RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TIAM2Q8IVF5 1701 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.93□□□□□ -1.46
VAPA-203ENST00000577539 MYH6P13533 1939 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 FLT1P17948 1338 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 AKR1B10O60218 316 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 RHOBTB3O94955 611 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 SERPINB2P05120 415 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 MATR3P43243 847 aaKnown RBP eCLIP5.93□□□□□ -1.46
VAPA-203ENST00000577539 ADCY7P51828 1080 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 FAM193AP78312 1265 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 KCNB1Q14721 858 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 BRD3Q15059 726 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 UBE2SQ16763 222 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 KRT79Q5XKE5 535 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 PRR5LQ6MZQ0 368 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 TTI2Q6NXR4 508 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 CNNM4Q6P4Q7 775 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 CACNA2D4Q7Z3S7 1137 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 NOA1Q8NC60 698 aaKnown RBP5.93□□□□□ -1.46
VAPA-203ENST00000577539 GIMAP8Q8ND71 665 aaPredicted RBP5.93□□□□□ -1.46
VAPA-203ENST00000577539 EHBP1Q8NDI1 1231 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 GJA10Q969M2 543 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 PNKPQ96T60 521 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 PSMB7Q99436 277 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 RAB34Q9BZG1 259 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 THAP9Q9H5L6 903 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 HAUS4Q9H6D7 363 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 PDE11AQ9HCR9 933 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 KBTBD4Q9NVX7 518 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 VPS18Q9P253 973 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 PDS5AQ29RF7 1337 aaKnown RBP5.92□□□□□ -1.46
VAPA-203ENST00000577539 LAD1O00515 517 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 KLRC4O43908 158 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 MICAL2O94851 1124 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 KRT18P05783 430 aaKnown RBP5.92□□□□□ -1.46
VAPA-203ENST00000577539 ARHGAP25P42331 645 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 KIF5AQ12840 1032 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 IKQ13123 557 aaPredicted RBP5.92□□□□□ -1.46
VAPA-203ENST00000577539 WHAMMP3Q1A5X7 153 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 C4orf17Q53FE4 359 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 TDRD12Q587J7 1177 aaKnown RBP5.92□□□□□ -1.46
VAPA-203ENST00000577539 KRT26Q7Z3Y9 468 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 C2CD5Q86YS7 1000 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 GPR152Q8TDT2 470 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 SUSD3Q96L08 255 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 AK8Q96MA6 479 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 ZMYND12Q9H0C1 365 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 IRF2BPLQ9H1B7 796 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 ZFAND3Q9H8U3 227 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 MYH13Q9UKX3 1938 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 CREB3O43889 395 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 EIF3JO75822 258 aaKnown RBP5.92□□□□□ -1.46
VAPA-203ENST00000577539 PTGIRP43119 386 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 VSNL1P62760 191 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 CCDC40Q4G0X9 1142 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 C4orf46Q504U0 113 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 HDXQ7Z353 690 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 CNPY4Q8N129 248 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 ANKRD13CQ8N6S4 541 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 LRRC15Q8TF66 581 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 NOC3LQ8WTT2 800 aaKnown RBP5.92□□□□□ -1.46
VAPA-203ENST00000577539 ANKS1AQ92625 1134 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 RBM17Q96I25 401 aaKnown RBP5.92□□□□□ -1.46
VAPA-203ENST00000577539 SPZ1Q9BXG8 430 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 FUT8Q9BYC5 575 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 GBP3Q9H0R5 595 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 ZFYVE28Q9HCC9 887 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 SALL4Q9UJQ4 1053 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 SAR1BQ9Y6B6 198 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 STRCQ7RTU9 1775 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 ATP1A1P05023 1023 aaKnown RBP5.92□□□□□ -1.46
VAPA-203ENST00000577539 SLURP2P0DP57 97 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 AKR1B1P15121 316 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 RBM5P52756 815 aaKnown RBP eCLIP5.92□□□□□ -1.46
VAPA-203ENST00000577539 ARID5AQ03989 594 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 TUBB2AQ13885 445 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 SKIDA1Q1XH10 827 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 IER5Q5VY09 327 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 TTBK2Q6IQ55 1244 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 C16orf86Q6ZW13 317 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 NELFCDQ8IXH7 590 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 TUBB2BQ9BVA1 445 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 MXD3Q9BW11 206 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 ZC3H12CQ9C0D7 883 aaKnown RBP5.92□□□□□ -1.46
VAPA-203ENST00000577539 CUEDC2Q9H467 287 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 ANKZF1Q9H8Y5 726 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 NHEJ1Q9H9Q4 299 aaPredicted RBP5.92□□□□□ -1.46
VAPA-203ENST00000577539 CAPN11Q9UMQ6 739 aa5.92□□□□□ -1.46
VAPA-203ENST00000577539 REXO2Q9Y3B8 237 aaKnown RBP5.92□□□□□ -1.46
VAPA-203ENST00000577539 NHSL1Q5SYE7 1610 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 CACNA1SQ13698 1873 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 GPR75-ASB3A0A0A6YYF3 556 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 A0A1W2PQC6 194 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 MYMKA6NI61 221 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 TRAF5O00463 557 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 ATP8B1O43520 1251 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 USO1O60763 962 aaKnown RBP5.91□□□□□ -1.46
VAPA-203ENST00000577539 MYL1P05976 194 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 SRGNP10124 158 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 PAX3P23760 479 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms