RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 ALG1Q9BT22 464 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 MMTAG2Q9BU76 263 aaKnown RBP6.42□□□□□ -1.38
FMR1-217ENST00000620828 NFKBIZQ9BYH8 718 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 PPP1R12CQ9BZL4 782 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 TCHHQ07283 1943 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 BTBD18B2RXH4 712 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 MUTP22033 750 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 ERVK-21P61565 698 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 STK3Q13188 491 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 AMHR2Q16671 573 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 INF2Q27J81 1249 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 TSHZ1Q6ZSZ6 1077 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 IFT122Q9HBG6 1241 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 ZNF302Q9NR11 478 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 RGS18Q9NS28 235 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 ORC3Q9UBD5 711 aaPredicted RBP6.42□□□□□ -1.38
FMR1-217ENST00000620828 ZNF215Q9UL58 517 aaPredicted RBP6.42□□□□□ -1.38
FMR1-217ENST00000620828 ISY1Q9ULR0 285 aaKnown RBP6.42□□□□□ -1.38
FMR1-217ENST00000620828 LCHNA4D1U4 455 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 PPFIA3O75145 1194 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 GJB5O95377 273 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 OATP04181 439 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 DNAJB2P25686 324 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 KRT2P35908 639 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 POU5F1BQ06416 359 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 Q7L0L9 218 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 ZNF710Q8N1W2 664 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 WASF1Q92558 559 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 CDX2Q99626 313 aaPredicted RBP6.42□□□□□ -1.38
FMR1-217ENST00000620828 SDF4Q9BRK5 362 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 WDR64B1ANS9 1081 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 ATF7P17544 494 aaPredicted RBP6.42□□□□□ -1.38
FMR1-217ENST00000620828 TRAPPC10P48553 1259 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 KCNC3Q14003 757 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 GRIN2CQ14957 1233 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 PRR16Q569H4 304 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 TRIM22Q8IYM9 498 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 ATP6V0A1Q93050 837 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 NAP1L4Q99733 375 aaKnown RBP6.42□□□□□ -1.38
FMR1-217ENST00000620828 XPNPEP1Q9NQW7 623 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 WDR70Q9NW82 654 aa6.42□□□□□ -1.38
FMR1-217ENST00000620828 DDX25Q9UHL0 483 aaKnown RBP6.42□□□□□ -1.38
FMR1-217ENST00000620828 VCANP13611 3396 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 POTEB3A0JP26 581 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 ENPP3O14638 875 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 EFCAB14O75071 495 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 DGKIO75912 1065 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 MYOGP15173 224 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 PPFIA1Q13136 1202 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 MIS18BP1Q6P0N0 1132 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 POTEBQ6S5H4 581 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 USP38Q8NB14 1042 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 TRAPPC12Q8WVT3 735 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 RNPC3Q96LT9 517 aaKnown RBP6.41□□□□□ -1.38
FMR1-217ENST00000620828 CCDC113Q9H0I3 377 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 PRDM5Q9NQX1 630 aaPredicted RBP6.41□□□□□ -1.38
FMR1-217ENST00000620828 DISC1Q9NRI5 854 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 TUBE1Q9UJT0 475 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 C2orf16Q68DN1 1984 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 RSPH10B2B2RC85 870 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 SORBS3O60504 671 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 PSAPP07602 524 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 RSPH10BP0C881 870 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 ARL2P36404 184 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 PRPHP41219 470 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 NLRP5P59047 1200 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 PLCB2Q00722 1185 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 DRP2Q13474 957 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 CAMK1Q14012 370 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 EPHA7Q15375 998 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 CDCA2Q69YH5 1023 aaPredicted RBP6.41□□□□□ -1.38
FMR1-217ENST00000620828 POLR3CQ9BUI4 534 aaPredicted RBP6.41□□□□□ -1.38
FMR1-217ENST00000620828 LMCD1Q9NZU5 365 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 CEP290O15078 2479 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 FSCN2O14926 492 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 GPC3P51654 580 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 SWSAP1Q6NVH7 229 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 FAM228AQ86W67 206 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 DIS3L2Q8IYB7 885 aaKnown RBP6.41□□□□□ -1.38
FMR1-217ENST00000620828 LBHD1Q9BQE6 289 aaPredicted RBP6.41□□□□□ -1.38
FMR1-217ENST00000620828 CELF4Q9BZC1 486 aaKnown RBP6.41□□□□□ -1.38
FMR1-217ENST00000620828 ELAC1Q9H777 363 aaKnown RBP6.41□□□□□ -1.38
FMR1-217ENST00000620828 DBR1Q9UK59 544 aaKnown RBP6.41□□□□□ -1.38
FMR1-217ENST00000620828 KMT2EQ8IZD2 1858 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 TRIP11Q15643 1979 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 C9IYK1 514 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 XRCC6P12956 609 aaKnown RBP eCLIP6.41□□□□□ -1.38
FMR1-217ENST00000620828 PTPAQ15257 358 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 INTS4Q96HW7 963 aaKnown RBP6.41□□□□□ -1.38
FMR1-217ENST00000620828 TRPV2Q9Y5S1 764 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 CDY2AQ9Y6F7 541 aa6.41□□□□□ -1.38
FMR1-217ENST00000620828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.4□□□□□ -1.38
FMR1-217ENST00000620828 LINC01553A4QN01 128 aa6.4□□□□□ -1.38
FMR1-217ENST00000620828 GNAT1P11488 350 aa6.4□□□□□ -1.38
FMR1-217ENST00000620828 CRYBB1P53674 252 aaPredicted RBP6.4□□□□□ -1.38
FMR1-217ENST00000620828 PRKCEQ02156 737 aa6.4□□□□□ -1.38
FMR1-217ENST00000620828 NOSTRINQ8IVI9 506 aa6.4□□□□□ -1.38
FMR1-217ENST00000620828 RNF168Q8IYW5 571 aaPredicted RBP6.4□□□□□ -1.38
FMR1-217ENST00000620828 TEKT3Q9BXF9 490 aa6.4□□□□□ -1.38
FMR1-217ENST00000620828 SLC26A4O43511 780 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms