RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC9	YGR009C	ERD2	P18414	219 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	GAP1	P19145	602 aa	Predicted RBP	4.62	□□□□□ -1.67
SEC9	YGR009C	IDP1	P21954	428 aa	Known RBP	4.62	□□□□□ -1.67
SEC9	YGR009C	SLY41	P22215	453 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	RPS1B	P23248	255 aa	Known RBP	4.62	□□□□□ -1.67
SEC9	YGR009C	MRP20	P32387	263 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	YBL086C	P38177	466 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	ERV46	P39727	415 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	FIR1	P40020	876 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	YIL067C	P40514	678 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	HXT9	P40885	567 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	MID1	P41821	548 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	PFA3	P42836	336 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	YGR210C	P42942	411 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	YFR057W	P43625	151 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	GLO1	P50107	326 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	YNR062C	P53748	327 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	COG5	P53951	403 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	HXT11	P54862	567 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	NUP49	Q02199	472 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	FRK1	Q03002	865 aa	Predicted RBP	4.62	□□□□□ -1.67
SEC9	YGR009C	YDR387C	Q04162	555 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	YDR391C	Q04170	232 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	DPP1	Q05521	289 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	PEX10	Q05568	337 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	ENT4	Q07872	247 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	YPL257W	Q08974	193 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	DGK1	Q12382	290 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	TRM13	Q12383	476 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.62	□□□□□ -1.67
SEC9	YGR009C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SEC9	YGR009C	NAM2	P11325	894 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	EXG1	P23776	448 aa	Known RBP	4.62	□□□□□ -1.67
SEC9	YGR009C	MGR1	P25573	417 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	TRR1	P29509	319 aa	Known RBP	4.62	□□□□□ -1.67
SEC9	YGR009C	CYS3	P31373	394 aa	Known RBP	4.62	□□□□□ -1.67
SEC9	YGR009C	NTH1	P32356	751 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	ECT1	P33412	323 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	WBP1	P33767	430 aa	Known RBP	4.62	□□□□□ -1.67
SEC9	YGR009C	LST4	P34239	828 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	TRM5	P38793	499 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	ATG7	P38862	630 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	PGD1	P40356	397 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	SDP1	P40479	209 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	SEC24	P40482	926 aa	Known RBP	4.62	□□□□□ -1.67
SEC9	YGR009C	IME4	P41833	600 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	YPT11	P48559	417 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	COG7	P53195	279 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	TPS1	Q00764	495 aa	Known RBP	4.62	□□□□□ -1.67
SEC9	YGR009C	ACL4	Q03771	387 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	YDR124W	Q04608	324 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	YDR344C	Q05510	147 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	DUS4	Q06063	367 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	YPR196W	Q06595	470 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	GAS5	Q08193	484 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SEC9	YGR009C	DAP1	Q12091	152 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	YKL183C-A	Q3E765	70 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	YSP2	Q06681	1438 aa		4.62	□□□□□ -1.67
SEC9	YGR009C	FLP1	P03870	423 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	TPK2	P06245	380 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	HIP1	P06775	603 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	ATP1	P07251	545 aa	Known RBP	4.61	□□□□□ -1.67
SEC9	YGR009C	HAP1	P0CE41	1502 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	ATP10	P18496	279 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	KIN82	P25341	720 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	RFA3	P26755	122 aa	Known RBP	4.61	□□□□□ -1.67
SEC9	YGR009C	GSY2	P27472	705 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	YPT7	P32939	208 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	VRP1	P37370	817 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	PRS4	P38063	326 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC9	YGR009C	ECM21	P38167	1117 aa	Known RBP	4.61	□□□□□ -1.67
SEC9	YGR009C	MIC12	P38341	106 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	COS8	P38723	381 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	VMA7	P39111	118 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	PAC2	P39937	518 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	FAU1	P40099	211 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	LAS21	P40367	830 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	RRT14	P40470	206 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	DPB11	P47027	764 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC9	YGR009C	BIR1	P47134	954 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	YJR124C	P47159	448 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	LYS20	P48570	428 aa	Known RBP	4.61	□□□□□ -1.67
SEC9	YGR009C	YPT32	P51996	222 aa	Known RBP	4.61	□□□□□ -1.67
SEC9	YGR009C	YDR179W-A	Q03983	463 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	GMC1	Q04399	608 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	BER1	Q06688	274 aa	Known RBP	4.61	□□□□□ -1.67
SEC9	YGR009C	USB1	Q12208	290 aa	Known RBP	4.61	□□□□□ -1.67
SEC9	YGR009C	YLR046C	Q12253	270 aa		4.61	□□□□□ -1.67
SEC9	YGR009C	AUS1	Q08409	1394 aa		4.6	□□□□□ -1.67
SEC9	YGR009C	ARG82	P07250	355 aa		4.6	□□□□□ -1.67
SEC9	YGR009C	SEC59	P20048	519 aa		4.6	□□□□□ -1.67
SEC9	YGR009C	MSN1	P22148	382 aa		4.6	□□□□□ -1.67
SEC9	YGR009C	YSR3	P23501	404 aa		4.6	□□□□□ -1.67
SEC9	YGR009C	RNP1	P32385	249 aa		4.6	□□□□□ -1.67
SEC9	YGR009C	RAD23	P32628	398 aa	Known RBP	4.6	□□□□□ -1.67
SEC9	YGR009C	SKG6	P32900	734 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC9	YGR009C	RPC25	P35718	212 aa		4.6	□□□□□ -1.67
SEC9	YGR009C	YKR078W	P36158	585 aa	Known RBP	4.6	□□□□□ -1.67
SEC9	YGR009C	REG2	P38232	338 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms