RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 ZNF536O15090 1300 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 AP1G2O75843 785 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 ERVK-9P63128 1117 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 PABPC4Q13310 644 aaKnown RBP eCLIP11.29□□□□□ -0.66e-9■■□□□ 12.5
ABCF1-201ENST00000326195 SNX1Q13596 522 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 NOL9Q5SY16 702 aaKnown RBP11.29□□□□□ -0.6
ABCF1-201ENST00000326195 GPRC5AQ8NFJ5 357 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 PARD3BQ8TEW8 1205 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 NELFBQ8WX92 580 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 JAKMIP2Q96AA8 810 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 CCT8L2Q96SF2 557 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 ZNF214Q9UL59 606 aaPredicted RBP11.29□□□□□ -0.6
ABCF1-201ENST00000326195 FAM184BQ9ULE4 1060 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 ATXN2Q99700 1313 aaKnown RBP11.29□□□□□ -0.6
ABCF1-201ENST00000326195 MAST2Q6P0Q8 1798 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 TNPO2O14787 897 aaKnown RBP11.29□□□□□ -0.6
ABCF1-201ENST00000326195 BACH1O14867 736 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 ICAM1P05362 532 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 TRIM21P19474 475 aaKnown RBP11.29□□□□□ -0.6
ABCF1-201ENST00000326195 RCAN1P53805 252 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 SNCBQ16143 134 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 FMNL3Q8IVF7 1028 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 OSBPL7Q9BZF2 842 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 TMEM60Q9H2L4 133 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 GOLGA8KD6RF30 607 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 FECHP22830 423 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 MATR3P43243 847 aaKnown RBP eCLIP11.29□□□□□ -0.6
ABCF1-201ENST00000326195 DPYDQ12882 1025 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 NNTQ13423 1086 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 EEF2KMTQ96G04 330 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 ZIM3Q96PE6 472 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 EPN3Q9H201 632 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 EHD2Q9NZN4 543 aa11.29□□□□□ -0.6
ABCF1-201ENST00000326195 IRX1P78414 480 aaPredicted RBP11.28□□□□□ -0.6
ABCF1-201ENST00000326195 TMEM63BQ5T3F8 832 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 CCDC70Q6NSX1 233 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 C6orf89Q6UWU4 347 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 MAEAQ7L5Y9 396 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 IFNL1Q8IU54 200 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 LENG1Q96BZ8 264 aaPredicted RBP11.28□□□□□ -0.6
ABCF1-201ENST00000326195 LACRTQ9GZZ8 138 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 PNMA3Q9UL41 463 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.28□□□□□ -0.6
ABCF1-201ENST00000326195 PLIN4Q96Q06 1357 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 MEIS2O14770 477 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 ATP2C2O75185 946 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 IDEP14735 1019 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 ASIC1P78348 528 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 NT5DC1Q5TFE4 455 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 PAPD7Q5XG87 772 aaKnown RBP11.28□□□□□ -0.6
ABCF1-201ENST00000326195 YTHDF3Q7Z739 585 aaKnown RBP11.28□□□□□ -0.6
ABCF1-201ENST00000326195 MYCBPAPQ8TBZ2 947 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 TBC1D31Q96DN5 1066 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 CCDC114Q96M63 670 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 MMP19Q99542 508 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 LUC7L2Q9Y383 392 aaKnown RBP11.28□□□□□ -0.6
ABCF1-201ENST00000326195 PASKQ96RG2 1323 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 ENO4A6NNW6 628 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 ACTN4O43707 911 aaKnown RBP11.28□□□□□ -0.6
ABCF1-201ENST00000326195 SLC37A4O43826 429 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 GCKP35557 465 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 TMTC1Q8IUR5 882 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 PARK7Q99497 189 aaKnown RBP11.28□□□□□ -0.6
ABCF1-201ENST00000326195 ZHX3Q9H4I2 956 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 ACAD9Q9H845 621 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 EXOC1Q9NV70 894 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 MYO1AQ9UBC5 1043 aa11.28□□□□□ -0.6
ABCF1-201ENST00000326195 EPN1Q9Y6I3 576 aaPredicted RBP11.28□□□□□ -0.6
ABCF1-201ENST00000326195 POTEMA6NI47 508 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 MEIS1O00470 390 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 GTPBP6O43824 516 aaPredicted RBP11.27□□□□□ -0.61
ABCF1-201ENST00000326195 NDUFA10O95299 355 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 PSMC4P43686 418 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 FKBP1BP68106 108 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 ARHGAP4P98171 946 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 NPY5RQ15761 445 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 PTGISQ16647 500 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 KCTD19Q17RG1 926 aaPredicted RBP11.27□□□□□ -0.61
ABCF1-201ENST00000326195 ARMC3Q5W041 872 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 LBX2Q6XYB7 198 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 NLRP14Q86W24 1093 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 ZBTB10Q96DT7 871 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 SPDL1Q96EA4 605 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 WDR11Q9BZH6 1224 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 RANBP17Q9H2T7 1088 aaKnown RBP11.27□□□□□ -0.61
ABCF1-201ENST00000326195 KCNH4Q9UQ05 1017 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 ANKRD33BA6NCL7 494 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 ZNF233A6NK53 670 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 KCNJ18B7U540 433 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 RPN1P04843 607 aaKnown RBP11.27□□□□□ -0.61
ABCF1-201ENST00000326195 MCM3P25205 808 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 NOGQ13253 232 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 KCNJ12Q14500 433 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 KCNB1Q14721 858 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 QPCTQ16769 361 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 NEK8Q86SG6 692 aa11.27□□□□□ -0.61
ABCF1-201ENST00000326195 PROCA1Q8NCQ7 364 aaPredicted RBP11.27□□□□□ -0.61
ABCF1-201ENST00000326195 SYTL5Q8TDW5 730 aaPredicted RBP11.27□□□□□ -0.61
ABCF1-201ENST00000326195 THOC1Q96FV9 657 aaKnown RBP11.27□□□□□ -0.61
ABCF1-201ENST00000326195 CALML4Q96GE6 196 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms