RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ZFYVE21Q9BQ24 234 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 PCDH12Q9NPG4 1184 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 AP5S1Q9NUS5 200 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 HDAC9Q9UKV0 1011 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 NOP58Q9Y2X3 529 aaKnown RBP7.05□□□□□ -1.28
SF3B3-214ENST00000572365 KIF20BQ96Q89 1820 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 TONSLQ96HA7 1378 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 TRBV23OR9-2A0A075B6M9 112 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 A1BGP04217 495 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 HSP90AB1P08238 724 aaKnown RBP7.04□□□□□ -1.28
SF3B3-214ENST00000572365 MYCLP1P12525 358 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-214ENST00000572365 IBSPP21815 317 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-214ENST00000572365 LTBRP36941 435 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 STAT3P40763 770 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 ST5P78524 1137 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 EGR3Q06889 387 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 NOGQ13253 232 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 KCNAB2Q13303 367 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 AOC3Q16853 763 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 C1orf141Q5JVX7 400 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 PRSS36Q5K4E3 855 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 IQCEQ6IPM2 695 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 USP50Q70EL3 339 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-214ENST00000572365 LRRTM3Q86VH5 581 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 PTCHD1Q96NR3 888 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 MMP19Q99542 508 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 CDADC1Q9BWV3 514 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 GPR27Q9NS67 375 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 CLEC1BQ9P126 229 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 POLKQ9UBT6 870 aa7.04□□□□□ -1.28
SF3B3-214ENST00000572365 TMEFF2Q9UIK5 374 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-214ENST00000572365 WASHC2AQ641Q2 1341 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 ARFGEF2Q9Y6D5 1785 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 NPHP3-ACAD11A0A0J9YXS1 232 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 GSG1L2A8MUP6 293 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 AQP7O14520 342 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 PDE8AO60658 829 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 FKTNO75072 461 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 PAMP19021 973 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 EN2P19622 333 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-214ENST00000572365 GMPSP49915 693 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-214ENST00000572365 EIF5P55010 431 aaKnown RBP7.03□□□□□ -1.28
SF3B3-214ENST00000572365 AMPD3Q01432 767 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 RGMBQ6NW40 437 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 KCNT2Q6UVM3 1135 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 CYP2R1Q6VVX0 501 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 FGD2Q7Z6J4 655 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 NBPF5PQ86XG9 351 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-214ENST00000572365 STK11IPQ8N1F8 1099 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 MAGEB10Q96LZ2 347 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-214ENST00000572365 PHF20Q9BVI0 1012 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 R3HDMLQ9H3Y0 253 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 BSDC1Q9NW68 430 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-214ENST00000572365 SCAF8Q9UPN6 1271 aaKnown RBP7.03□□□□□ -1.28
SF3B3-214ENST00000572365 MAPRE3Q9UPY8 281 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 TRAF6Q9Y4K3 522 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 PAPPA2Q9BXP8 1791 aa7.03□□□□□ -1.28
SF3B3-214ENST00000572365 hCG_2014768A0A024R1R8 64 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 RAD17O75943 681 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 ASLP04424 464 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 FURINP09958 794 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 NPR1P16066 1061 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 NAT1P18440 290 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 POU3F2P20265 443 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-214ENST00000572365 GRIK1P39086 918 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 GPR85P60893 370 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 RTKN2Q8IZC4 609 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 CHAC2Q8WUX2 184 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 DDX1Q92499 740 aaKnown RBP7.02□□□□□ -1.29
SF3B3-214ENST00000572365 DIO2Q92813 273 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 TESK2Q96S53 571 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 CAAP1Q9H8G2 361 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 ADARB2Q9NS39 739 aaKnown RBP7.02□□□□□ -1.29
SF3B3-214ENST00000572365 ERVK13-1Q9NX77 482 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 GPRC5DQ9NZD1 345 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 LMCD1Q9NZU5 365 aa7.02□□□□□ -1.29
SF3B3-214ENST00000572365 ANKRD26Q9UPS8 1709 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 TCRBV16S1A1N1A0A5B0 115 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 ADM5C9JUS6 153 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 CAMTA2O94983 1202 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 CRTAMO95727 393 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 RPL10P27635 214 aaKnown RBP7.01□□□□□ -1.29
SF3B3-214ENST00000572365 IGBP1P78318 339 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 CXCL9Q07325 125 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 SULT6B1Q6IMI4 303 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 ZPBP2Q6X784 338 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 MOB2Q70IA6 237 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 RNF180Q86T96 592 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 IFNL3Q8IZI9 196 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 TMEM52Q8NDY8 209 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.01□□□□□ -1.29
SF3B3-214ENST00000572365 FCRL2Q96LA5 508 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-214ENST00000572365 POLR3GLQ9BT43 218 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 TARS2Q9BW92 718 aaKnown RBP7.01□□□□□ -1.29
SF3B3-214ENST00000572365 SEMA6BQ9H3T3 888 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 TNPO3Q9Y5L0 923 aaKnown RBP7.01□□□□□ -1.29
SF3B3-214ENST00000572365 NCAPD2Q15021 1401 aa7.01□□□□□ -1.29
SF3B3-214ENST00000572365 TAF1P21675 1872 aa7□□□□□ -1.29
SF3B3-214ENST00000572365 H0YGN5 161 aa7□□□□□ -1.29
SF3B3-214ENST00000572365 RASGRP1O95267 797 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms