCS4 154 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 PPWD1Q96BP3 646 aaKnown RBP13.13□□□□□ -0.31
FN1-202ENST00000336916 ALDH1A1P00352 501 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 GOLGA8HP0CJ92 632 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 RALAP11233 206 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 LZICQ8WZA0 190 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 OPTNQ96CV9 577 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 IFT43Q96FT9 208 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 DDX27Q96GQ7 796 aaKnown RBP13.13□□□□□ -0.31
FN1-202ENST00000336916 SUDS3Q9H7L9 328 aaPredicted RBP13.13□□□□□ -0.31
FN1-202ENST00000336916 SMYD2Q9NRG4 433 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 CARNS1A5YM72 827 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 MEIS1O00470 390 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 LRRN2O75325 713 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 EHHADHQ08426 723 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 ZBTB17Q13105 803 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 TKFCQ3LXA3 575 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 FBXO41Q8TF61 875 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 GPBP1L1Q9HC44 474 aaPredicted RBP13.13□□□□□ -0.31
FN1-202ENST00000336916 DDX56Q9NY93 547 aaKnown RBP13.13□□□□□ -0.31
FN1-202ENST00000336916 CDC23Q9UJX2 597 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 KCNJ6P48051 423 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 GUCY2FP51841 1108 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 Q3C1V9 767 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 PDXDC1Q6P996 788 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 WASHC5Q12768 1159 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 XXYLT1Q8NBI6 393 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 PTPN22Q9Y2R2 807 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 GOLGA8TH3BQL2 631 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 PSMD3O43242 534 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 SUCLA2Q9P2R7 463 aaPredicted RBP13.13□□□□□ -0.31
FN1-202ENST00000336916 FMN2Q9NZ56 1722 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 C19orf81C9J6K1 198 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 MYL3P08590 195 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 CRLF3Q8IUI8 442 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 SP8Q8IXZ3 490 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 CCDC197Q8NCU1 140 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 NXF1Q9UBU9 619 aaKnown RBP13.12□□□□□ -0.31
FN1-202ENST00000336916 ROBO2Q9HCK4 1378 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 TTC8Q8TAM2 541 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 PYROXD1Q8WU10 500 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 N4BP2L2Q92802 583 aaPredicted RBP13.12□□□□□ -0.31
FN1-202ENST00000336916 LBHD1Q9BQE6 289 aaPredicted RBP13.12□□□□□ -0.31
FN1-202ENST00000336916 ACAD9Q9H845 621 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 SYNJ2BP-COX16A0A087WUM0 186 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 RFC1P35251 1148 aaPredicted RBP13.12□□□□□ -0.31
FN1-202ENST00000336916 STAT3P40763 770 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 SNRPFP62306 86 aaKnown RBP13.12□□□□□ -0.31
FN1-202ENST00000336916 ZNF568Q3ZCX4 644 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 FSCBQ5H9T9 825 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 COX16Q9P0S2 106 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 KIDINS220Q9ULH0 1771 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 MROH7-TTC4A0A0A0MT08 1334 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 ASAP2O43150 1006 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 ENOX1Q8TC92 643 aaKnown RBP13.12□□□□□ -0.31
FN1-202ENST00000336916 TNIP3Q96KP6 325 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 SLC38A7Q9NVC3 462 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 UBE4BO95155 1302 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 KDM1AO60341 852 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 LMNAP02545 664 aaKnown RBP13.12□□□□□ -0.31
FN1-202ENST00000336916 CCNE1P24864 410 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 DUOXA2Q1HG44 320 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 WRNIP1Q96S55 665 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 ZNF302Q9NR11 478 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 SNX2O60749 519 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 DCTN3O75935 186 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 SASH1O94885 1247 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 SKAP1Q86WV1 359 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 RAET1EQ8TD07 263 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 BCORL1Q5H9F3 1711 aa13.12□□□□□ -0.31
FN1-202ENST00000336916 MYO3AQ8NEV4 1616 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 EXOC1LA0A1B0GW35 172 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 MAFGO15525 162 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 OPHN1O60890 802 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 DDIT3P35638 169 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 GUCY2DQ02846 1103 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 PPP1R12AO14974 1030 aaPredicted RBP13.11□□□□□ -0.31
FN1-202ENST00000336916 BUB1O43683 1085 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 KRT38O76015 456 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 QARSP47897 775 aaKnown RBP13.11□□□□□ -0.31
FN1-202ENST00000336916 PTH1RQ03431 593 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 MAGEB2O15479 319 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 ECE2O60344 883 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 OAS2P29728 719 aaKnown RBP13.11□□□□□ -0.31
FN1-202ENST00000336916 RWDD2BP57060 319 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 STAMQ92783 540 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 NDUFB9Q9Y6M9 179 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 GPC3P51654 580 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 STILQ15468 1287 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 ALX1Q15699 326 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 ANKRD42Q8N9B4 389 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 PGBD4Q96DM1 585 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 SPDL1Q96EA4 605 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 TMEM51Q9NW97 253 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 ZSWIM5Q9P217 1185 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 KBTBD13C9JR72 458 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 CLGNO14967 610 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 MT-ND3P03897 115 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 PIGBQ92521 554 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms