RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 TRIM50Q86XT4 487 aa22.04■■□□□ 1.12
PHGDH-210ENST00000641115 CCDC65Q8IXS2 484 aa22.04■■□□□ 1.12
PHGDH-210ENST00000641115 LENG1Q96BZ8 264 aaPredicted RBP22.04■■□□□ 1.12
PHGDH-210ENST00000641115 DNAJC19Q96DA6 116 aa22.04■■□□□ 1.12
PHGDH-210ENST00000641115 NRBP2Q9NSY0 501 aa22.04■■□□□ 1.12
PHGDH-210ENST00000641115 ERAP1Q9NZ08 941 aa22.04■■□□□ 1.12
PHGDH-210ENST00000641115 PCNTO95613 3336 aa22.04■■□□□ 1.12
PHGDH-210ENST00000641115 MYH11P35749 1972 aa22.03■■□□□ 1.12
PHGDH-210ENST00000641115 DUSP11O75319 330 aaKnown RBP22.03■■□□□ 1.12
PHGDH-210ENST00000641115 TBCAO75347 108 aaKnown RBP22.03■■□□□ 1.12
PHGDH-210ENST00000641115 RHOBTB3O94955 611 aa22.03■■□□□ 1.12
PHGDH-210ENST00000641115 ATP4AP20648 1035 aa22.03■■□□□ 1.12
PHGDH-210ENST00000641115 CPT1AP50416 773 aa22.03■■□□□ 1.12
PHGDH-210ENST00000641115 GSE1Q14687 1217 aa22.03■■□□□ 1.12
PHGDH-210ENST00000641115 REEP2Q9BRK0 252 aa22.03■■□□□ 1.12
PHGDH-210ENST00000641115 GTPBP4Q9BZE4 634 aaKnown RBP22.03■■□□□ 1.12
PHGDH-210ENST00000641115 ZNF215Q9UL58 517 aaPredicted RBP22.03■■□□□ 1.12
PHGDH-210ENST00000641115 NPHP3-ACAD11A0A0J9YXS1 232 aa22.02■■□□□ 1.12
PHGDH-210ENST00000641115 A6NJR5 290 aa22.02■■□□□ 1.12
PHGDH-210ENST00000641115 USO1O60763 962 aaKnown RBP22.02■■□□□ 1.12
PHGDH-210ENST00000641115 CAVIN2O95810 425 aa22.02■■□□□ 1.12
PHGDH-210ENST00000641115 HOXD8P13378 290 aaPredicted RBP22.02■■□□□ 1.12
PHGDH-210ENST00000641115 GUCY2CP25092 1073 aa22.02■■□□□ 1.12
PHGDH-210ENST00000641115 MARK3P27448 753 aa22.02■■□□□ 1.12
PHGDH-210ENST00000641115 NPEPPSP55786 919 aa22.02■■□□□ 1.12
PHGDH-210ENST00000641115 GIT2Q14161 759 aa22.02■■□□□ 1.12
PHGDH-210ENST00000641115 BBXQ8WY36 941 aaPredicted RBP22.02■■□□□ 1.12
PHGDH-210ENST00000641115 SH2D3AQ9BRG2 576 aa22.02■■□□□ 1.12
PHGDH-210ENST00000641115 NAT10Q9H0A0 1025 aaKnown RBP22.02■■□□□ 1.12
PHGDH-210ENST00000641115 DNAJC25Q9H1X3 360 aa22.02■■□□□ 1.12
PHGDH-210ENST00000641115 CYP26B1Q9NR63 512 aa22.02■■□□□ 1.12
PHGDH-210ENST00000641115 PANK4Q9NVE7 773 aa22.02■■□□□ 1.12
PHGDH-210ENST00000641115 DACH1Q9UI36 760 aa22.02■■□□□ 1.12
PHGDH-210ENST00000641115 RARBP10826 455 aa22.02■■□□□ 1.11
PHGDH-210ENST00000641115 CACNB1Q02641 598 aaPredicted RBP22.02■■□□□ 1.11
PHGDH-210ENST00000641115 MTERF2Q49AM1 385 aa22.02■■□□□ 1.11
PHGDH-210ENST00000641115 ZNF658Q5TYW1 1059 aaPredicted RBP22.02■■□□□ 1.11
PHGDH-210ENST00000641115 GAS2L3Q86XJ1 694 aa22.02■■□□□ 1.11
PHGDH-210ENST00000641115 MLKLQ8NB16 471 aa22.02■■□□□ 1.11
PHGDH-210ENST00000641115 ATP8B4Q8TF62 1192 aa22.02■■□□□ 1.11
PHGDH-210ENST00000641115 TIPINQ9BVW5 301 aa22.02■■□□□ 1.11
PHGDH-210ENST00000641115 NIFKQ9BYG3 293 aaKnown RBP22.02■■□□□ 1.11
PHGDH-210ENST00000641115 ZHX3Q9H4I2 956 aa22.02■■□□□ 1.11
PHGDH-210ENST00000641115 ODF2LQ9ULJ1 636 aa22.02■■□□□ 1.11
PHGDH-210ENST00000641115 ZNF286BP0CG31 522 aa22.01■■□□□ 1.11
PHGDH-210ENST00000641115 BMP6P22004 513 aa22.01■■□□□ 1.11
PHGDH-210ENST00000641115 GRK4P32298 578 aa22.01■■□□□ 1.11
PHGDH-210ENST00000641115 COASYQ13057 564 aa22.01■■□□□ 1.11
PHGDH-210ENST00000641115 MAP3K21Q5TCX8 1036 aa22.01■■□□□ 1.11
PHGDH-210ENST00000641115 SPC25Q9HBM1 224 aa22.01■■□□□ 1.11
PHGDH-210ENST00000641115 PTCH2Q9Y6C5 1203 aa22.01■■□□□ 1.11
PHGDH-210ENST00000641115 FRMD3A2A2Y4 597 aa22■■□□□ 1.11
PHGDH-210ENST00000641115 DGAT1O75907 488 aa22■■□□□ 1.11
PHGDH-210ENST00000641115 CCND3P30281 292 aaPredicted RBP22■■□□□ 1.11
PHGDH-210ENST00000641115 PLCB4Q15147 1175 aa22■■□□□ 1.11
PHGDH-210ENST00000641115 C11orf57Q6ZUT1 292 aaPredicted RBP22■■□□□ 1.11
PHGDH-210ENST00000641115 C16orf70Q9BSU1 422 aa22■■□□□ 1.11
PHGDH-210ENST00000641115 TRPC6Q9Y210 931 aa22■■□□□ 1.11
PHGDH-210ENST00000641115 PPME1Q9Y570 386 aa22■■□□□ 1.11
PHGDH-210ENST00000641115 COL4A3BPQ9Y5P4 624 aa22■■□□□ 1.11
PHGDH-210ENST00000641115 FAM13AO94988 1023 aa21.99■■□□□ 1.11
PHGDH-210ENST00000641115 INHAP05111 366 aa21.99■■□□□ 1.11
PHGDH-210ENST00000641115 ZNF165P49910 485 aa21.99■■□□□ 1.11
PHGDH-210ENST00000641115 PSMD2Q13200 908 aa21.99■■□□□ 1.11
PHGDH-210ENST00000641115 FSCN1Q16658 493 aaKnown RBP21.99■■□□□ 1.11
PHGDH-210ENST00000641115 HERC4Q5GLZ8 1057 aaPredicted RBP21.99■■□□□ 1.11
PHGDH-210ENST00000641115 SYNRGQ9UMZ2 1314 aa21.99■■□□□ 1.11
PHGDH-210ENST00000641115 H3BRB1 525 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 HBP1O60381 514 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 HIP1RO75146 1068 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 C6orf222P0C671 652 aaPredicted RBP21.98■■□□□ 1.11
PHGDH-210ENST00000641115 GAP43P17677 238 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 POLGP54098 1239 aaPredicted RBP21.98■■□□□ 1.11
PHGDH-210ENST00000641115 MCPH1Q8NEM0 835 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 FAM200AQ8TCP9 573 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 DRC1Q96MC2 740 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 TUT1Q9H6E5 874 aaKnown RBP21.98■■□□□ 1.11
PHGDH-210ENST00000641115 ATP6V0A4Q9HBG4 840 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 GDAQ9Y2T3 454 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 GOLGA6L3A6NEY3 463 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 RSPH10B2B2RC85 870 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 RSPH10BP0C881 870 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 RFC5P40937 340 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 GJA9P57773 515 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 EHHADHQ08426 723 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 FAM26FQ5R3K3 315 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 SMYD4Q8IYR2 804 aaPredicted RBP21.98■■□□□ 1.11
PHGDH-210ENST00000641115 SLC7A3Q8WY07 619 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 PARVGQ9HBI0 331 aa21.98■■□□□ 1.11
PHGDH-210ENST00000641115 STIM1Q13586 685 aa21.97■■□□□ 1.11
PHGDH-210ENST00000641115 TARBP2Q15633 366 aaKnown RBP21.97■■□□□ 1.11
PHGDH-210ENST00000641115 MAEAQ7L5Y9 396 aa21.97■■□□□ 1.11
PHGDH-210ENST00000641115 UPF3AQ9H1J1 476 aaKnown RBP21.97■■□□□ 1.11
PHGDH-210ENST00000641115 SLC39A2Q9NP94 309 aa21.97■■□□□ 1.11
PHGDH-210ENST00000641115 XPNPEP3Q9NQH7 507 aa21.97■■□□□ 1.11
PHGDH-210ENST00000641115 SEL1LQ9UBV2 794 aa21.97■■□□□ 1.11
PHGDH-210ENST00000641115 PTPN22Q9Y2R2 807 aa21.97■■□□□ 1.11
PHGDH-210ENST00000641115 PPP1R2P41236 205 aa21.96■■□□□ 1.11
PHGDH-210ENST00000641115 ZNF131P52739 623 aa21.96■■□□□ 1.11
PHGDH-210ENST00000641115 BEX3Q00994 111 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms