RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SAPCD2Q86UD0 394 aa6.06□□□□□ -1.44
CCDC54-201ENST00000261058 STK32CQ86UX6 486 aa6.06□□□□□ -1.44
CCDC54-201ENST00000261058 LYSMD2Q8IV50 215 aa6.06□□□□□ -1.44
CCDC54-201ENST00000261058 SLC41A1Q8IVJ1 513 aa6.06□□□□□ -1.44
CCDC54-201ENST00000261058 TUBGCP5Q96RT8 1024 aa6.06□□□□□ -1.44
CCDC54-201ENST00000261058 CEP89Q96ST8 783 aa6.06□□□□□ -1.44
CCDC54-201ENST00000261058 PPP1R16BQ96T49 567 aa6.06□□□□□ -1.44
CCDC54-201ENST00000261058 PMF1-BGLAPU3KQ54 211 aa6.06□□□□□ -1.44
CCDC54-201ENST00000261058 S100BP04271 92 aaPredicted RBP6.05□□□□□ -1.44
CCDC54-201ENST00000261058 PFKMP08237 780 aa6.05□□□□□ -1.44
CCDC54-201ENST00000261058 APEX1P27695 318 aaKnown RBP6.05□□□□□ -1.44
CCDC54-201ENST00000261058 FZD5Q13467 585 aa6.05□□□□□ -1.44
CCDC54-201ENST00000261058 TTF1Q15361 905 aaPredicted RBP6.05□□□□□ -1.44
CCDC54-201ENST00000261058 TIGD7Q6NT04 549 aaPredicted RBP6.05□□□□□ -1.44
CCDC54-201ENST00000261058 ATG14Q6ZNE5 492 aa6.05□□□□□ -1.44
CCDC54-201ENST00000261058 C1orf162Q8NEQ5 155 aaPredicted RBP6.05□□□□□ -1.44
CCDC54-201ENST00000261058 ZBTB8AQ96BR9 441 aa6.05□□□□□ -1.44
CCDC54-201ENST00000261058 KLHL42Q9P2K6 505 aa6.05□□□□□ -1.44
CCDC54-201ENST00000261058 NUMBLQ9Y6R0 609 aa6.05□□□□□ -1.44
CCDC54-201ENST00000261058 WASHC2AQ641Q2 1341 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 PRSS38A1L453 326 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 SH3D21A4FU49 640 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 CYP7B1O75881 506 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 RBP3P10745 1247 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 ZNF28P17035 718 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 RPL13P26373 211 aaKnown RBP6.04□□□□□ -1.44
CCDC54-201ENST00000261058 EPHB1P54762 984 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 MLLT6P55198 1093 aaPredicted RBP6.04□□□□□ -1.44
CCDC54-201ENST00000261058 BCAR1P56945 870 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 SCAND1P57086 179 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 ADCY2Q08462 1091 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 PITRM1Q5JRX3 1037 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 PHF19Q5T6S3 580 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 PRAMEF9Q5VWM5 478 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 TMEM200BQ69YZ2 307 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 DPP8Q6V1X1 898 aaPredicted RBP6.04□□□□□ -1.44
CCDC54-201ENST00000261058 KCNK18Q7Z418 384 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 STPG3Q8N7X2 389 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 ZCCHC14Q8WYQ9 949 aaKnown RBP6.04□□□□□ -1.44
CCDC54-201ENST00000261058 CHMP4CQ96CF2 233 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 FUBP3Q96I24 572 aaKnown RBP eCLIP6.04□□□□□ -1.44
CCDC54-201ENST00000261058 ZSWIM3Q96MP5 696 aa6.04□□□□□ -1.44
CCDC54-201ENST00000261058 TACO1Q9BSH4 297 aaKnown RBP6.04□□□□□ -1.44
CCDC54-201ENST00000261058 CCM2LQ9NUG4 571 aaPredicted RBP6.04□□□□□ -1.44
CCDC54-201ENST00000261058 SMG5Q9UPR3 1016 aaKnown RBP6.04□□□□□ -1.44
CCDC54-201ENST00000261058 A0A0A6YYJ9 748 aa6.03□□□□□ -1.44
CCDC54-201ENST00000261058 SHTN1A0MZ66 631 aa6.03□□□□□ -1.44
CCDC54-201ENST00000261058 GOLGA8AA7E2F4 631 aa6.03□□□□□ -1.44
CCDC54-201ENST00000261058 GOLGA8BA8MQT2 603 aa6.03□□□□□ -1.44
CCDC54-201ENST00000261058 H2AFYO75367 372 aaKnown RBP6.03□□□□□ -1.44
CCDC54-201ENST00000261058 KLHL18O94889 574 aa6.03□□□□□ -1.44
CCDC54-201ENST00000261058 C1QTNF9P0C862 333 aa6.03□□□□□ -1.44
CCDC54-201ENST00000261058 PI3P19957 117 aa6.03□□□□□ -1.44
CCDC54-201ENST00000261058 GLRBP48167 497 aa6.03□□□□□ -1.44
CCDC54-201ENST00000261058 SMAD4Q13485 552 aaKnown RBP6.03□□□□□ -1.44
CCDC54-201ENST00000261058 NOLC1Q14978 699 aaKnown RBP eCLIP6.03□□□□□ -1.44
CCDC54-201ENST00000261058 ABCB5Q2M3G0 1257 aa6.03□□□□□ -1.44
CCDC54-201ENST00000261058 CNKSR3Q6P9H4 555 aa6.03□□□□□ -1.44
CCDC54-201ENST00000261058 BCL6BQ8N143 479 aaPredicted RBP6.03□□□□□ -1.44
CCDC54-201ENST00000261058 RSAD2Q8WXG1 361 aa6.03□□□□□ -1.44
CCDC54-201ENST00000261058 DACT3Q96B18 629 aaPredicted RBP6.03□□□□□ -1.44
CCDC54-201ENST00000261058 PRDM12Q9H4Q4 367 aa6.03□□□□□ -1.44
CCDC54-201ENST00000261058 ZNF277Q9NRM2 450 aaPredicted RBP6.03□□□□□ -1.44
CCDC54-201ENST00000261058 MYPNQ86TC9 1320 aa6.03□□□□□ -1.44
CCDC54-201ENST00000261058 CFBP00751 764 aa6.02□□□□□ -1.45
CCDC54-201ENST00000261058 MTNR1BP49286 362 aa6.02□□□□□ -1.45
CCDC54-201ENST00000261058 CD83Q01151 205 aa6.02□□□□□ -1.45
CCDC54-201ENST00000261058 NFATC3Q12968 1075 aa6.02□□□□□ -1.45
CCDC54-201ENST00000261058 BMP8AQ7Z5Y6 402 aa6.02□□□□□ -1.45
CCDC54-201ENST00000261058 SSH1Q8WYL5 1049 aa6.02□□□□□ -1.45
CCDC54-201ENST00000261058 FAXDC2Q96IV6 333 aa6.02□□□□□ -1.45
CCDC54-201ENST00000261058 PWWP2AQ96N64 755 aa6.02□□□□□ -1.45
CCDC54-201ENST00000261058 ANO3Q9BYT9 981 aa6.02□□□□□ -1.45
CCDC54-201ENST00000261058 MTG2Q9H4K7 406 aa6.02□□□□□ -1.45
CCDC54-201ENST00000261058 TCF7L1Q9HCS4 588 aa6.02□□□□□ -1.45
CCDC54-201ENST00000261058 KCMF1Q9P0J7 381 aa6.02□□□□□ -1.45
CCDC54-201ENST00000261058 KCNG1Q9UIX4 513 aa6.02□□□□□ -1.45
CCDC54-201ENST00000261058 FBXO10Q9UK96 956 aa6.02□□□□□ -1.45
CCDC54-201ENST00000261058 KCTD3Q9Y597 815 aa6.02□□□□□ -1.45
CCDC54-201ENST00000261058 TCAF2A6NFQ2 919 aa6.01□□□□□ -1.45
CCDC54-201ENST00000261058 PCDHGA12O60330 932 aa6.01□□□□□ -1.45
CCDC54-201ENST00000261058 OPHN1O60890 802 aa6.01□□□□□ -1.45
CCDC54-201ENST00000261058 CLEC2LP0C7M8 214 aa6.01□□□□□ -1.45
CCDC54-201ENST00000261058 LINC00310P59036 64 aa6.01□□□□□ -1.45
CCDC54-201ENST00000261058 MRPS9P82933 396 aaKnown RBP6.01□□□□□ -1.45
CCDC54-201ENST00000261058 NFE2Q16621 373 aaPredicted RBP6.01□□□□□ -1.45
CCDC54-201ENST00000261058 ZNF648Q5T619 568 aaPredicted RBP6.01□□□□□ -1.45
CCDC54-201ENST00000261058 RAVER1Q8IY67 606 aaKnown RBP6.01□□□□□ -1.45
CCDC54-201ENST00000261058 PPP1R14CQ8TAE6 165 aa6.01□□□□□ -1.45
CCDC54-201ENST00000261058 RPGRQ92834 1020 aaKnown RBP6.01□□□□□ -1.45
CCDC54-201ENST00000261058 CAMKK2Q96RR4 588 aa6.01□□□□□ -1.45
CCDC54-201ENST00000261058 SMAD5Q99717 465 aaKnown RBP6.01□□□□□ -1.45
CCDC54-201ENST00000261058 CNOT6Q9ULM6 557 aaKnown RBP6.01□□□□□ -1.45
CCDC54-201ENST00000261058 PCDHGA9Q9Y5G4 932 aaKnown RBP6.01□□□□□ -1.45
CCDC54-201ENST00000261058 PCDHGA8Q9Y5G5 932 aa6.01□□□□□ -1.45
CCDC54-201ENST00000261058 PCDHGA7Q9Y5G6 932 aa6.01□□□□□ -1.45
CCDC54-201ENST00000261058 PCDHGA6Q9Y5G7 932 aa6.01□□□□□ -1.45
CCDC54-201ENST00000261058 PCDHGA3Q9Y5H0 932 aa6.01□□□□□ -1.45
CCDC54-201ENST00000261058 PCDHGA2Q9Y5H1 932 aa6.01□□□□□ -1.45
CCDC54-201ENST00000261058 FFAR3O14843 346 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms