RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Ggps1Q9WTN0 300 aa17.12■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Slc12a7Q9WVL3 1083 aa17.12■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Arrdc4A0A0B4J1F4 415 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Gm11549A0A286YD83 63 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 EdnrbP48302 442 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Irf3P70671 419 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Edem3Q2HXL6 931 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 OsbpQ3B7Z2 805 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Ap5z1Q3U829 807 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Kiaa1211Q5PR69 1207 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Krt31Q61765 416 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Plppr4Q7TME0 766 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Etf1Q8BWY3 437 aaKnown RBP17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Vps52Q8C754 723 aaKnown RBP17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Mbtps2Q8CHX6 515 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Stoml1Q8CI66 399 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Phldb2Q8K1N2 1249 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Znf131Q8K3J5 619 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 CbsQ91WT9 561 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Galnt15Q9D2N8 638 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Klra10Q9R1G6 266 aa17.11■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Scgb2b11A0A087WR49 112 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Hps5P59438 1126 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Lpar1P61793 364 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Mex3cQ05A36 652 aaKnown RBP17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Mcph1Q7TT79 822 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Dusp4Q8BFV3 398 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Pxylp1Q8BHA9 480 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Klhl20Q8VCK5 604 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Atp1a1Q8VDN2 1023 aaKnown RBP17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Ppp1r3aQ99MR9 1089 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Fam217aQ9D9W6 419 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Tbx20Q9ES03 445 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Astn1Q61137 1302 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Olfr67F8VPJ8 320 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Cyth3O08967 399 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Tnfrsf11aO35305 625 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Ap1b1O35643 943 aaKnown RBP17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Kcna3P16390 528 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 GcP21614 476 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Lta4hP24527 611 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Zbtb5Q7TQG0 670 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Maip1Q8BHE8 291 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Mxra8Q9DBV4 442 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Ipo7Q9EPL8 1038 aaKnown RBP17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Irx4Q9QY61 515 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Ercc4Q9QZD4 917 aa17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Twf2Q9Z0P5 349 aaKnown RBP17.1■□□□□ 0.33
Ubp1-206ENSMUST00000216558 A0A286YCQ6 122 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 EmbP21995 330 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 StamP70297 548 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 RenbpP82343 430 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Kmt5aQ2YDW7 349 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Capn13Q3UW68 665 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Oog4Q4G0C7 502 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Shc3Q61120 474 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Zbtb7bQ64321 544 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Ppp2r5aQ6PD03 486 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Rab11fip4Q8BQP8 635 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Pdcl3Q8BVF2 240 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Ppme1Q8BVQ5 386 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 BrdtQ91Y44 956 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 NptxrQ99J85 493 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Znf687Q9D2D7 1237 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 Atad5Q4QY64 1826 aa17.09■□□□□ 0.33
Ubp1-206ENSMUST00000216558 PurbO35295 324 aaKnown RBP17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Men1O88559 611 aaKnown RBP17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Tcerg1lQ3B807 590 aa17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Dcaf17Q3TUL7 519 aa17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Atp13a4Q5XF90 1193 aa17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Lrrn2Q6PHP6 730 aa17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Ubap2lQ80X50 1107 aaKnown RBP17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Usp37Q8C0R0 979 aa17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Tmem161bQ8C2L6 487 aa17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Atp2a1Q8R429 994 aa17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Ccdc43Q9CR29 222 aaKnown RBP17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Emc2Q9CRD2 297 aa17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Katnbl1Q9CWJ3 299 aa17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Elp3Q9CZX0 547 aa17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Erp44Q9D1Q6 406 aa17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Spock2Q9ER58 423 aa17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Mtmr1Q9Z2C4 669 aa17.08■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Nfxl1E9Q8I7 918 aaKnown RBP17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Clk2O35491 499 aa17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Trdmt1O55055 415 aa17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Rad23aP54726 363 aa17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 LxnP70202 222 aa17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Miga1Q4QQM5 600 aa17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Cd37Q61470 281 aa17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 GartQ64737 1010 aa17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Hdac10Q6P3E7 666 aa17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 RragaQ80X95 313 aa17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Tdp1Q8BJ37 609 aa17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Frat2Q8K025 231 aa17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Ino80bQ99PT3 375 aaKnown RBP17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 PorcnQ9JJJ7 461 aa17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Tlr5Q9JLF7 859 aa17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Adgra2Q91ZV8 1336 aa17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Gm28042B7ZCM9 1014 aa17.07■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Gimap9G3X987 291 aa17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 88.6 ms