RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 CCDC40Q4G0X9 1142 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 VWA3BQ502W6 1294 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 FKBP15Q5T1M5 1219 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 GPR142Q7Z601 462 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 ZNF467Q7Z7K2 595 aaPredicted RBP19.99■□□□□ 0.79
VIM-201ENST00000224237 TC2NQ8N9U0 490 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 SLC17A8Q8NDX2 589 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 K7ENM7 598 aa19.98■□□□□ 0.79
VIM-201ENST00000224237 PPP1R37O75864 691 aa19.98■□□□□ 0.79
VIM-201ENST00000224237 DGAT1O75907 488 aa19.98■□□□□ 0.79
VIM-201ENST00000224237 RPL13P26373 211 aaKnown RBP19.98■□□□□ 0.79
VIM-201ENST00000224237 TBC1D8BQ0IIM8 1120 aa19.98■□□□□ 0.79
VIM-201ENST00000224237 ZC2HC1CQ53FD0 456 aaPredicted RBP19.98■□□□□ 0.79
VIM-201ENST00000224237 ARMCX2Q7L311 632 aa19.98■□□□□ 0.79
VIM-201ENST00000224237 CNGA4Q8IV77 575 aa19.98■□□□□ 0.79
VIM-201ENST00000224237 SMC1BQ8NDV3 1235 aa19.98■□□□□ 0.79
VIM-201ENST00000224237 ZIC5Q96T25 663 aa19.98■□□□□ 0.79
VIM-201ENST00000224237 STRA6Q9BX79 667 aa19.98■□□□□ 0.79
VIM-201ENST00000224237 TMX1Q9H3N1 280 aa19.98■□□□□ 0.79
VIM-201ENST00000224237 CYP26B1Q9NR63 512 aa19.98■□□□□ 0.79
VIM-201ENST00000224237 ADGRA2Q96PE1 1338 aa19.98■□□□□ 0.79
VIM-201ENST00000224237 ZMYM2Q9UBW7 1377 aa19.98■□□□□ 0.79
VIM-201ENST00000224237 GSTTP1A0A1W2PQM5 241 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 ARIH2O95376 493 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 GYPCP04921 128 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 RBL2Q08999 1139 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 KCNA1Q09470 495 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 GRM1Q13255 1194 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 GRB14Q14449 540 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 TTLL4Q14679 1199 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 TAF1CQ15572 869 aaPredicted RBP19.97■□□□□ 0.79
VIM-201ENST00000224237 NFIL3Q16649 462 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 FAM160B1Q5W0V3 765 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 CEP135Q66GS9 1140 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 MCPH1Q8NEM0 835 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 SEPT1Q8WYJ6 367 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 NDST4Q9H3R1 872 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 C17orf75Q9HAS0 396 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 SPTLC3Q9NUV7 552 aa19.97■□□□□ 0.79
VIM-201ENST00000224237 OFD1O75665 1012 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 OATP04181 439 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 KCNJ6P48051 423 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 ADKP55263 362 aaKnown RBP19.96■□□□□ 0.79
VIM-201ENST00000224237 CELF3Q5SZQ8 465 aaKnown RBP19.96■□□□□ 0.79
VIM-201ENST00000224237 FAM102BQ5T8I3 360 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 CCDC62Q6P9F0 684 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 HS2ST1Q7LGA3 356 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 AFAP1L1Q8TED9 768 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 SCFD2Q8WU76 684 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 KIFAP3Q92845 792 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 ERGIC2Q96RQ1 377 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 NKRFO15226 690 aaKnown RBP eCLIP19.96■□□□□ 0.79
VIM-201ENST00000224237 TGFB1I1O43294 461 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 MFAP3LO75121 409 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 NR3C1P04150 777 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 TCF7P36402 384 aaPredicted RBP19.96■□□□□ 0.79
VIM-201ENST00000224237 GOLGA8FQ08AF8 430 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 GOLGA8DPQ0D2H9 430 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 TMEM63BQ5T3F8 832 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 PLEKHH3Q7Z736 793 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 IFNL1Q8IU54 200 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 C17orf53Q8N3J3 647 aaPredicted RBP19.96■□□□□ 0.79
VIM-201ENST00000224237 GOLGA5Q8TBA6 731 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 CCDC51Q96ER9 411 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 PANX2Q96RD6 677 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 GBP3Q9H0R5 595 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 ST6GALNAC4Q9H4F1 302 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 GPRC5CQ9NQ84 441 aa19.96■□□□□ 0.79
VIM-201ENST00000224237 ZNF236Q9UL36 1845 aa19.95■□□□□ 0.78
VIM-201ENST00000224237 NOP56O00567 594 aaKnown RBP19.95■□□□□ 0.78
VIM-201ENST00000224237 ATP4AP20648 1035 aa19.95■□□□□ 0.78
VIM-201ENST00000224237 CASP14P31944 242 aa19.95■□□□□ 0.78
VIM-201ENST00000224237 INHBEP58166 350 aa19.95■□□□□ 0.78
VIM-201ENST00000224237 DPP9Q86TI2 863 aa19.95■□□□□ 0.78
VIM-201ENST00000224237 TMEM206Q9H813 350 aa19.95■□□□□ 0.78
VIM-201ENST00000224237 ATP6V0A4Q9HBG4 840 aa19.95■□□□□ 0.78
VIM-201ENST00000224237 VTA1Q9NP79 307 aa19.95■□□□□ 0.78
VIM-201ENST00000224237 DIS3Q9Y2L1 958 aaKnown RBP19.95■□□□□ 0.78
VIM-201ENST00000224237 SLC16A3O15427 465 aaKnown RBP19.94■□□□□ 0.78
VIM-201ENST00000224237 STX10O60499 249 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 TXNP10599 105 aaKnown RBP19.94■□□□□ 0.78
VIM-201ENST00000224237 STAT5BP51692 787 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 SMTNP53814 917 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 NCKAP1LP55160 1127 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 PEX3P56589 373 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 DMP1Q13316 513 aaPredicted RBP19.94■□□□□ 0.78
VIM-201ENST00000224237 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.94■□□□□ 0.78
VIM-201ENST00000224237 FRMD5Q7Z6J6 570 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 TRIM59Q8IWR1 403 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 RETREG2Q8NC44 543 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 PCYT2Q99447 389 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 BAG1Q99933 345 aaPredicted RBP19.94■□□□□ 0.78
VIM-201ENST00000224237 NUP58Q9BVL2 599 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 AZI2Q9H6S1 392 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 PDLIM7Q9NR12 457 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 PDGFCQ9NRA1 345 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 FAM184BQ9ULE4 1060 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 RTP1P59025 263 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 GTF2BQ00403 316 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 SYCP1Q15431 976 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms