RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 CABP7Q86V35 215 aa6.5□□□□□ -1.37
LINC00397-202ENST00000606785 DCP2Q8IU60 420 aaKnown RBP6.5□□□□□ -1.37
LINC00397-202ENST00000606785 PHYKPLQ8IUZ5 450 aa6.5□□□□□ -1.37
LINC00397-202ENST00000606785 TRIM48Q8IWZ4 208 aa6.5□□□□□ -1.37
LINC00397-202ENST00000606785 C7orf31Q8N865 590 aa6.5□□□□□ -1.37
LINC00397-202ENST00000606785 SEC14L1Q92503 715 aa6.5□□□□□ -1.37
LINC00397-202ENST00000606785 IL17RAQ96F46 866 aa6.5□□□□□ -1.37
LINC00397-202ENST00000606785 QRSL1Q9H0R6 528 aaKnown RBP6.5□□□□□ -1.37
LINC00397-202ENST00000606785 ADAMTS10Q9H324 1103 aa6.5□□□□□ -1.37
LINC00397-202ENST00000606785 SEMA4AQ9H3S1 761 aa6.5□□□□□ -1.37
LINC00397-202ENST00000606785 DDX21Q9NR30 783 aaKnown RBP eCLIP6.5□□□□□ -1.37
LINC00397-202ENST00000606785 SLAMF8Q9P0V8 285 aa6.5□□□□□ -1.37
LINC00397-202ENST00000606785 ASH2LQ9UBL3 628 aa6.5□□□□□ -1.37
LINC00397-202ENST00000606785 PRAMEF25A6NGN4 478 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 IFRD1O00458 451 aaPredicted RBP6.49□□□□□ -1.37
LINC00397-202ENST00000606785 NRDCO43847 1150 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 CTNND1O60716 968 aaKnown RBP6.49□□□□□ -1.37
LINC00397-202ENST00000606785 OSMP13725 252 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 MTHFD2P13995 350 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 MRPS9P82933 396 aaKnown RBP6.49□□□□□ -1.37
LINC00397-202ENST00000606785 CHRNEQ04844 493 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 MORC3Q14149 939 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 ZNF267Q14586 743 aaPredicted RBP6.49□□□□□ -1.37
LINC00397-202ENST00000606785 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.49□□□□□ -1.37
LINC00397-202ENST00000606785 CT83Q5H943 113 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 RALGPS1Q5JS13 557 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 ATAT1Q5SQI0 421 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 CHST15Q7LFX5 561 aaPredicted RBP6.49□□□□□ -1.37
LINC00397-202ENST00000606785 NUP43Q8NFH3 380 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 EAF2Q96CJ1 260 aaPredicted RBP6.49□□□□□ -1.37
LINC00397-202ENST00000606785 ALPK1Q96QP1 1244 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 ARPC5LQ9BPX5 153 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 ANO3Q9BYT9 981 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 RNF38Q9H0F5 515 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 WNT8AQ9H1J5 351 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 TMEM59LQ9UK28 342 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 PTPN22Q9Y2R2 807 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 PCDHB4Q9Y5E5 795 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 PPP2R3BQ9Y5P8 575 aa6.49□□□□□ -1.37
LINC00397-202ENST00000606785 A0A1W2PQJ5 194 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 APAF1O14727 1248 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 NDUFS2O75306 463 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 POU2F2P09086 479 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 CLEC2LP0C7M8 214 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 GLI4P10075 376 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 PRKCAP17252 672 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 SPINK2P20155 84 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 HERVK_113P62684 666 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 CCDC62Q6P9F0 684 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 LILRA6Q6PI73 481 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 SPPL2CQ8IUH8 684 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 STK11IPQ8N1F8 1099 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 NETO2Q8NC67 525 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 CLEC4DQ8WXI8 215 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 ASB15Q8WXK1 588 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 HPS3Q969F9 1004 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 RAX2Q96IS3 184 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 MAML3Q96JK9 1138 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 STRBPQ96SI9 672 aaKnown RBP6.48□□□□□ -1.37
LINC00397-202ENST00000606785 PLCD4Q9BRC7 762 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 GTPBP4Q9BZE4 634 aaKnown RBP6.48□□□□□ -1.37
LINC00397-202ENST00000606785 AP5M1Q9H0R1 490 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 EDARQ9UNE0 448 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 FAM50BQ9Y247 325 aa6.48□□□□□ -1.37
LINC00397-202ENST00000606785 TCRBV5S2A0A599 114 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 UBA6A0AVT1 1052 aaPredicted RBP6.47□□□□□ -1.37
LINC00397-202ENST00000606785 NOTOA8MTQ0 251 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 ELL2O00472 640 aaPredicted RBP6.47□□□□□ -1.37
LINC00397-202ENST00000606785 EIF5BO60841 1220 aaKnown RBP6.47□□□□□ -1.37
LINC00397-202ENST00000606785 TGFB1P01137 390 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 MMEP08473 750 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 HOXA10P31260 410 aaPredicted RBP6.47□□□□□ -1.37
LINC00397-202ENST00000606785 CD96P40200 585 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 HTR3AP46098 478 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 SLC5A3P53794 718 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 USP14P54578 494 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 DHX8Q14562 1220 aaKnown RBP6.47□□□□□ -1.37
LINC00397-202ENST00000606785 KIR3DS1Q14943 382 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 PITRM1Q5JRX3 1037 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 C10orf62Q5T681 223 aaPredicted RBP6.47□□□□□ -1.37
LINC00397-202ENST00000606785 BICRALQ6AI39 1079 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 TIGD7Q6NT04 549 aaPredicted RBP6.47□□□□□ -1.37
LINC00397-202ENST00000606785 INTS5Q6P9B9 1019 aaKnown RBP6.47□□□□□ -1.37
LINC00397-202ENST00000606785 SRGAP1Q7Z6B7 1085 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 CATIPQ7Z7H3 387 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 C11orf96Q7Z7L8 435 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 RTN4RL1Q86UN2 441 aaPredicted RBP6.47□□□□□ -1.37
LINC00397-202ENST00000606785 SIRT2Q8IXJ6 389 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 SPICE1Q8N0Z3 855 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 FAM43AQ8N2R8 423 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 PDZD8Q8NEN9 1154 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 TTLL11Q8NHH1 800 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 DIS3LQ8TF46 1054 aaKnown RBP6.47□□□□□ -1.37
LINC00397-202ENST00000606785 E2F7Q96AV8 911 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 FOXRED1Q96CU9 486 aaPredicted RBP6.47□□□□□ -1.37
LINC00397-202ENST00000606785 GBP4Q96PP9 640 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 FAM193BQ96PV7 902 aaPredicted RBP6.47□□□□□ -1.37
LINC00397-202ENST00000606785 SLC2A13Q96QE2 648 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 POFUT1Q9H488 388 aa6.47□□□□□ -1.37
LINC00397-202ENST00000606785 TUBD1Q9UJT1 453 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms