RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 NEK9Q8TD19 979 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 LENG1Q96BZ8 264 aaPredicted RBP10.45□□□□□ -0.74
VPS25-205ENST00000590339 UIMC1Q96RL1 719 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 HSD17B14Q9BPX1 270 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 EIF2AK1Q9BQI3 630 aaKnown RBP10.45□□□□□ -0.74
VPS25-205ENST00000590339 PDCD2LQ9BRP1 358 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 TEKT3Q9BXF9 490 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 UNC45AQ9H3U1 944 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 ACAD9Q9H845 621 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 XPNPEP3Q9NQH7 507 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 KCND1Q9NSA2 647 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 PCDHA2Q9Y5H9 948 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 KCNJ18B7U540 433 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 GAS7O60861 476 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 OFD1O75665 1012 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 EYA4O95677 639 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 ZNF865P0CJ78 1059 aaPredicted RBP10.44□□□□□ -0.74
VPS25-205ENST00000590339 CDK11BP21127 795 aaKnown RBP10.44□□□□□ -0.74
VPS25-205ENST00000590339 COPB1P53618 953 aaKnown RBP10.44□□□□□ -0.74
VPS25-205ENST00000590339 KCNJ12Q14500 433 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 NOLC1Q14978 699 aaKnown RBP eCLIP10.44□□□□□ -0.74
VPS25-205ENST00000590339 LRRC41Q15345 812 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 EPHA7Q15375 998 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 TPD52L1Q16890 204 aaPredicted RBP10.44□□□□□ -0.74
VPS25-205ENST00000590339 ZCWPW2Q504Y3 356 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 ARSHQ5FYA8 562 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 TCP11X2Q5H9J9 407 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 FAM26FQ5R3K3 315 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 SPECC1LQ69YQ0 1117 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 RNF207Q6ZRF8 634 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 DYMQ7RTS9 669 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 CCDC65Q8IXS2 484 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 PURBQ96QR8 312 aaKnown RBP10.44□□□□□ -0.74
VPS25-205ENST00000590339 TAAR1Q96RJ0 339 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 ZNF577Q9BSK1 485 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 SEMA6BQ9H3T3 888 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 AGO4Q9HCK5 861 aaKnown RBP10.44□□□□□ -0.74
VPS25-205ENST00000590339 A1CFQ9NQ94 594 aaKnown RBP10.44□□□□□ -0.74
VPS25-205ENST00000590339 JADE2Q9NQC1 790 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 PXMP2Q9NR77 195 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.44□□□□□ -0.74
VPS25-205ENST00000590339 FAM184BQ9ULE4 1060 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 MAPK8IP1Q9UQF2 711 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 ATP11BQ9Y2G3 1177 aa10.44□□□□□ -0.74
VPS25-205ENST00000590339 SOWAHBA6NEL2 793 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 IPO5O00410 1097 aaKnown RBP10.43□□□□□ -0.74
VPS25-205ENST00000590339 DHX15O43143 795 aaKnown RBP10.43□□□□□ -0.74
VPS25-205ENST00000590339 TEX33O43247 280 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 AKR1A1P14550 325 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 SFPQP23246 707 aaKnown RBP eCLIP10.43□□□□□ -0.74
VPS25-205ENST00000590339 PSMC6P62333 389 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 IRX5P78411 483 aaPredicted RBP10.43□□□□□ -0.74
VPS25-205ENST00000590339 LRRC63Q05C16 580 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 ITGB3BPQ13352 177 aaPredicted RBP10.43□□□□□ -0.74
VPS25-205ENST00000590339 ACVR2BQ13705 512 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 SLC39A5Q6ZMH5 540 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.43□□□□□ -0.74
VPS25-205ENST00000590339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.43□□□□□ -0.74
VPS25-205ENST00000590339 ARMCX2Q7L311 632 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 EEPD1Q7L9B9 569 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 RNF180Q86T96 592 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 TMEM139Q8IV31 216 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 ZC3H3Q8IXZ2 948 aaKnown RBP10.43□□□□□ -0.74
VPS25-205ENST00000590339 C17orf53Q8N3J3 647 aaPredicted RBP10.43□□□□□ -0.74
VPS25-205ENST00000590339 CCDC112Q8NEF3 446 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 HPS3Q969F9 1004 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 DYDC2Q96IM9 177 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 TMX1Q9H3N1 280 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 SLC39A2Q9NP94 309 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 KCNH7Q9NS40 1196 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 PANK4Q9NVE7 773 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 DNM3Q9UQ16 869 aa10.43□□□□□ -0.74
VPS25-205ENST00000590339 LGALS16A8MUM7 142 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 SLITRK3O94933 977 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 LYPLA2O95372 231 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 SKILP12757 684 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 IDEP14735 1019 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 EIF2AK2P19525 551 aaKnown RBP10.42□□□□□ -0.74
VPS25-205ENST00000590339 FECHP22830 423 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 MAGEA10P43363 369 aaPredicted RBP10.42□□□□□ -0.74
VPS25-205ENST00000590339 FXR1P51114 621 aaKnown RBP eCLIP10.42□□□□□ -0.74
VPS25-205ENST00000590339 RTP1P59025 263 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 CYP4A11Q02928 519 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 BAATQ14032 418 aaPredicted RBP10.42□□□□□ -0.74
VPS25-205ENST00000590339 GIT2Q14161 759 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 FILIP1LQ4L180 1135 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 ANKRD40Q6AI12 368 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 MAMDC4Q6UXC1 1216 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 LRRC55Q6ZSA7 311 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 ZNF467Q7Z7K2 595 aaPredicted RBP10.42□□□□□ -0.74
VPS25-205ENST00000590339 FAM114A1Q8IWE2 563 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 MSL3Q8N5Y2 521 aaKnown RBP10.42□□□□□ -0.74
VPS25-205ENST00000590339 FAM133AQ8N9E0 248 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 TC2NQ8N9U0 490 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 GLIS3Q8NEA6 775 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 ANKRD20A12PQ8NF67 263 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 GPRASP2Q96D09 838 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 FGD4Q96M96 766 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 INPP4AQ96PE3 977 aaPredicted RBP10.42□□□□□ -0.74
VPS25-205ENST00000590339 RMDN3Q96TC7 470 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms