RNA–Protein interactions for RNA: YPL057C

SUR1, Transcript of Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit, yeastyeast

Gene SUR1, Length 1,149 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUR1YPL057C YDL186WP48568 277 aa3.3□□□□□ -1.88
SUR1YPL057C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
SUR1YPL057C CAB5Q03941 241 aa3.3□□□□□ -1.88
SUR1YPL057C NDE2Q07500 545 aa3.3□□□□□ -1.88
SUR1YPL057C YOL075CQ08234 1294 aa3.3□□□□□ -1.88
SUR1YPL057C GDH1P07262 454 aaKnown RBP3.29□□□□□ -1.88
SUR1YPL057C PHA2P32452 334 aa3.29□□□□□ -1.88
SUR1YPL057C TIR2P33890 251 aa3.29□□□□□ -1.88
SUR1YPL057C VPS45P38932 577 aa3.29□□□□□ -1.88
SUR1YPL057C ABM1P47146 123 aa3.29□□□□□ -1.88
SUR1YPL057C MSO1P53604 210 aaKnown RBP3.29□□□□□ -1.88
SUR1YPL057C TRM112P53738 135 aaPredicted RBP3.29□□□□□ -1.88
SUR1YPL057C COS1P53822 381 aa3.29□□□□□ -1.88
SUR1YPL057C YLR413WQ06689 675 aa3.29□□□□□ -1.88
SUR1YPL057C SHS1Q07657 551 aa3.29□□□□□ -1.88
SUR1YPL057C PPT2Q12036 173 aa3.29□□□□□ -1.88
SUR1YPL057C YLR108CQ12259 485 aa3.29□□□□□ -1.88
SUR1YPL057C APC2Q12440 853 aa3.29□□□□□ -1.88
SUR1YPL057C RGS2Q99188 309 aa3.29□□□□□ -1.88
SUR1YPL057C MXR2P25566 168 aa3.28□□□□□ -1.88
SUR1YPL057C YPS1P32329 569 aa3.28□□□□□ -1.88
SUR1YPL057C ZUO1P32527 433 aaKnown RBP3.28□□□□□ -1.88
SUR1YPL057C SBE22P38814 852 aa3.28□□□□□ -1.88
SUR1YPL057C COX14P39103 70 aa3.28□□□□□ -1.88
SUR1YPL057C IDP2P41939 412 aa3.28□□□□□ -1.88
SUR1YPL057C YFL067WP43537 175 aa3.28□□□□□ -1.88
SUR1YPL057C NCA3P46955 337 aa3.28□□□□□ -1.88
SUR1YPL057C RIB4P50861 169 aaPredicted RBP3.28□□□□□ -1.88
SUR1YPL057C NAT4Q04751 285 aa3.28□□□□□ -1.88
SUR1YPL057C MRPL35Q06678 367 aa3.28□□□□□ -1.88
SUR1YPL057C MDM36Q06820 579 aa3.28□□□□□ -1.88
SUR1YPL057C APC5Q08683 685 aa3.28□□□□□ -1.88
SUR1YPL057C HNT3Q08702 217 aa3.28□□□□□ -1.88
SUR1YPL057C AHC1Q12433 566 aa3.28□□□□□ -1.88
SUR1YPL057C RPL18AP0CX49 186 aaKnown RBP3.27□□□□□ -1.89
SUR1YPL057C RPL18BP0CX50 186 aaKnown RBP3.27□□□□□ -1.89
SUR1YPL057C SAR1P20606 190 aaKnown RBP3.27□□□□□ -1.89
SUR1YPL057C CIN8P27895 1000 aa3.27□□□□□ -1.89
SUR1YPL057C AGA1P32323 725 aa3.27□□□□□ -1.89
SUR1YPL057C MRPS5P33759 307 aa3.27□□□□□ -1.89
SUR1YPL057C AVT5P38176 459 aa3.27□□□□□ -1.89
SUR1YPL057C PEX32P38292 413 aa3.27□□□□□ -1.89
SUR1YPL057C YHK8P38776 514 aa3.27□□□□□ -1.89
SUR1YPL057C BTT1P40314 149 aaPredicted RBP3.27□□□□□ -1.89
SUR1YPL057C SEC27P41811 889 aaKnown RBP3.27□□□□□ -1.89
SUR1YPL057C WWM1P43582 211 aaKnown RBP3.27□□□□□ -1.89
SUR1YPL057C PNC1P53184 216 aaKnown RBP3.27□□□□□ -1.89
SUR1YPL057C RPN14P53196 417 aa3.27□□□□□ -1.89
SUR1YPL057C DBP6P53734 629 aaKnown RBP3.27□□□□□ -1.89
SUR1YPL057C YMR111CQ04461 462 aaPredicted RBP3.27□□□□□ -1.89
SUR1YPL057C ECM18Q04623 453 aa3.27□□□□□ -1.89
SUR1YPL057C RRG8Q06109 277 aa3.27□□□□□ -1.89
SUR1YPL057C VAC14Q06708 880 aa3.27□□□□□ -1.89
SUR1YPL057C GAT3Q07928 141 aa3.27□□□□□ -1.89
SUR1YPL057C MRPL23Q12487 163 aaPredicted RBP3.27□□□□□ -1.89
SUR1YPL057C DCP1Q12517 231 aaPredicted RBP3.27□□□□□ -1.89
SUR1YPL057C REV1P12689 985 aa3.26□□□□□ -1.89
SUR1YPL057C MSS116P15424 664 aaKnown RBP3.26□□□□□ -1.89
SUR1YPL057C UGA1P17649 471 aa3.26□□□□□ -1.89
SUR1YPL057C FAR1P21268 830 aa3.26□□□□□ -1.89
SUR1YPL057C BUD2P33314 1104 aa3.26□□□□□ -1.89
SUR1YPL057C AIP1P46680 615 aaKnown RBP3.26□□□□□ -1.89
SUR1YPL057C MRM2P53123 320 aa3.26□□□□□ -1.89
SUR1YPL057C LST7P53237 242 aa3.26□□□□□ -1.89
SUR1YPL057C VOA1P53262 265 aa3.26□□□□□ -1.89
SUR1YPL057C SPO19Q03029 223 aa3.26□□□□□ -1.89
SUR1YPL057C ESA1Q08649 445 aa3.26□□□□□ -1.89
SUR1YPL057C YRM1Q12340 786 aa3.26□□□□□ -1.89
SUR1YPL057C PAA1Q12447 191 aaKnown RBP3.26□□□□□ -1.89
SUR1YPL057C MEX67Q99257 599 aaKnown RBP3.26□□□□□ -1.89
SUR1YPL057C TRP1P00912 224 aa3.25□□□□□ -1.89
SUR1YPL057C SUP35P05453 685 aaKnown RBP3.25□□□□□ -1.89
SUR1YPL057C CYC3P06182 269 aa3.25□□□□□ -1.89
SUR1YPL057C CBS2P14905 389 aa3.25□□□□□ -1.89
SUR1YPL057C ARF2P19146 181 aaKnown RBP3.25□□□□□ -1.89
SUR1YPL057C UTR1P21373 530 aa3.25□□□□□ -1.89
SUR1YPL057C CPR4P25334 318 aa3.25□□□□□ -1.89
SUR1YPL057C DPH5P32469 300 aaPredicted RBP3.25□□□□□ -1.89
SUR1YPL057C RAD5P32849 1169 aaPredicted RBP3.25□□□□□ -1.89
SUR1YPL057C PAD1P33751 242 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
SUR1YPL057C ATG7P38862 630 aa3.25□□□□□ -1.89
SUR1YPL057C YHR182WP38870 785 aa3.25□□□□□ -1.89
SUR1YPL057C RBG1P39729 369 aa3.25□□□□□ -1.89
SUR1YPL057C PRM5P40476 318 aa3.25□□□□□ -1.89
SUR1YPL057C YIL029CP40538 142 aa3.25□□□□□ -1.89
SUR1YPL057C GCD14P46959 383 aaPredicted RBP3.25□□□□□ -1.89
SUR1YPL057C LOH1P47055 219 aa3.25□□□□□ -1.89
SUR1YPL057C MTM1P53320 366 aa3.25□□□□□ -1.89
SUR1YPL057C NUP116Q02630 1113 aa3.25□□□□□ -1.89
SUR1YPL057C YMR102CQ03177 834 aa3.25□□□□□ -1.89
SUR1YPL057C PRM6Q04705 352 aa3.25□□□□□ -1.89
SUR1YPL057C BUR2Q05949 395 aa3.25□□□□□ -1.89
SUR1YPL057C LOT6Q07923 191 aa3.25□□□□□ -1.89
SUR1YPL057C EAF3Q12432 401 aa3.25□□□□□ -1.89
SUR1YPL057C YCR024C-BQ3E7Z8 88 aa3.25□□□□□ -1.89
SUR1YPL057C YCL021W-AQ96VH3 125 aa3.25□□□□□ -1.89
SUR1YPL057C DET1Q99288 334 aaKnown RBP3.25□□□□□ -1.89
SUR1YPL057C PIS1P06197 220 aaKnown RBP3.24□□□□□ -1.89
SUR1YPL057C CAR2P07991 424 aaKnown RBP3.24□□□□□ -1.89
SUR1YPL057C VMA5P31412 392 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms