RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 FRMD5Q7Z6J6 570 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 DPP9Q86TI2 863 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 ERICH1Q86X53 443 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 RPUSD2Q8IZ73 545 aaKnown RBP18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 DYDC2Q96IM9 177 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 FAM205CA6NFA0 338 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 PRPSAP2O60256 369 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 SFNP31947 248 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 DYNLT1P63172 113 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 ADCY1Q08828 1119 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 MYO1EQ12965 1108 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 DARS2Q6PI48 645 aaKnown RBP18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 KCTD6Q8NC69 237 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 SPATA4Q8NEY3 305 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 RBM41Q96IZ5 413 aaKnown RBP18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 SCYL1Q96KG9 808 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 TXLNGQ9NUQ3 528 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 TJP3O95049 919 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 SRGNP10124 158 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 AKR1B1P15121 316 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 GGCXP38435 758 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 GYS2P54840 703 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 NXNQ6DKJ4 435 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 ARHGAP27Q6ZUM4 889 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 GBP5Q96PP8 586 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 TUBB6Q9BUF5 446 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 PDXKO00764 312 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 BAG2O95816 211 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 PRPSAP1Q14558 356 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 DRAP1Q14919 205 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 TRIP13Q15645 432 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 BBS9Q3SYG4 887 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 SCYL3Q8IZE3 742 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 HDAC6Q9UBN7 1215 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 LCMT1Q9UIC8 334 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 PFASO15067 1338 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 PFDN6O15212 129 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 CAV1Q03135 178 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 ASPHQ12797 758 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 MIPOL1Q8TD10 442 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 C7orf25Q9BPX7 421 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 SLITRK6Q9H5Y7 841 aa18.36■□□□□ 0.53
TRAPPC11-201ENST00000334690 SSU72P8A0A1W2PR75 194 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 FAM196BA6NMK8 535 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 ACSL3O95573 720 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 SH3BGRP55822 239 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 OR6B2Q6IFH4 312 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 MORC4Q8TE76 937 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 PYROXD1Q8WU10 500 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 CCDC68Q9H2F9 335 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 SNX25Q9H3E2 840 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 EPB41L4AQ9HCS5 686 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 ADAMTS13Q76LX8 1427 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 NFIXQ14938 502 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 RC3H1Q5TC82 1133 aaKnown RBP18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 ZNF772Q68DY9 489 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 USP49Q70CQ1 688 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 MAP3K14Q99558 947 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 TAF1DQ9H5J8 278 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 ATP6V0A4Q9HBG4 840 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 MTMR4Q9NYA4 1195 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 OSBPP22059 807 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 VAMP7P51809 220 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 HIBCHQ6NVY1 386 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 SP8Q8IXZ3 490 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 GSDMBQ8TAX9 411 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 RUBCNQ92622 972 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 Q9H521 79 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 RPF1Q9H9Y2 349 aaKnown RBP18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 HERC5Q9UII4 1024 aaKnown RBP18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 SNX12Q9UMY4 172 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 SYNJ2BP-COX16A0A087WUM0 186 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 GOLGA8QA0A0J9YX86 632 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 GOLGA8OA6NCC3 632 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 GOLGA8NF8WBI6 632 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 GPC4O75487 556 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 ATP1A1P05023 1023 aaKnown RBP18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 ACTN1P12814 892 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 NUGGCQ68CJ6 796 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 TRIM68Q6AZZ1 485 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 KSR1Q8IVT5 923 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 TC2NQ8N9U0 490 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 RFFLQ8WZ73 363 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 NCAPGQ9BPX3 1015 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 SLC38A10Q9HBR0 1119 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 COX16Q9P0S2 106 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 FBXO40Q9UH90 709 aa18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 PDS5AQ29RF7 1337 aaKnown RBP18.35■□□□□ 0.53
TRAPPC11-201ENST00000334690 ANXA13P27216 316 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 FXR1P51114 621 aaKnown RBP eCLIP18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 GPSM2P81274 684 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 ZNF667Q5HYK9 610 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 ZBTB33Q86T24 672 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 PRPF38AQ8NAV1 312 aaKnown RBP18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 TTC13Q8NBP0 860 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 FAM167AQ96KS9 214 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 CHP1Q99653 195 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 APOL6Q9BWW8 343 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms