RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 C5orf60A6NFR6 353 aa20.64■□□□□ 0.89
SNX4-201ENST00000251775 PSMC6P62333 389 aa20.64■□□□□ 0.89
SNX4-201ENST00000251775 CUL1Q13616 776 aa20.64■□□□□ 0.89
SNX4-201ENST00000251775 KIAA0753Q2KHM9 967 aa20.64■□□□□ 0.89
SNX4-201ENST00000251775 DDX42Q86XP3 938 aaKnown RBP eCLIP20.64■□□□□ 0.89
SNX4-201ENST00000251775 LENG9Q96B70 501 aa20.64■□□□□ 0.89
SNX4-201ENST00000251775 CEP63Q96MT8 703 aa20.64■□□□□ 0.89
SNX4-201ENST00000251775 NUCKS1Q9H1E3 243 aaKnown RBP20.64■□□□□ 0.89
SNX4-201ENST00000251775 TDRD3Q9H7E2 651 aaKnown RBP20.64■□□□□ 0.89
SNX4-201ENST00000251775 HAUS2Q9NVX0 235 aa20.64■□□□□ 0.89
SNX4-201ENST00000251775 ODF2LQ9ULJ1 636 aa20.64■□□□□ 0.89
SNX4-201ENST00000251775 BHMG1C9JSJ3 638 aaPredicted RBP20.63■□□□□ 0.89
SNX4-201ENST00000251775 CTNNA1P35221 906 aaKnown RBP20.63■□□□□ 0.89
SNX4-201ENST00000251775 BIRC3Q13489 604 aa20.63■□□□□ 0.89
SNX4-201ENST00000251775 FBXO11Q86XK2 927 aa20.63■□□□□ 0.89
SNX4-201ENST00000251775 GMCL1P1Q8NEA9 526 aa20.63■□□□□ 0.89
SNX4-201ENST00000251775 SGSM3Q96HU1 749 aa20.63■□□□□ 0.89
SNX4-201ENST00000251775 EMILIN3Q9NT22 766 aa20.63■□□□□ 0.89
SNX4-201ENST00000251775 FRMD3A2A2Y4 597 aa20.63■□□□□ 0.89
SNX4-201ENST00000251775 BACH1O14867 736 aa20.63■□□□□ 0.89
SNX4-201ENST00000251775 SLC26A4O43511 780 aa20.63■□□□□ 0.89
SNX4-201ENST00000251775 NPM3O75607 178 aaKnown RBP20.63■□□□□ 0.89
SNX4-201ENST00000251775 RRP1BQ14684 758 aaKnown RBP20.63■□□□□ 0.89
SNX4-201ENST00000251775 SCFD2Q8WU76 684 aa20.63■□□□□ 0.89
SNX4-201ENST00000251775 N4BP2L2Q92802 583 aaPredicted RBP20.63■□□□□ 0.89
SNX4-201ENST00000251775 LRRC45Q96CN5 670 aa20.63■□□□□ 0.89
SNX4-201ENST00000251775 GMCL1Q96IK5 515 aa20.63■□□□□ 0.89
SNX4-201ENST00000251775 SERPINA10Q9UK55 444 aa20.63■□□□□ 0.89
SNX4-201ENST00000251775 FAM86B1E9PN63 330 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 KCNK3O14649 394 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 PAEPP09466 180 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 FAM86B2P0C5J1 330 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 HMGB2P26583 209 aaKnown RBP20.62■□□□□ 0.89
SNX4-201ENST00000251775 NF2P35240 595 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 POLR2FP61218 127 aaKnown RBP20.62■□□□□ 0.89
SNX4-201ENST00000251775 PPP2R2AP63151 447 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 SYDE2Q5VT97 1194 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 TRIM59Q8IWR1 403 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 RAPGEF5Q92565 580 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 LSM14BQ9BX40 385 aaKnown RBP20.62■□□□□ 0.89
SNX4-201ENST00000251775 ZHX3Q9H4I2 956 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 TPX2Q9ULW0 747 aaKnown RBP20.62■□□□□ 0.89
SNX4-201ENST00000251775 ATAD5Q96QE3 1844 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 MEIS1O00470 390 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 CES2O00748 559 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 KRT18P05783 430 aaKnown RBP20.62■□□□□ 0.89
SNX4-201ENST00000251775 SPATA31C1P0DKV0 1188 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 SCTRP47872 440 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 IKQ13123 557 aaPredicted RBP20.62■□□□□ 0.89
SNX4-201ENST00000251775 Q4G0T1 1027 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 RUFY4Q6ZNE9 571 aa20.62■□□□□ 0.89
SNX4-201ENST00000251775 BCCIPQ9P287 314 aaKnown RBP eCLIP20.62■□□□□ 0.89
SNX4-201ENST00000251775 OPLAHO14841 1288 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 PLSCR1O15162 318 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 APBA3O96018 575 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 GH2P01242 217 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 CASP5P51878 434 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 MARSP56192 900 aaKnown RBP20.61■□□□□ 0.89
SNX4-201ENST00000251775 LACTB2Q53H82 288 aaPredicted RBP20.61■□□□□ 0.89
SNX4-201ENST00000251775 AGBL2Q5U5Z8 902 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 CEP57Q86XR8 500 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 PROCA1Q8NCQ7 364 aaPredicted RBP20.61■□□□□ 0.89
SNX4-201ENST00000251775 TAF4BQ92750 862 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.61■□□□□ 0.89
SNX4-201ENST00000251775 ADAMTS1Q9UHI8 967 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 PITPNM2Q9BZ72 1349 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 SCP2P22307 547 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 FLT3P36888 993 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 SREBF1P36956 1147 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 RPS6KA1Q15418 735 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 AOC3Q16853 763 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 CACNA2D3Q8IZS8 1091 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 MAGEC3Q8TD91 643 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 FBXL5Q9UKA1 691 aa20.61■□□□□ 0.89
SNX4-201ENST00000251775 A0A1W2PRG0 241 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 SPDYE3A6NKU9 549 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 DCDC2CA8MYV0 355 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 TBX3O15119 743 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 GNA14O95837 355 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 IBSPP21815 317 aaPredicted RBP20.6■□□□□ 0.89
SNX4-201ENST00000251775 HOXA13P31271 388 aaPredicted RBP20.6■□□□□ 0.89
SNX4-201ENST00000251775 ARID5AQ03989 594 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 PABPC4Q13310 644 aaKnown RBP eCLIP20.6■□□□□ 0.897e-6■□□□□ 8.5
SNX4-201ENST00000251775 GIT2Q14161 759 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 CCDC50Q8IVM0 306 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 ZC3H3Q8IXZ2 948 aaKnown RBP20.6■□□□□ 0.89
SNX4-201ENST00000251775 TATDN2Q93075 761 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 VEZTQ9HBM0 779 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.6■□□□□ 0.89
SNX4-201ENST00000251775 TMCO5BA8MYB1 307 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 H0YIN7 160 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 KIF4AO95239 1232 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 BMP3P12645 472 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 CHRNA5P30532 468 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 XRCC4Q13426 336 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 ADAM9Q13443 819 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 ODF2Q5BJF6 829 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 GOLPH3Q9H4A6 298 aa20.6■□□□□ 0.89
SNX4-201ENST00000251775 NOVA2Q9UNW9 492 aaKnown RBP20.6■□□□□ 0.89
SNX4-201ENST00000251775 ATRNL1Q5VV63 1379 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms