RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 LZTS2Q9BRK4 669 aa15.7■□□□□ 0.1
DDX39A-201ENST00000242776 IRF2BPLQ9H1B7 796 aa15.7■□□□□ 0.1
DDX39A-201ENST00000242776 POMKQ9H5K3 350 aa15.7■□□□□ 0.1
DDX39A-201ENST00000242776 AGO4Q9HCK5 861 aaKnown RBP15.7■□□□□ 0.1
DDX39A-201ENST00000242776 GPR182O15218 404 aa15.69■□□□□ 0.1
DDX39A-201ENST00000242776 MAFGO15525 162 aa15.69■□□□□ 0.1
DDX39A-201ENST00000242776 KCNC3Q14003 757 aa15.69■□□□□ 0.1
DDX39A-201ENST00000242776 PDE12Q6L8Q7 609 aaKnown RBP15.69■□□□□ 0.1
DDX39A-201ENST00000242776 C12orf76Q8N812 135 aaPredicted RBP15.69■□□□□ 0.1
DDX39A-201ENST00000242776 NR2E1Q9Y466 385 aa15.69■□□□□ 0.1
DDX39A-201ENST00000242776 RBM8AQ9Y5S9 174 aaKnown RBP15.69■□□□□ 0.1
DDX39A-201ENST00000242776 SH2B2O14492 632 aaPredicted RBP15.68■□□□□ 0.1
DDX39A-201ENST00000242776 HBP1O60381 514 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 CCNE2O96020 404 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 SMARCA1P28370 1054 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 ZNF76P36508 570 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 MTMR3Q13615 1198 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 RARS2Q5T160 578 aaKnown RBP15.68■□□□□ 0.1
DDX39A-201ENST00000242776 PDXDC2PQ6P474 469 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 KCNT2Q6UVM3 1135 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 FRMD5Q7Z6J6 570 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 CCDC60Q8IWA6 550 aaPredicted RBP15.68■□□□□ 0.1
DDX39A-201ENST00000242776 ABI1Q8IZP0 508 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 ZNF558Q96NG5 402 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 MAP3K14Q99558 947 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 MFSD1Q9H3U5 465 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 ANO2Q9NQ90 1003 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 ZNF302Q9NR11 478 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 TMEM161AQ9NX61 479 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 NFASCO94856 1347 aa15.68■□□□□ 0.1
DDX39A-201ENST00000242776 FSD2A1L4K1 749 aa15.67■□□□□ 0.1
DDX39A-201ENST00000242776 PRR23AA6NEV1 266 aa15.67■□□□□ 0.1
DDX39A-201ENST00000242776 NT5C1B-RDH14C9J2C7 533 aa15.67■□□□□ 0.1
DDX39A-201ENST00000242776 NAPAP54920 295 aa15.67■□□□□ 0.1
DDX39A-201ENST00000242776 KRT17Q04695 432 aa15.67■□□□□ 0.1
DDX39A-201ENST00000242776 FAM160B1Q5W0V3 765 aa15.67■□□□□ 0.1
DDX39A-201ENST00000242776 WWC2Q6AWC2 1192 aa15.67■□□□□ 0.1
DDX39A-201ENST00000242776 CES5AQ6NT32 575 aa15.67■□□□□ 0.1
DDX39A-201ENST00000242776 SWSAP1Q6NVH7 229 aa15.67■□□□□ 0.1
DDX39A-201ENST00000242776 TMEM184AQ6ZMB5 413 aa15.67■□□□□ 0.1
DDX39A-201ENST00000242776 MICU3Q86XE3 530 aa15.67■□□□□ 0.1
DDX39A-201ENST00000242776 CASD1Q96PB1 797 aa15.67■□□□□ 0.1
DDX39A-201ENST00000242776 SORCS3Q9UPU3 1222 aa15.67■□□□□ 0.1
DDX39A-201ENST00000242776 HCFC2Q9Y5Z7 792 aa15.67■□□□□ 0.1
DDX39A-201ENST00000242776 EPB41L2O43491 1005 aaKnown RBP15.66■□□□□ 0.1
DDX39A-201ENST00000242776 METAP2P50579 478 aaKnown RBP eCLIP15.66■□□□□ 0.1
DDX39A-201ENST00000242776 CRYBB1P53674 252 aaPredicted RBP15.66■□□□□ 0.1
DDX39A-201ENST00000242776 PLCB3Q01970 1234 aa15.66■□□□□ 0.1
DDX39A-201ENST00000242776 TPRNQ4KMQ1 711 aa15.66■□□□□ 0.1
DDX39A-201ENST00000242776 ODR4Q5SWX8 454 aa15.66■□□□□ 0.1
DDX39A-201ENST00000242776 FLCNQ8NFG4 579 aa15.66■□□□□ 0.1
DDX39A-201ENST00000242776 FEZF2Q8TBJ5 459 aa15.66■□□□□ 0.1
DDX39A-201ENST00000242776 AUTS2Q8WXX7 1259 aa15.66■□□□□ 0.1
DDX39A-201ENST00000242776 CASP10Q92851 521 aa15.66■□□□□ 0.1
DDX39A-201ENST00000242776 ANO3Q9BYT9 981 aa15.66■□□□□ 0.1
DDX39A-201ENST00000242776 TMEM117Q9H0C3 514 aa15.66■□□□□ 0.1
DDX39A-201ENST00000242776 UPF2Q9HAU5 1272 aaKnown RBP15.66■□□□□ 0.1
DDX39A-201ENST00000242776 RNF19AQ9NV58 838 aa15.66■□□□□ 0.1
DDX39A-201ENST00000242776 RNF216Q9NWF9 866 aaPredicted RBP15.66■□□□□ 0.1
DDX39A-201ENST00000242776 LIMD1Q9UGP4 676 aa15.66■□□□□ 0.1
DDX39A-201ENST00000242776 LZTS1Q9Y250 596 aa15.66■□□□□ 0.1
DDX39A-201ENST00000242776 SLC12A7Q9Y666 1083 aa15.66■□□□□ 0.1
DDX39A-201ENST00000242776 WDR81Q562E7 1941 aa15.66■□□□□ 0.1
DDX39A-201ENST00000242776 CLASP2O75122 1294 aaKnown RBP15.65■□□□□ 0.1
DDX39A-201ENST00000242776 ATG7O95352 703 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 HOXB8P17481 243 aaPredicted RBP15.65■□□□□ 0.1
DDX39A-201ENST00000242776 ATP4AP20648 1035 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 FGFR4P22455 802 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 CLCN3P51790 818 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 CEP55Q53EZ4 464 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 TYW1BQ6NUM6 668 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 ABHD15Q6UXT9 468 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 TMTC3Q6ZXV5 915 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 NGRNQ9NPE2 291 aaKnown RBP15.65■□□□□ 0.1
DDX39A-201ENST00000242776 SPG21Q9NZD8 308 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 AKT3Q9Y243 479 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 RIF1Q5UIP0 2472 aaKnown RBP15.65■□□□□ 0.1
DDX39A-201ENST00000242776 FAM186AA6NE01 2351 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 ZBTB42B2RXF5 422 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 GPR32O75388 356 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 MCM5P33992 734 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 SLC26A2P50443 739 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 ADCY7P51828 1080 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 FAM189BP81408 668 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 DSC3Q14574 896 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 SMC1AQ14683 1233 aaKnown RBP15.65■□□□□ 0.1
DDX39A-201ENST00000242776 LONRF3Q496Y0 759 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 ZNF484Q5JVG2 852 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 MIS18BP1Q6P0N0 1132 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 PLA2G4DQ86XP0 818 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 UBALD2Q8IYN6 164 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 LRRC43Q8N309 656 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 LRRC71Q8N4P6 559 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 TDRD5Q8NAT2 981 aaKnown RBP15.65■□□□□ 0.1
DDX39A-201ENST00000242776 TMEM87AQ8NBN3 555 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 RASGRP4Q8TDF6 673 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 HELQQ8TDG4 1101 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 BACH2Q9BYV9 841 aa15.65■□□□□ 0.1
DDX39A-201ENST00000242776 LSG1Q9H089 658 aaKnown RBP15.65■□□□□ 0.1
DDX39A-201ENST00000242776 ADAM7Q9H2U9 754 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms