RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 IREB2P48200 963 aaKnown RBP20.04■□□□□ 0.8
SHISA3-201ENST00000319234 TRIM58Q8NG06 486 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 NSUN6Q8TEA1 469 aaKnown RBP20.04■□□□□ 0.8
SHISA3-201ENST00000319234 PARVGQ9HBI0 331 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 POLD4Q9HCU8 107 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 SEL1LQ9UBV2 794 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 RCCD1A6NED2 376 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 SFI1A8K8P3 1242 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 LYPLA2O95372 231 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 GCNT3O95395 438 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 GUCY2CP25092 1073 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 ZNF131P52739 623 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 DPY19L2Q6NUT2 758 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 NLRX1Q86UT6 975 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 GPRASP2Q96D09 838 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 CYP39A1Q9NYL5 469 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 HDAC6Q9UBN7 1215 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 SAMM50Q9Y512 469 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 TESPA1A2RU30 521 aaPredicted RBP20.03■□□□□ 0.8
SHISA3-201ENST00000319234 EIF3DO15371 548 aaKnown RBP eCLIP20.03■□□□□ 0.8
SHISA3-201ENST00000319234 MAFGO15525 162 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 ATP9AO75110 1047 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 QARSP47897 775 aaKnown RBP20.03■□□□□ 0.8
SHISA3-201ENST00000319234 PLS1Q14651 629 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 MMS19Q96T76 1030 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 BCAS3Q9H6U6 928 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 MED4Q9NPJ6 270 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 TYW1Q9NV66 732 aaKnown RBP20.03■□□□□ 0.8
SHISA3-201ENST00000319234 DBR1Q9UK59 544 aaKnown RBP20.03■□□□□ 0.8
SHISA3-201ENST00000319234 ADAM21Q9UKJ8 722 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 JRKLQ9Y4A0 524 aa20.03■□□□□ 0.8
SHISA3-201ENST00000319234 WDR90Q96KV7 1748 aa20.02■□□□□ 0.8
SHISA3-201ENST00000319234 TACC1O75410 805 aa20.02■□□□□ 0.8
SHISA3-201ENST00000319234 PRLRP16471 622 aa20.02■□□□□ 0.8
SHISA3-201ENST00000319234 NR2F2P24468 414 aa20.02■□□□□ 0.8
SHISA3-201ENST00000319234 JAK3P52333 1124 aa20.02■□□□□ 0.8
SHISA3-201ENST00000319234 KRT76Q01546 638 aa20.02■□□□□ 0.8
SHISA3-201ENST00000319234 TREML2Q5T2D2 321 aa20.02■□□□□ 0.8
SHISA3-201ENST00000319234 USP50Q70EL3 339 aaPredicted RBP20.02■□□□□ 0.8
SHISA3-201ENST00000319234 TRIM59Q8IWR1 403 aa20.02■□□□□ 0.8
SHISA3-201ENST00000319234 FAM71BQ8TC56 605 aa20.02■□□□□ 0.8
SHISA3-201ENST00000319234 L3MBTL3Q96JM7 780 aaPredicted RBP20.02■□□□□ 0.8
SHISA3-201ENST00000319234 A1CFQ9NQ94 594 aaKnown RBP20.02■□□□□ 0.8
SHISA3-201ENST00000319234 SFNP31947 248 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 ITIH3Q06033 890 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 CNKSR2Q8WXI2 1034 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 RUBCNQ92622 972 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 IFIH1Q9BYX4 1025 aaKnown RBP20.01■□□□□ 0.79
SHISA3-201ENST00000319234 TCEAL9Q9UHQ7 104 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 FAM184BQ9ULE4 1060 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 TFR2Q9UP52 801 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 WDR64B1ANS9 1081 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 ZNF263O14978 683 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 PPATQ06203 517 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 HSP90B2PQ58FF3 399 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 PADI6Q6TGC4 694 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 ZNF572Q7Z3I7 529 aaPredicted RBP20.01■□□□□ 0.79
SHISA3-201ENST00000319234 CHST13Q8NET6 341 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 RDM1Q8NG50 284 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 ZC3H15Q8WU90 426 aaKnown RBP20.01■□□□□ 0.79
SHISA3-201ENST00000319234 INPP4AQ96PE3 977 aaPredicted RBP20.01■□□□□ 0.79
SHISA3-201ENST00000319234 NUCKS1Q9H1E3 243 aaKnown RBP20.01■□□□□ 0.79
SHISA3-201ENST00000319234 ARHGAP20Q9P2F6 1191 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 PCDHA13Q9Y5I0 950 aa20.01■□□□□ 0.79
SHISA3-201ENST00000319234 PAPPA2Q9BXP8 1791 aa20■□□□□ 0.79
SHISA3-201ENST00000319234 UBE4BO95155 1302 aa20■□□□□ 0.79
SHISA3-201ENST00000319234 RPL13P26373 211 aaKnown RBP20■□□□□ 0.79
SHISA3-201ENST00000319234 NMT1P30419 496 aaKnown RBP20■□□□□ 0.79
SHISA3-201ENST00000319234 NF2P35240 595 aa20■□□□□ 0.79
SHISA3-201ENST00000319234 KIF11P52732 1056 aa20■□□□□ 0.79
SHISA3-201ENST00000319234 CYP27A1Q02318 531 aa20■□□□□ 0.79
SHISA3-201ENST00000319234 LBX2Q6XYB7 198 aa20■□□□□ 0.79
SHISA3-201ENST00000319234 STXBP4Q6ZWJ1 553 aa20■□□□□ 0.79
SHISA3-201ENST00000319234 ZNF720Q7Z2F6 126 aa20■□□□□ 0.79
SHISA3-201ENST00000319234 FRMD5Q7Z6J6 570 aa20■□□□□ 0.79
SHISA3-201ENST00000319234 FIZ1Q96SL8 496 aa20■□□□□ 0.79
SHISA3-201ENST00000319234 MMRN2Q9H8L6 949 aa20■□□□□ 0.79
SHISA3-201ENST00000319234 ELP3Q9H9T3 547 aa20■□□□□ 0.79
SHISA3-201ENST00000319234 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20■□□□□ 0.79
SHISA3-201ENST00000319234 LOXHD1Q8IVV2 1947 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 STAM2O75886 525 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 CCDC70Q6NSX1 233 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 ZNF746Q6NUN9 644 aaPredicted RBP19.99■□□□□ 0.79
SHISA3-201ENST00000319234 C4orf19Q8IY42 314 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 CAGE1Q8TC20 777 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 CDCA5Q96FF9 252 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 SENP7Q9BQF6 1050 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 FAM207AQ9NSI2 230 aaPredicted RBP19.99■□□□□ 0.79
SHISA3-201ENST00000319234 SNX12Q9UMY4 172 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 ASTN1O14525 1302 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 SSU72P8A0A1W2PR75 194 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 MACROD2A1Z1Q3 448 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 PJA2O43164 708 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 SRGAP2O75044 1071 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 HIP1RO75146 1068 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 CCNE2O96020 404 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 ERCC3P19447 782 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 EPHX2P34913 555 aa19.99■□□□□ 0.79
SHISA3-201ENST00000319234 AARSP49588 968 aaKnown RBP eCLIP19.99■□□□□ 0.79
SHISA3-201ENST00000319234 PSMC5P62195 406 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms