RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PVALEFA0A1B0GWK0 134 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 MAFGO15525 162 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 CABYRO75952 493 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 TECP42680 631 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 HSD17B4P51659 736 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 DPYDQ12882 1025 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 UBE2SQ16763 222 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 CCDC144BQ3MJ40 725 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 HYIQ5T013 277 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 PDXDC2PQ6P474 469 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 USP17L6PQ6QN14 398 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 SV2BQ7L1I2 683 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 ZNF467Q7Z7K2 595 aaPredicted RBP19.18■□□□□ 0.66
PHGDH-234ENST00000642041 MRFAP1L1Q96HT8 127 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 TEX13BQ9BXU2 312 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 PANK2Q9BZ23 570 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 ABHD16BQ9H3Z7 469 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 LMCD1Q9NZU5 365 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 ZNF214Q9UL59 606 aaPredicted RBP19.18■□□□□ 0.66
PHGDH-234ENST00000642041 ZDBF2Q9HCK1 2354 aa19.18■□□□□ 0.66
PHGDH-234ENST00000642041 DNAJC25-GNG10A0A024R161 153 aa19.17■□□□□ 0.66
PHGDH-234ENST00000642041 LPXNO60711 386 aa19.17■□□□□ 0.66
PHGDH-234ENST00000642041 ADCY5O95622 1261 aa19.17■□□□□ 0.66
PHGDH-234ENST00000642041 PTMAP06454 111 aaKnown RBP19.17■□□□□ 0.66
PHGDH-234ENST00000642041 SSTR3P32745 418 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-234ENST00000642041 PSMD2Q13200 908 aa19.17■□□□□ 0.66
PHGDH-234ENST00000642041 ITGA7Q13683 1181 aa19.17■□□□□ 0.66
PHGDH-234ENST00000642041 IL17AQ16552 155 aa19.17■□□□□ 0.66
PHGDH-234ENST00000642041 REPS2Q8NFH8 660 aa19.17■□□□□ 0.66
PHGDH-234ENST00000642041 PHOSPHO2Q8TCD6 241 aa19.17■□□□□ 0.66
PHGDH-234ENST00000642041 SCLYQ96I15 445 aa19.17■□□□□ 0.66
PHGDH-234ENST00000642041 AGBL1Q96MI9 1066 aa19.17■□□□□ 0.66
PHGDH-234ENST00000642041 SLC9A7Q96T83 725 aa19.17■□□□□ 0.66
PHGDH-234ENST00000642041 WDR11Q9BZH6 1224 aa19.17■□□□□ 0.66
PHGDH-234ENST00000642041 TRIM5Q9C035 493 aa19.17■□□□□ 0.66
PHGDH-234ENST00000642041 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-234ENST00000642041 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-234ENST00000642041 WNT7AO00755 349 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 STAM2O75886 525 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 ARHGEF15O94989 841 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 KIF20AO95235 890 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 CFBP00751 764 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 LEXMQ3ZCV2 418 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 ZNF658Q5TYW1 1059 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-234ENST00000642041 LUZP1Q86V48 1076 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 CPXCR1Q8N123 301 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 NEK9Q8TD19 979 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 CTAGE1Q96RT6 745 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 C7orf25Q9BPX7 421 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 TRPV6Q9H1D0 765 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 UBE2ZQ9H832 354 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-234ENST00000642041 RAVER2Q9HCJ3 691 aaKnown RBP19.16■□□□□ 0.66
PHGDH-234ENST00000642041 FBXO40Q9UH90 709 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 MAN1B1Q9UKM7 699 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 ZNF536O15090 1300 aa19.16■□□□□ 0.66
PHGDH-234ENST00000642041 B4DLN1 442 aa19.15■□□□□ 0.66
PHGDH-234ENST00000642041 DCXO43602 365 aa19.15■□□□□ 0.66
PHGDH-234ENST00000642041 B4GALT4O60513 344 aa19.15■□□□□ 0.66
PHGDH-234ENST00000642041 COBLL1Q53SF7 1204 aa19.15■□□□□ 0.66
PHGDH-234ENST00000642041 SNRNP48Q6IEG0 339 aaKnown RBP19.15■□□□□ 0.66
PHGDH-234ENST00000642041 CXCL17Q6UXB2 119 aa19.15■□□□□ 0.66
PHGDH-234ENST00000642041 USP49Q70CQ1 688 aa19.15■□□□□ 0.66
PHGDH-234ENST00000642041 ANKRD20A12PQ8NF67 263 aa19.15■□□□□ 0.66
PHGDH-234ENST00000642041 GRIN2DO15399 1336 aa19.15■□□□□ 0.66
PHGDH-234ENST00000642041 POTEB3A0JP26 581 aa19.14■□□□□ 0.65
PHGDH-234ENST00000642041 NRDCO43847 1150 aa19.14■□□□□ 0.65
PHGDH-234ENST00000642041 TDP2O95551 362 aa19.14■□□□□ 0.65
PHGDH-234ENST00000642041 ALAS1P13196 640 aa19.14■□□□□ 0.65
PHGDH-234ENST00000642041 PLCB2Q00722 1185 aa19.14■□□□□ 0.65
PHGDH-234ENST00000642041 BEX3Q00994 111 aa19.14■□□□□ 0.65
PHGDH-234ENST00000642041 FOXK2Q01167 660 aa19.14■□□□□ 0.65
PHGDH-234ENST00000642041 SPAG1Q07617 926 aa19.14■□□□□ 0.65
PHGDH-234ENST00000642041 DPCR1Q3MIW9 517 aa19.14■□□□□ 0.65
PHGDH-234ENST00000642041 FOXR2Q6PJQ5 311 aa19.14■□□□□ 0.65
PHGDH-234ENST00000642041 POTEBQ6S5H4 581 aa19.14■□□□□ 0.65
PHGDH-234ENST00000642041 CHST13Q8NET6 341 aa19.14■□□□□ 0.65
PHGDH-234ENST00000642041 RIT2Q99578 217 aa19.14■□□□□ 0.65
PHGDH-234ENST00000642041 IMPACTQ9P2X3 320 aa19.14■□□□□ 0.65
PHGDH-234ENST00000642041 MCM3APO60318 1980 aa19.13■□□□□ 0.65
PHGDH-234ENST00000642041 TRIOO75962 3097 aa19.13■□□□□ 0.65
PHGDH-234ENST00000642041 ADAMTS3O15072 1205 aa19.13■□□□□ 0.65
PHGDH-234ENST00000642041 RHOBTB3O94955 611 aa19.13■□□□□ 0.65
PHGDH-234ENST00000642041 RPN1P04843 607 aaKnown RBP19.13■□□□□ 0.65
PHGDH-234ENST00000642041 ACTN1P12814 892 aa19.13■□□□□ 0.65
PHGDH-234ENST00000642041 AFMP43652 599 aa19.13■□□□□ 0.65
PHGDH-234ENST00000642041 KARSQ15046 597 aaKnown RBP19.13■□□□□ 0.65
PHGDH-234ENST00000642041 CEP55Q53EZ4 464 aa19.13■□□□□ 0.65
PHGDH-234ENST00000642041 C11orf57Q6ZUT1 292 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-234ENST00000642041 DHX40Q8IX18 779 aaKnown RBP19.13■□□□□ 0.65
PHGDH-234ENST00000642041 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-234ENST00000642041 SNX29Q8TEQ0 813 aa19.13■□□□□ 0.65
PHGDH-234ENST00000642041 NOC3LQ8WTT2 800 aaKnown RBP19.13■□□□□ 0.65
PHGDH-234ENST00000642041 CDHR1Q96JP9 859 aa19.13■□□□□ 0.65
PHGDH-234ENST00000642041 MPHOSPH6Q99547 160 aaKnown RBP19.13■□□□□ 0.65
PHGDH-234ENST00000642041 RNF146Q9NTX7 359 aa19.13■□□□□ 0.65
PHGDH-234ENST00000642041 TCEAL9Q9UHQ7 104 aa19.13■□□□□ 0.65
PHGDH-234ENST00000642041 MYH7BA7E2Y1 1941 aa19.13■□□□□ 0.65
PHGDH-234ENST00000642041 BICDL2A1A5D9 508 aa19.12■□□□□ 0.65
PHGDH-234ENST00000642041 SLC37A4O43826 429 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms