RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 RPLP2P05387 115 aaKnown RBP22.01■■□□□ 1.11
SHKBP1-214ENST00000597396 RFC2P35250 354 aa22.01■■□□□ 1.11
SHKBP1-214ENST00000597396 LRIT3Q3SXY7 679 aa22.01■■□□□ 1.11
SHKBP1-214ENST00000597396 ARL6IP4Q66PJ3 421 aaKnown RBP22.01■■□□□ 1.11
SHKBP1-214ENST00000597396 HAUS3Q68CZ6 603 aa22.01■■□□□ 1.11
SHKBP1-214ENST00000597396 RPUSD2Q8IZ73 545 aaKnown RBP22.01■■□□□ 1.11
SHKBP1-214ENST00000597396 HSD17B14Q9BPX1 270 aa22.01■■□□□ 1.11
SHKBP1-214ENST00000597396 NIFKQ9BYG3 293 aaKnown RBP22.01■■□□□ 1.11
SHKBP1-214ENST00000597396 TUFT1Q9NNX1 390 aa22.01■■□□□ 1.11
SHKBP1-214ENST00000597396 IL23AQ9NPF7 189 aa22.01■■□□□ 1.11
SHKBP1-214ENST00000597396 WRAP73Q9P2S5 460 aaPredicted RBP22.01■■□□□ 1.11
SHKBP1-214ENST00000597396 SMIM35A0A1B0GVV1 85 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 RSPH10B2B2RC85 870 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 STBD1O95210 358 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 PARNO95453 639 aaKnown RBP22■■□□□ 1.11
SHKBP1-214ENST00000597396 C22orf31O95567 290 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 F13A1P00488 732 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 RSPH10BP0C881 870 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 ACRP10323 421 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 YWHABP31946 246 aaKnown RBP22■■□□□ 1.11
SHKBP1-214ENST00000597396 TBC1D8BQ0IIM8 1120 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 PDIA5Q14554 519 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 PLA2G4FQ68DD2 849 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 ANO5Q75V66 913 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 OTUD6AQ7L8S5 288 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 DEFB128Q7Z7B8 93 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 METTL13Q8N6R0 699 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 CCDC43Q96MW1 224 aaKnown RBP22■■□□□ 1.11
SHKBP1-214ENST00000597396 CLIC4Q9Y696 253 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 STK24Q9Y6E0 443 aa22■■□□□ 1.11
SHKBP1-214ENST00000597396 VWA3AA6NCI4 1184 aa21.99■■□□□ 1.11
SHKBP1-214ENST00000597396 CCT6AP40227 531 aaKnown RBP21.99■■□□□ 1.11
SHKBP1-214ENST00000597396 EPHB4P54760 987 aa21.99■■□□□ 1.11
SHKBP1-214ENST00000597396 CEBPZQ03701 1054 aaKnown RBP21.99■■□□□ 1.11
SHKBP1-214ENST00000597396 PKP1Q13835 747 aa21.99■■□□□ 1.11
SHKBP1-214ENST00000597396 TARBP2Q15633 366 aaKnown RBP21.99■■□□□ 1.11
SHKBP1-214ENST00000597396 IL17AQ16552 155 aa21.99■■□□□ 1.11
SHKBP1-214ENST00000597396 RPAINQ86UA6 219 aa21.99■■□□□ 1.11
SHKBP1-214ENST00000597396 IGSF22Q8N9C0 903 aa21.99■■□□□ 1.11
SHKBP1-214ENST00000597396 ZNF396Q96N95 335 aaPredicted RBP21.99■■□□□ 1.11
SHKBP1-214ENST00000597396 SH2D3AQ9BRG2 576 aa21.99■■□□□ 1.11
SHKBP1-214ENST00000597396 POLR3CQ9BUI4 534 aaPredicted RBP21.99■■□□□ 1.11
SHKBP1-214ENST00000597396 FTOQ9C0B1 505 aaKnown RBP eCLIP21.99■■□□□ 1.11
SHKBP1-214ENST00000597396 M0QZ92 97 aa21.98■■□□□ 1.11
SHKBP1-214ENST00000597396 MED24O75448 989 aa21.98■■□□□ 1.11
SHKBP1-214ENST00000597396 LYPLA2O95372 231 aa21.98■■□□□ 1.11
SHKBP1-214ENST00000597396 PFKMP08237 780 aa21.98■■□□□ 1.11
SHKBP1-214ENST00000597396 TMOD1P28289 359 aa21.98■■□□□ 1.11
SHKBP1-214ENST00000597396 MRPS6P82932 125 aaKnown RBP21.98■■□□□ 1.11
SHKBP1-214ENST00000597396 XKR9Q5GH70 373 aa21.98■■□□□ 1.11
SHKBP1-214ENST00000597396 GPR153Q6NV75 609 aa21.98■■□□□ 1.11
SHKBP1-214ENST00000597396 EFCAB12Q6NXP0 572 aa21.98■■□□□ 1.11
SHKBP1-214ENST00000597396 PSRC1Q6PGN9 363 aaPredicted RBP21.98■■□□□ 1.11
SHKBP1-214ENST00000597396 CATSPER3Q86XQ3 398 aa21.98■■□□□ 1.11
SHKBP1-214ENST00000597396 SNX29Q8TEQ0 813 aa21.98■■□□□ 1.11
SHKBP1-214ENST00000597396 CEP170P1Q96L14 293 aa21.98■■□□□ 1.11
SHKBP1-214ENST00000597396 CYP26B1Q9NR63 512 aa21.98■■□□□ 1.11
SHKBP1-214ENST00000597396 SPATA31C1P0DKV0 1188 aa21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 RPA1P27694 616 aa21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 CLCN3P51790 818 aa21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 NPEPPSP55786 919 aa21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 FAM26DQ5JW98 314 aa21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 IER5Q5VY09 327 aa21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 KRT79Q5XKE5 535 aa21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 TRAF7Q6Q0C0 670 aa21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 NME8Q8N427 588 aa21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 DEFB123Q8N688 67 aa21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 USP28Q96RU2 1077 aa21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 MAP7D2Q96T17 732 aa21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 SUGCTQ9HAC7 445 aa21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 PPME1Q9Y570 386 aa21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 CDY2AQ9Y6F7 541 aa21.97■■□□□ 1.11
SHKBP1-214ENST00000597396 TCHHQ07283 1943 aa21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 ZBTB39O15060 712 aa21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 FGBP02675 491 aa21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 ANP32AP39687 249 aaKnown RBP21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 TMEM62Q0P6H9 643 aa21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 FOXD4L6Q3SYB3 417 aaPredicted RBP21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 TMEM240Q5SV17 173 aa21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 POTEGQ6S5H5 508 aa21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 FOXD4L3Q6VB84 417 aaPredicted RBP21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 ZNF365Q70YC5 407 aa21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 KIAA0319LQ8IZA0 1049 aa21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 LRRC71Q8N4P6 559 aa21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 JPH2Q9BR39 696 aaPredicted RBP21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 ANKEF1Q9NU02 776 aa21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 AKT3Q9Y243 479 aa21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 TRPV2Q9Y5S1 764 aa21.96■■□□□ 1.11
SHKBP1-214ENST00000597396 PP2D1A8MPX8 630 aa21.95■■□□□ 1.1
SHKBP1-214ENST00000597396 NBNO60934 754 aa21.95■■□□□ 1.1
SHKBP1-214ENST00000597396 CHRNA1P02708 482 aa21.95■■□□□ 1.1
SHKBP1-214ENST00000597396 MUTP22033 750 aa21.95■■□□□ 1.1
SHKBP1-214ENST00000597396 POLGP54098 1239 aaPredicted RBP21.95■■□□□ 1.1
SHKBP1-214ENST00000597396 MBTPS1Q14703 1052 aa21.95■■□□□ 1.1
SHKBP1-214ENST00000597396 PTPAQ15257 358 aa21.95■■□□□ 1.1
SHKBP1-214ENST00000597396 SHHQ15465 462 aa21.95■■□□□ 1.1
SHKBP1-214ENST00000597396 C9orf50Q5SZB4 431 aa21.95■■□□□ 1.1
SHKBP1-214ENST00000597396 Q7L0L9 218 aa21.95■■□□□ 1.1
SHKBP1-214ENST00000597396 C16orf59Q7L2K0 433 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms