RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-208	ENST00000570688	CDHR5	Q9HBB8	845 aa		12.51	□□□□□ -0.41
ABR-208	ENST00000570688	XPNPEP1	Q9NQW7	623 aa		12.51	□□□□□ -0.41
ABR-208	ENST00000570688	DAXX	Q9UER7	740 aa	Predicted RBP	12.51	□□□□□ -0.41
ABR-208	ENST00000570688	TUBE1	Q9UJT0	475 aa		12.51	□□□□□ -0.41
ABR-208	ENST00000570688	TRIOBP	Q9H2D6	2365 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688		A0A087X0B3	334 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	LAD1	O00515	517 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	MARCH6	O60337	910 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	NBN	O60934	754 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	CHRNA1	P02708	482 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	CKB	P12277	381 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	CSF2RA	P15509	400 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	PDIA5	Q14554	519 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	MTERF2	Q49AM1	385 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	XKR3	Q5GH77	459 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	AXDND1	Q5T1B0	1012 aa	Predicted RBP	12.5	□□□□□ -0.41
ABR-208	ENST00000570688	ARL6IP4	Q66PJ3	421 aa	Known RBP	12.5	□□□□□ -0.41
ABR-208	ENST00000570688	TPH2	Q8IWU9	490 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	KIAA0319L	Q8IZA0	1049 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	LRRC71	Q8N4P6	559 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	PIGO	Q8TEQ8	1089 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	DNAJB3	Q8WWF6	145 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	POLR3C	Q9BUI4	534 aa	Predicted RBP	12.5	□□□□□ -0.41
ABR-208	ENST00000570688	CSRNP2	Q9H175	543 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	LRWD1	Q9UFC0	647 aa		12.5	□□□□□ -0.41
ABR-208	ENST00000570688	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.5	□□□□□ -0.41
ABR-208	ENST00000570688	COL1A2	P08123	1366 aa		12.49	□□□□□ -0.41
ABR-208	ENST00000570688	DDX11L8	A8MPP1	907 aa		12.49	□□□□□ -0.41
ABR-208	ENST00000570688	TLR3	O15455	904 aa	Known RBP	12.49	□□□□□ -0.41
ABR-208	ENST00000570688	IQCF3	P0C7M6	154 aa		12.49	□□□□□ -0.41
ABR-208	ENST00000570688	ACR	P10323	421 aa		12.49	□□□□□ -0.41
ABR-208	ENST00000570688	RPA1	P27694	616 aa		12.49	□□□□□ -0.41
ABR-208	ENST00000570688	YWHAB	P31946	246 aa	Known RBP	12.49	□□□□□ -0.41
ABR-208	ENST00000570688	CLCN3	P51790	818 aa		12.49	□□□□□ -0.41
ABR-208	ENST00000570688	ZNF484	Q5JVG2	852 aa		12.49	□□□□□ -0.41
ABR-208	ENST00000570688	C9orf50	Q5SZB4	431 aa		12.49	□□□□□ -0.41
ABR-208	ENST00000570688	HYI	Q5T013	277 aa		12.49	□□□□□ -0.41
ABR-208	ENST00000570688	MFSD5	Q6N075	450 aa		12.49	□□□□□ -0.41
ABR-208	ENST00000570688	DTHD1	Q6ZMT9	781 aa		12.49	□□□□□ -0.41
ABR-208	ENST00000570688	CKAP2L	Q8IYA6	745 aa		12.49	□□□□□ -0.41
ABR-208	ENST00000570688	EPSTI1	Q96J88	318 aa		12.49	□□□□□ -0.41
ABR-208	ENST00000570688	ZSWIM4	Q9H7M6	989 aa		12.49	□□□□□ -0.41
ABR-208	ENST00000570688	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.49	□□□□□ -0.41
ABR-208	ENST00000570688	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.49	□□□□□ -0.41
ABR-208	ENST00000570688	PCDHA2	Q9Y5H9	948 aa		12.49	□□□□□ -0.41
ABR-208	ENST00000570688	RRN3P2	A6NIE6	340 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688		E9PMD0	336 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	PITPNM1	O00562	1244 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	CTSH	P09668	335 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	RAG1	P15918	1043 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	RARRES1	P49788	294 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	TMEM62	Q0P6H9	643 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	TMEM119	Q4V9L6	283 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	FAM26D	Q5JW98	314 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	RPAIN	Q86UA6	219 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	SNX29	Q8TEQ0	813 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	TMEM40	Q8WWA1	233 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	ZNF668	Q96K58	619 aa	Predicted RBP	12.48	□□□□□ -0.41
ABR-208	ENST00000570688	FAM167A	Q96KS9	214 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	PLIN2	Q99541	437 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	FAM49A	Q9H0Q0	323 aa	Predicted RBP	12.48	□□□□□ -0.41
ABR-208	ENST00000570688	DHX33	Q9H6R0	707 aa	Known RBP	12.48	□□□□□ -0.41
ABR-208	ENST00000570688	POLD4	Q9HCU8	107 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	TUFT1	Q9NNX1	390 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	CYP26B1	Q9NR63	512 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	BLOC1S4	Q9NUP1	217 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	TCEAL9	Q9UHQ7	104 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	SRPRB	Q9Y5M8	271 aa	Known RBP	12.48	□□□□□ -0.41
ABR-208	ENST00000570688	NR2E3	Q9Y5X4	410 aa		12.48	□□□□□ -0.41
ABR-208	ENST00000570688	LAMA3	Q16787	3333 aa		12.47	□□□□□ -0.41
ABR-208	ENST00000570688	MICAL3	Q7RTP6	2002 aa		12.47	□□□□□ -0.41
ABR-208	ENST00000570688	SMIM35	A0A1B0GVV1	85 aa		12.47	□□□□□ -0.41
ABR-208	ENST00000570688	MAF	O75444	373 aa	Predicted RBP	12.47	□□□□□ -0.41
ABR-208	ENST00000570688	VTN	P04004	478 aa		12.47	□□□□□ -0.41
ABR-208	ENST00000570688	THPO	P40225	353 aa		12.47	□□□□□ -0.41
ABR-208	ENST00000570688	CCT6A	P40227	531 aa	Known RBP	12.47	□□□□□ -0.41
ABR-208	ENST00000570688	NAALADL2	Q58DX5	795 aa		12.47	□□□□□ -0.41
ABR-208	ENST00000570688	SHC4	Q6S5L8	630 aa		12.47	□□□□□ -0.41
ABR-208	ENST00000570688	LRRC8D	Q7L1W4	858 aa		12.47	□□□□□ -0.41
ABR-208	ENST00000570688	NEK9	Q8TD19	979 aa		12.47	□□□□□ -0.41
ABR-208	ENST00000570688	PPP1R16B	Q96T49	567 aa		12.47	□□□□□ -0.41
ABR-208	ENST00000570688	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
ABR-208	ENST00000570688	AGO3	Q9H9G7	860 aa	Known RBP	12.47	□□□□□ -0.41
ABR-208	ENST00000570688	GDPD2	Q9HCC8	539 aa		12.47	□□□□□ -0.41
ABR-208	ENST00000570688	DDX19A	Q9NUU7	478 aa	Known RBP	12.47	□□□□□ -0.41
ABR-208	ENST00000570688	RCOR1	Q9UKL0	485 aa		12.47	□□□□□ -0.41
ABR-208	ENST00000570688	KIAA1024	Q9UPX6	916 aa		12.47	□□□□□ -0.41
ABR-208	ENST00000570688	SPTLC2	O15270	562 aa		12.46	□□□□□ -0.41
ABR-208	ENST00000570688	GPR32	O75388	356 aa		12.46	□□□□□ -0.41
ABR-208	ENST00000570688	YEATS4	O95619	227 aa		12.46	□□□□□ -0.41
ABR-208	ENST00000570688	CXCL10	P02778	98 aa		12.46	□□□□□ -0.41
ABR-208	ENST00000570688	SELP	P16109	830 aa		12.46	□□□□□ -0.41
ABR-208	ENST00000570688	KARS	Q15046	597 aa	Known RBP	12.46	□□□□□ -0.41
ABR-208	ENST00000570688	TMEM266	Q2M3C6	531 aa		12.46	□□□□□ -0.41
ABR-208	ENST00000570688	XKR9	Q5GH70	373 aa		12.46	□□□□□ -0.41
ABR-208	ENST00000570688	TMEM240	Q5SV17	173 aa		12.46	□□□□□ -0.41
ABR-208	ENST00000570688	EFCAB12	Q6NXP0	572 aa		12.46	□□□□□ -0.41
ABR-208	ENST00000570688	CHRDL2	Q6WN34	429 aa		12.46	□□□□□ -0.41
ABR-208	ENST00000570688	KSR1	Q8IVT5	923 aa		12.46	□□□□□ -0.41
ABR-208	ENST00000570688	CAGE1	Q8TC20	777 aa		12.46	□□□□□ -0.41

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