RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 FAM217BQ9NTX9 383 aaPredicted RBP15.57■□□□□ 0.08
HDAC5-208ENST00000588419 PLAGL2Q9UPG8 496 aa15.57■□□□□ 0.08
HDAC5-208ENST00000588419 SAMM50Q9Y512 469 aa15.57■□□□□ 0.08
HDAC5-208ENST00000588419 TBKBP1A7MCY6 615 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 IPO5O00410 1097 aaKnown RBP15.56■□□□□ 0.08
HDAC5-208ENST00000588419 ADAMTS3O15072 1205 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 NCK2O43639 380 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 MGEA5O60502 916 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 ATG7O95352 703 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 VTNP04004 478 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 ITGB1P05556 798 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 HMGB1P09429 215 aaKnown RBP15.56■□□□□ 0.08
HDAC5-208ENST00000588419 DNAJB1P25685 340 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 IRS1P35568 1242 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 LTBRP36941 435 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 SETQ01105 290 aaPredicted RBP15.56■□□□□ 0.08
HDAC5-208ENST00000588419 AKAP17AQ02040 695 aaKnown RBP15.56■□□□□ 0.08
HDAC5-208ENST00000588419 ZP2Q05996 745 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 KIZQ2M2Z5 673 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 ABHD15Q6UXT9 468 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 NIPA1Q7RTP0 329 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 ADGRD2Q7Z7M1 963 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 RBM23Q86U06 439 aaKnown RBP15.56■□□□□ 0.08
HDAC5-208ENST00000588419 NME8Q8N427 588 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 CCDC12Q8WUD4 166 aaPredicted RBP15.56■□□□□ 0.08
HDAC5-208ENST00000588419 POF1BQ8WVV4 589 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 TMEM40Q8WWA1 233 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 PHKBQ93100 1093 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 PPP2R3CQ969Q6 453 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 OSMRQ99650 979 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 CDHR5Q9HBB8 845 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 NOC2LQ9Y3T9 749 aaKnown RBP15.56■□□□□ 0.08
HDAC5-208ENST00000588419 PCDHB7Q9Y5E2 793 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 PCDHGC5Q9Y5F6 944 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 SQORQ9Y6N5 450 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 COL1A2P08123 1366 aa15.56■□□□□ 0.08
HDAC5-208ENST00000588419 KDM3AQ9Y4C1 1321 aa15.55■□□□□ 0.08
HDAC5-208ENST00000588419 IGKV6D-21A0A0A0MT36 114 aa15.55■□□□□ 0.08
HDAC5-208ENST00000588419 CCDC196A0A1B0GTZ2 297 aa15.55■□□□□ 0.08
HDAC5-208ENST00000588419 MBTPS2O43462 519 aa15.55■□□□□ 0.08
HDAC5-208ENST00000588419 ALADP13716 330 aa15.55■□□□□ 0.08
HDAC5-208ENST00000588419 SARSP49591 514 aaKnown RBP15.55■□□□□ 0.08
HDAC5-208ENST00000588419 PRR16Q569H4 304 aa15.55■□□□□ 0.08
HDAC5-208ENST00000588419 BLOC1S2Q6QNY1 142 aa15.55■□□□□ 0.08
HDAC5-208ENST00000588419 P2RX5Q93086 422 aa15.55■□□□□ 0.08
HDAC5-208ENST00000588419 ADAM2Q99965 735 aa15.55■□□□□ 0.08
HDAC5-208ENST00000588419 ERVK-5Q9HDB9 667 aa15.55■□□□□ 0.08
HDAC5-208ENST00000588419 HCSTQ9UBK5 93 aa15.55■□□□□ 0.08
HDAC5-208ENST00000588419 CD207Q9UJ71 328 aa15.55■□□□□ 0.08
HDAC5-208ENST00000588419 IGLV3-22A0A075B6J6 115 aa15.54■□□□□ 0.08
HDAC5-208ENST00000588419 DCXO43602 365 aa15.54■□□□□ 0.08
HDAC5-208ENST00000588419 CHMP2AO43633 222 aa15.54■□□□□ 0.08
HDAC5-208ENST00000588419 NRIP1P48552 1158 aa15.54■□□□□ 0.08
HDAC5-208ENST00000588419 CLCN3P51790 818 aa15.54■□□□□ 0.08
HDAC5-208ENST00000588419 SMAD4Q13485 552 aaKnown RBP15.54■□□□□ 0.08
HDAC5-208ENST00000588419 COL19A1Q14993 1142 aa15.54■□□□□ 0.08
HDAC5-208ENST00000588419 TSGA10IPQ3SY00 556 aa15.54■□□□□ 0.08
HDAC5-208ENST00000588419 ZNF484Q5JVG2 852 aa15.54■□□□□ 0.08
HDAC5-208ENST00000588419 ADHFE1Q8IWW8 467 aa15.54■□□□□ 0.08
HDAC5-208ENST00000588419 MICAL1Q8TDZ2 1067 aa15.54■□□□□ 0.08
HDAC5-208ENST00000588419 ZNF668Q96K58 619 aaPredicted RBP15.54■□□□□ 0.08
HDAC5-208ENST00000588419 SLC26A6Q9BXS9 759 aa15.54■□□□□ 0.08
HDAC5-208ENST00000588419 GABBR1Q9UBS5 961 aa15.54■□□□□ 0.08
HDAC5-208ENST00000588419 ST3GAL5Q9UNP4 418 aa15.54■□□□□ 0.08
HDAC5-208ENST00000588419 AKT3Q9Y243 479 aa15.54■□□□□ 0.08
HDAC5-208ENST00000588419 PRR33A8MZF0 331 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 GPR182O15218 404 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 DHX15O43143 795 aaKnown RBP15.53■□□□□ 0.08
HDAC5-208ENST00000588419 C22orf31O95567 290 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 PSAPP07602 524 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 FGFR1P11362 822 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 ATP4AP20648 1035 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 RCAN1P53805 252 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 CCT2P78371 535 aaKnown RBP15.53■□□□□ 0.08
HDAC5-208ENST00000588419 CAMK1Q14012 370 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 CTC1Q2NKJ3 1217 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 ODR4Q5SWX8 454 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 FAM102BQ5T8I3 360 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 FAM228AQ86W67 206 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 TEX2Q8IWB9 1127 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 THNSL1Q8IYQ7 743 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 KIAA0319LQ8IZA0 1049 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 SPPL3Q8TCT6 385 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 BBXQ8WY36 941 aaPredicted RBP15.53■□□□□ 0.08
HDAC5-208ENST00000588419 SCLT1Q96NL6 688 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 ZMYND12Q9H0C1 365 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 C1orf112Q9NSG2 853 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 TBC1D22BQ9NU19 505 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 VPS54Q9P1Q0 977 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 PRKAG3Q9UGI9 489 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 BARX2Q9UMQ3 279 aaPredicted RBP15.53■□□□□ 0.08
HDAC5-208ENST00000588419 PCDHB12Q9Y5F1 795 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 SNX14Q9Y5W7 946 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 C5orf42Q9H799 3197 aa15.53■□□□□ 0.08
HDAC5-208ENST00000588419 ESYT2A0FGR8 921 aa15.52■□□□□ 0.08
HDAC5-208ENST00000588419 ZBTB42B2RXF5 422 aa15.52■□□□□ 0.08
HDAC5-208ENST00000588419 CYP3A4P08684 503 aa15.52■□□□□ 0.08
HDAC5-208ENST00000588419 GNA11P29992 359 aa15.52■□□□□ 0.08
HDAC5-208ENST00000588419 SMAD2Q15796 467 aaKnown RBP15.52■□□□□ 0.08
HDAC5-208ENST00000588419 PKN1Q16512 942 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms