RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 TCF20Q9UGU0 1960 aaKnown RBP21.12■□□□□ 0.97
CCDC9-205ENST00000600117 MROH7Q68CQ1 1323 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 GRXCR1A8MXD5 290 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 SLITRK3O94933 977 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 STBD1O95210 358 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 P4HBP07237 508 aaKnown RBP21.12■□□□□ 0.97
CCDC9-205ENST00000600117 MARK3P27448 753 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 CDC25AP30304 524 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 SLC26A2P50443 739 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 CYP4A11Q02928 519 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 ADGRE1Q14246 886 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 PLCB4Q15147 1175 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 KIAA0753Q2KHM9 967 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 NBPF20Q3BBV1 942 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 NEK9Q8TD19 979 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 PPP1R13LQ8WUF5 828 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 AK8Q96MA6 479 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 POLR3CQ9BUI4 534 aaPredicted RBP21.12■□□□□ 0.97
CCDC9-205ENST00000600117 CSRNP2Q9H175 543 aa21.12■□□□□ 0.97
CCDC9-205ENST00000600117 MED24O75448 989 aa21.11■□□□□ 0.97
CCDC9-205ENST00000600117 QARSP47897 775 aaKnown RBP21.11■□□□□ 0.97
CCDC9-205ENST00000600117 PSMC5P62195 406 aa21.11■□□□□ 0.97
CCDC9-205ENST00000600117 ITGA7Q13683 1181 aa21.11■□□□□ 0.97
CCDC9-205ENST00000600117 CTTNQ14247 550 aaKnown RBP21.11■□□□□ 0.97
CCDC9-205ENST00000600117 AXDND1Q5T1B0 1012 aaPredicted RBP21.11■□□□□ 0.97
CCDC9-205ENST00000600117 CATSPER3Q86XQ3 398 aa21.11■□□□□ 0.97
CCDC9-205ENST00000600117 ATP6V0A1Q93050 837 aa21.11■□□□□ 0.97
CCDC9-205ENST00000600117 SPATA32Q96LK8 384 aa21.11■□□□□ 0.97
CCDC9-205ENST00000600117 LXNQ9BS40 222 aa21.11■□□□□ 0.97
CCDC9-205ENST00000600117 SCAND2PQ9GZW5 306 aaPredicted RBP21.11■□□□□ 0.97
CCDC9-205ENST00000600117 TUFT1Q9NNX1 390 aa21.11■□□□□ 0.97
CCDC9-205ENST00000600117 GBF1Q92538 1859 aa21.1■□□□□ 0.97
CCDC9-205ENST00000600117 A0A0U1RQG5 324 aaPredicted RBP21.1■□□□□ 0.97
CCDC9-205ENST00000600117 CUTAO60888 179 aa21.1■□□□□ 0.97
CCDC9-205ENST00000600117 LYPLA2O95372 231 aa21.1■□□□□ 0.97
CCDC9-205ENST00000600117 RPA1P27694 616 aa21.1■□□□□ 0.97
CCDC9-205ENST00000600117 PRKCEQ02156 737 aa21.1■□□□□ 0.97
CCDC9-205ENST00000600117 CCDC85BQ15834 202 aaPredicted RBP21.1■□□□□ 0.97
CCDC9-205ENST00000600117 ECM1Q16610 540 aa21.1■□□□□ 0.97
CCDC9-205ENST00000600117 PSRC1Q6PGN9 363 aaPredicted RBP21.1■□□□□ 0.97
CCDC9-205ENST00000600117 USP49Q70CQ1 688 aa21.1■□□□□ 0.97
CCDC9-205ENST00000600117 ERMNQ8TAM6 284 aa21.1■□□□□ 0.97
CCDC9-205ENST00000600117 SNX29Q8TEQ0 813 aa21.1■□□□□ 0.97
CCDC9-205ENST00000600117 ATP8B4Q8TF62 1192 aa21.1■□□□□ 0.97
CCDC9-205ENST00000600117 VTI1AQ96AJ9 217 aa21.1■□□□□ 0.97
CCDC9-205ENST00000600117 GDPD2Q9HCC8 539 aa21.1■□□□□ 0.97
CCDC9-205ENST00000600117 PCDHA7Q9UN72 937 aa21.1■□□□□ 0.97
CCDC9-205ENST00000600117 STK24Q9Y6E0 443 aa21.1■□□□□ 0.97
CCDC9-205ENST00000600117 HOXC8P31273 242 aa21.09■□□□□ 0.97
CCDC9-205ENST00000600117 HOXD11P31277 338 aaPredicted RBP21.09■□□□□ 0.97
CCDC9-205ENST00000600117 CCT6AP40227 531 aaKnown RBP21.09■□□□□ 0.97
CCDC9-205ENST00000600117 CDK7P50613 346 aa21.09■□□□□ 0.97
CCDC9-205ENST00000600117 RAB30Q15771 203 aa21.09■□□□□ 0.97
CCDC9-205ENST00000600117 SPECC1Q5M775 1068 aa21.09■□□□□ 0.97
CCDC9-205ENST00000600117 HAUS3Q68CZ6 603 aa21.09■□□□□ 0.97
CCDC9-205ENST00000600117 NFRKBQ6P4R8 1299 aa21.09■□□□□ 0.97
CCDC9-205ENST00000600117 SESTD1Q86VW0 696 aa21.09■□□□□ 0.97
CCDC9-205ENST00000600117 TPH2Q8IWU9 490 aa21.09■□□□□ 0.97
CCDC9-205ENST00000600117 C4orf19Q8IY42 314 aa21.09■□□□□ 0.97
CCDC9-205ENST00000600117 TMEM199Q8N511 208 aa21.09■□□□□ 0.97
CCDC9-205ENST00000600117 ZNF579Q8NAF0 562 aaKnown RBP21.09■□□□□ 0.97
CCDC9-205ENST00000600117 C1QTNF1Q9BXJ1 281 aa21.09■□□□□ 0.97
CCDC9-205ENST00000600117 ZSWIM4Q9H7M6 989 aa21.09■□□□□ 0.97
CCDC9-205ENST00000600117 HDAC6Q9UBN7 1215 aa21.09■□□□□ 0.97
CCDC9-205ENST00000600117 MSRAQ9UJ68 235 aa21.09■□□□□ 0.97
CCDC9-205ENST00000600117 POTEB3A0JP26 581 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 ARVCFO00192 962 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 OATP04181 439 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 SMIM10L2AP0DMW4 78 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 SMIM10L2BP0DMW5 78 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 CSF2RAP15509 400 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 IGFBP4P22692 258 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 ME1P48163 572 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 CHMP4BP1P59074 171 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 HIC1Q14526 733 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 XKR3Q5GH77 459 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 HYIQ5T013 277 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 KRT79Q5XKE5 535 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 POTEBQ6S5H4 581 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 ZNF365Q70YC5 407 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 FAM167AQ96KS9 214 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 PNMA5Q96PV4 448 aa21.08■□□□□ 0.97
CCDC9-205ENST00000600117 TSPYL2Q9H2G4 693 aaPredicted RBP21.08■□□□□ 0.97
CCDC9-205ENST00000600117 ZBTB42B2RXF5 422 aa21.07■□□□□ 0.96
CCDC9-205ENST00000600117 HBP1O60381 514 aa21.07■□□□□ 0.96
CCDC9-205ENST00000600117 DKC1O60832 514 aaKnown RBP eCLIP21.07■□□□□ 0.96
CCDC9-205ENST00000600117 MUTP22033 750 aa21.07■□□□□ 0.96
CCDC9-205ENST00000600117 PTPN11Q06124 597 aaPredicted RBP21.07■□□□□ 0.96
CCDC9-205ENST00000600117 GRB10Q13322 594 aa21.07■□□□□ 0.96
CCDC9-205ENST00000600117 POTEGQ6S5H5 508 aa21.07■□□□□ 0.96
CCDC9-205ENST00000600117 SHC4Q6S5L8 630 aa21.07■□□□□ 0.96
CCDC9-205ENST00000600117 ANO5Q75V66 913 aa21.07■□□□□ 0.96
CCDC9-205ENST00000600117 CABP7Q86V35 215 aa21.07■□□□□ 0.96
CCDC9-205ENST00000600117 CKAP2LQ8IYA6 745 aa21.07■□□□□ 0.96
CCDC9-205ENST00000600117 BBXQ8WY36 941 aaPredicted RBP21.07■□□□□ 0.96
CCDC9-205ENST00000600117 EPSTI1Q96J88 318 aa21.07■□□□□ 0.96
CCDC9-205ENST00000600117 CCSER1Q9C0I3 900 aa21.07■□□□□ 0.96
CCDC9-205ENST00000600117 CXXC1Q9P0U4 656 aaPredicted RBP21.07■□□□□ 0.96
CCDC9-205ENST00000600117 GTF2IRD1Q9UHL9 959 aa21.07■□□□□ 0.96
CCDC9-205ENST00000600117 TRPC6Q9Y210 931 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms