RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 MINDY4Q4G0A6 757 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 C4orf46Q504U0 113 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 FAM47CQ5HY64 1035 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 DENND5AQ6IQ26 1287 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 G2E3Q7L622 706 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 SVIPQ8NHG7 77 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 SYTL4Q96C24 671 aaPredicted RBP8.52□□□□□ -1.05
CNOT1-222ENST00000570139 GCC1Q96CN9 775 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 SLC39A13Q96H72 371 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 AHCYL2Q96HN2 611 aaKnown RBP8.52□□□□□ -1.05
CNOT1-222ENST00000570139 B4GALT6Q9UBX8 382 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 TPX2Q9ULW0 747 aaKnown RBP8.52□□□□□ -1.05
CNOT1-222ENST00000570139 ANKRD6Q9Y2G4 727 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 PALLDQ8WX93 1383 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 ANKRD36CQ5JPF3 1778 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.51□□□□□ -1.05
CNOT1-222ENST00000570139 PI4KAP2A4QPH2 592 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 SART1O43290 800 aaKnown RBP8.51□□□□□ -1.05
CNOT1-222ENST00000570139 GAS2O43903 313 aaKnown RBP8.51□□□□□ -1.05
CNOT1-222ENST00000570139 CFBP00751 764 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 GNAI2P04899 355 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 CD3EP07766 207 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 KIZQ2M2Z5 673 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 TMEM177Q53S58 311 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 TMEM240Q5SV17 173 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 IQCEQ6IPM2 695 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 KSR1Q8IVT5 923 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 PI4KAP1Q8N8J0 262 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 LINS1Q8NG48 757 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 NPLOC4Q8TAT6 608 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 FRS2Q8WU20 508 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 FUBP3Q96I24 572 aaKnown RBP eCLIP8.51□□□□□ -1.05
CNOT1-222ENST00000570139 CEP41Q9BYV8 373 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 THG1LQ9NWX6 298 aaKnown RBP8.51□□□□□ -1.05
CNOT1-222ENST00000570139 OBP2AQ9NY56 170 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 ASAP1Q9ULH1 1129 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 GIT1Q9Y2X7 761 aa8.51□□□□□ -1.05
CNOT1-222ENST00000570139 RGPD3A6NKT7 1758 aaPredicted RBP8.5□□□□□ -1.05
CNOT1-222ENST00000570139 RGPD4Q7Z3J3 1758 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 COL15A1P39059 1388 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 PRAMEF22A3QJZ6 481 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 C2orf71A6NGG8 1288 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 VSTM5A8MXK1 200 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 AURKAO14965 403 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 PRPF3O43395 683 aaKnown RBP8.5□□□□□ -1.05
CNOT1-222ENST00000570139 PRAMEF1O95521 474 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 VCAM1P19320 739 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 KIR3DL1P43629 444 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 SEPHS1P49903 392 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 ERVK-21P61565 698 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 RBM6P78332 1123 aaKnown RBP8.5□□□□□ -1.05
CNOT1-222ENST00000570139 KRT85P78386 507 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 NMIQ13287 307 aaPredicted RBP8.5□□□□□ -1.05
CNOT1-222ENST00000570139 TCIRG1Q13488 830 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 BEND3Q5T5X7 828 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 LBX2Q6XYB7 198 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 TMC3Q7Z5M5 1100 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 CBARPQ8N350 705 aaPredicted RBP8.5□□□□□ -1.05
CNOT1-222ENST00000570139 TMEM130Q8N3G9 435 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 ANKRD44Q8N8A2 993 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 PLBD2Q8NHP8 589 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 ENOX1Q8TC92 643 aaKnown RBP8.5□□□□□ -1.05
CNOT1-222ENST00000570139 PSMG3-AS1Q96PY0 264 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 COQ6Q9Y2Z9 468 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 USP16Q9Y5T5 823 aa8.5□□□□□ -1.05
CNOT1-222ENST00000570139 BCORQ6W2J9 1755 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 WDR64B1ANS9 1081 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 TRAF5O00463 557 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 NBPF7P0C2Y1 421 aaPredicted RBP8.49□□□□□ -1.05
CNOT1-222ENST00000570139 UBTFL1P0CB47 393 aaPredicted RBP8.49□□□□□ -1.05
CNOT1-222ENST00000570139 MYL6BP14649 208 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 ELNP15502 786 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 CYP2C19P33261 490 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 IL6STP40189 918 aaPredicted RBP8.49□□□□□ -1.05
CNOT1-222ENST00000570139 IARSP41252 1262 aaKnown RBP8.49□□□□□ -1.05
CNOT1-222ENST00000570139 INAVAQ3KP66 663 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 HSP90AB3PQ58FF7 597 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 KIF6Q6ZMV9 814 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 COPS6Q7L5N1 327 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 PNMA8AQ86V59 439 aaPredicted RBP8.49□□□□□ -1.05
CNOT1-222ENST00000570139 DTWD2Q8NBA8 298 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 PCDH19Q8TAB3 1148 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 METTL22Q9BUU2 404 aaPredicted RBP8.49□□□□□ -1.05
CNOT1-222ENST00000570139 SEMA6CQ9H3T2 930 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 MAP3K2Q9Y2U5 619 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 MRFAP1Q9Y605 127 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 BRWD3Q6RI45 1802 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 UTYO14607 1347 aa8.49□□□□□ -1.05
CNOT1-222ENST00000570139 IFRD1O00458 451 aaPredicted RBP8.48□□□□□ -1.05
CNOT1-222ENST00000570139 ERC2O15083 957 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 LRRN2O75325 713 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 MT-CO1P00395 513 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 CKMP06732 381 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 SRGAP2CP0DJJ0 459 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 PF4V1P10720 104 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 CYP19A1P11511 503 aaPredicted RBP8.48□□□□□ -1.05
CNOT1-222ENST00000570139 GTF2H3Q13889 308 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 ARHGAP44Q17R89 818 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 PROSER3Q2NL68 480 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 CPA6Q8N4T0 437 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms