RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 GJA10Q969M2 543 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 CTNND1O60716 968 aaKnown RBP13.49□□□□□ -0.25
FN1-201ENST00000323926 TFAMQ00059 246 aaKnown RBP13.49□□□□□ -0.25
FN1-201ENST00000323926 ELOA2Q8IYF1 753 aaPredicted RBP13.49□□□□□ -0.25
FN1-201ENST00000323926 JAG2Q9Y219 1238 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 ABCB11O95342 1321 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 METP08581 1390 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 E9PMD0 336 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 MAPK6Q16659 721 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 FRMPD2Q68DX3 1309 aaPredicted RBP13.49□□□□□ -0.25
FN1-201ENST00000323926 BEST2Q8NFU1 509 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 SLC39A2Q9NP94 309 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 WASHC5Q12768 1159 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 KAZNQ674X7 775 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 G2E3Q7L622 706 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 LRRC47Q8N1G4 583 aaKnown RBP13.49□□□□□ -0.25
FN1-201ENST00000323926 ZFP91Q96JP5 570 aaPredicted RBP13.49□□□□□ -0.25
FN1-201ENST00000323926 COA7Q96BR5 231 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 ALKBH8Q96BT7 664 aaKnown RBP13.49□□□□□ -0.25
FN1-201ENST00000323926 SCHIP1Q9P0W5 487 aaPredicted RBP13.49□□□□□ -0.25
FN1-201ENST00000323926 TRAPPC3O43617 180 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 MYO1DO94832 1006 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 TTLL4Q14679 1199 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 MESDQ14696 234 aa13.49□□□□□ -0.25
FN1-201ENST00000323926 LSG1Q9H089 658 aaKnown RBP13.49□□□□□ -0.25
FN1-201ENST00000323926 STX18Q9P2W9 335 aaKnown RBP13.49□□□□□ -0.25
FN1-201ENST00000323926 BAG2O95816 211 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 RAD51Q06609 339 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 SARM1Q6SZW1 724 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 ANKRD42Q8N9B4 389 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 TMEM35BQ8NCS4 154 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 PI4K2BQ8TCG2 481 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 CFAP73A6NFT4 308 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 TTC23LQ6PF05 361 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 FASTKD5Q7L8L6 764 aaKnown RBP13.48□□□□□ -0.25
FN1-201ENST00000323926 USP13Q92995 863 aaPredicted RBP13.48□□□□□ -0.25
FN1-201ENST00000323926 FGD4Q96M96 766 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.48□□□□□ -0.25
FN1-201ENST00000323926 WDR70Q9NW82 654 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 TARSL2A2RTX5 802 aaKnown RBP13.48□□□□□ -0.25
FN1-201ENST00000323926 LRRIQ3A6PVS8 624 aaPredicted RBP13.48□□□□□ -0.25
FN1-201ENST00000323926 NDUFA10O95299 355 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 KRT4P19013 534 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 USP11P51784 963 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 SNX1Q13596 522 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 SCFD1Q8WVM8 642 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 MRRFQ96E11 262 aaKnown RBP13.48□□□□□ -0.25
FN1-201ENST00000323926 NSMCE4AQ9NXX6 385 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 VPS9D1Q9Y2B5 631 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 KRT1P04264 644 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 SFSWAPQ12872 951 aaKnown RBP13.48□□□□□ -0.25
FN1-201ENST00000323926 ZNF667Q5HYK9 610 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 PLA2G4BP0C869 781 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 KCNA4P22459 653 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 EFNA5P52803 228 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 CUL4AQ13619 759 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 AP1ARQ63HQ0 302 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 TRIM55Q9BYV6 548 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 CLDN3O15551 220 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 MAN1A2O60476 641 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 GCKP35557 465 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 EPHB1P54762 984 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 ABCE1P61221 599 aaKnown RBP13.48□□□□□ -0.25
FN1-201ENST00000323926 MROH2AA6NES4 1674 aa13.48□□□□□ -0.25
FN1-201ENST00000323926 SH2B2O14492 632 aaPredicted RBP13.47□□□□□ -0.25
FN1-201ENST00000323926 OCRLQ01968 901 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 RESP18Q5W5W9 173 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 PGBD1Q96JS3 809 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 PSMB7Q99436 277 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 FRMD8Q9BZ67 464 aaPredicted RBP13.47□□□□□ -0.25
FN1-201ENST00000323926 KRT87PA6NCN2 255 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 SNX2O60749 519 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 RANBP1P43487 201 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 KCNJ6P48051 423 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 TCP11X2Q5H9J9 407 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 SLC1A1P43005 524 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 DHX34Q14147 1143 aaKnown RBP13.47□□□□□ -0.25
FN1-201ENST00000323926 C4orf50Q6ZRC1 276 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 RDH13Q8NBN7 331 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 NHEJ1Q9H9Q4 299 aaPredicted RBP13.47□□□□□ -0.25
FN1-201ENST00000323926 APOBEC2Q9Y235 224 aaKnown RBP13.47□□□□□ -0.25
FN1-201ENST00000323926 PRUNE1Q86TP1 453 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 KRT35Q92764 455 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 DACT3Q96B18 629 aaPredicted RBP13.47□□□□□ -0.25
FN1-201ENST00000323926 ZMAT2Q96NC0 199 aaKnown RBP13.47□□□□□ -0.25
FN1-201ENST00000323926 A0A087WUV0 522 aaPredicted RBP13.47□□□□□ -0.25
FN1-201ENST00000323926 ZRANB2O95218 330 aaKnown RBP eCLIP13.47□□□□□ -0.25
FN1-201ENST00000323926 ARHGAP27Q6ZUM4 889 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 BTBD18B2RXH4 712 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 CDH2P19022 906 aaPredicted RBP13.47□□□□□ -0.25
FN1-201ENST00000323926 PSMA2P25787 234 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 AP2B1P63010 937 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 FAM47AQ5JRC9 791 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 SDR42E1Q8WUS8 393 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 ALDH8A1Q9H2A2 487 aaPredicted RBP13.47□□□□□ -0.25
FN1-201ENST00000323926 NR1D1P20393 614 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 XAB2Q9HCS7 855 aaKnown RBP13.47□□□□□ -0.25
FN1-201ENST00000323926 EMILIN3Q9NT22 766 aa13.47□□□□□ -0.25
FN1-201ENST00000323926 UGP2Q16851 508 aa13.46□□□□□ -0.25
FN1-201ENST00000323926 P3H1Q32P28 736 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms