RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 FOXRED1Q96CU9 486 aaPredicted RBP6.27□□□□□ -1.41
LINC00560-201ENST00000564593 RNF38Q9H0F5 515 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 NSUN3Q9H649 340 aaKnown RBP6.27□□□□□ -1.41
LINC00560-201ENST00000564593 DCP1AQ9NPI6 582 aaPredicted RBP6.27□□□□□ -1.41
LINC00560-201ENST00000564593 FBLN1P23142 703 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 PTGS1P23219 599 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 NCKAP1LP55160 1127 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 PFKPQ01813 784 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 TARBP2Q15633 366 aaKnown RBP6.27□□□□□ -1.41
LINC00560-201ENST00000564593 VASNQ6EMK4 673 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 PRR23BQ6ZRT6 265 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 ESPNLQ6ZVH7 1005 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 PROSER1Q86XN7 944 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 AMOTL1Q8IY63 956 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 C1orf162Q8NEQ5 155 aaPredicted RBP6.27□□□□□ -1.41
LINC00560-201ENST00000564593 HOOK2Q96ED9 719 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 FAXDC2Q96IV6 333 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 ACAP3Q96P50 834 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 ANO3Q9BYT9 981 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 EPB41L4BQ9H329 900 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 SEMA4AQ9H3S1 761 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 POFUT1Q9H488 388 aa6.27□□□□□ -1.41
LINC00560-201ENST00000564593 IRS2Q9Y4H2 1338 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 ZNF839A8K0R7 811 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 AKAP10O43572 662 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 PEX10O60683 326 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 APOL3O95236 402 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 C8BP07358 591 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 MC3RP41968 323 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 GPR3P46089 330 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 SLC6A3Q01959 620 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 NFE2Q16621 373 aaPredicted RBP6.26□□□□□ -1.41
LINC00560-201ENST00000564593 PRAMEF9Q5VWM5 478 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 TMC5Q6UXY8 1006 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 LIPIQ6XZB0 460 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 LDHDQ86WU2 507 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 CXorf67Q86X51 503 aaPredicted RBP6.26□□□□□ -1.41
LINC00560-201ENST00000564593 IGDCC4Q8TDY8 1250 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 TGFBRAP1Q8WUH2 860 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 MAML3Q96JK9 1138 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 FOXB1Q99853 325 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 CNTD2Q9H8S5 307 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 KCNK12Q9HB15 430 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 INCENPQ9NQS7 918 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 MKS1Q9NXB0 559 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 FAM53CQ9NYF3 392 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 ZIM2Q9NZV7 527 aa6.26□□□□□ -1.41
LINC00560-201ENST00000564593 NFIBO00712 420 aa6.25□□□□□ -1.41
LINC00560-201ENST00000564593 H2AFYO75367 372 aaKnown RBP6.25□□□□□ -1.41
LINC00560-201ENST00000564593 PRPF6O94906 941 aaKnown RBP6.25□□□□□ -1.41
LINC00560-201ENST00000564593 PRLP01236 227 aa6.25□□□□□ -1.41
LINC00560-201ENST00000564593 CYP2C8P10632 490 aa6.25□□□□□ -1.41
LINC00560-201ENST00000564593 PFKLP17858 780 aa6.25□□□□□ -1.41
LINC00560-201ENST00000564593 ALDH6A1Q02252 535 aaKnown RBP6.25□□□□□ -1.41
LINC00560-201ENST00000564593 PIN1Q13526 163 aaPredicted RBP6.25□□□□□ -1.41
LINC00560-201ENST00000564593 PPP2R5AQ15172 486 aa6.25□□□□□ -1.41
LINC00560-201ENST00000564593 PCBP2Q15366 365 aaKnown RBP eCLIP6.25□□□□□ -1.41
LINC00560-201ENST00000564593 PNMA8AQ86V59 439 aaPredicted RBP6.25□□□□□ -1.41
LINC00560-201ENST00000564593 CALML6Q8TD86 181 aa6.25□□□□□ -1.41
LINC00560-201ENST00000564593 MYL10Q9BUA6 226 aa6.25□□□□□ -1.41
LINC00560-201ENST00000564593 SLC13A1Q9BZW2 595 aa6.25□□□□□ -1.41
LINC00560-201ENST00000564593 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.25□□□□□ -1.41
LINC00560-201ENST00000564593 MRFAP1Q9Y605 127 aa6.25□□□□□ -1.41
LINC00560-201ENST00000564593 MYOCOSA0A1B0GUC4 107 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 E2F8A0AVK6 867 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 ELL2O00472 640 aaPredicted RBP6.24□□□□□ -1.41
LINC00560-201ENST00000564593 SNUPNO95149 360 aaKnown RBP6.24□□□□□ -1.41
LINC00560-201ENST00000564593 MPIG6BO95866 241 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 CLEC2LP0C7M8 214 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 RBP3P10745 1247 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 ATF2P15336 505 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 THBS2P35442 1172 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 CDR1P51861 262 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 ROM1Q03395 351 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 MOGSQ13724 837 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 CLUL1Q15846 466 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 MLANAQ16655 118 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 FSCN1Q16658 493 aaKnown RBP6.24□□□□□ -1.41
LINC00560-201ENST00000564593 CT83Q5H943 113 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 SLFN12LQ6IEE8 588 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 TTLL7Q6ZT98 887 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 SMARCC2Q8TAQ2 1214 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 FERMT2Q96AC1 680 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 SLC38A3Q99624 504 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 AMNQ9BXJ7 453 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 MCOLN1Q9GZU1 580 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 GALNT8Q9NY28 637 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 MBD1Q9UIS9 605 aaPredicted RBP6.24□□□□□ -1.41
LINC00560-201ENST00000564593 WASF3Q9UPY6 502 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 FAN1Q9Y2M0 1017 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 LUC7L2Q9Y383 392 aaKnown RBP6.24□□□□□ -1.41
LINC00560-201ENST00000564593 PCDHA5Q9Y5H7 936 aa6.24□□□□□ -1.41
LINC00560-201ENST00000564593 PRSS38A1L453 326 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 LRRC10BA6NIK2 292 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 TRIM75PA6NK02 468 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 FZD9O00144 591 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 ENPP1P22413 925 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 RGS3P49796 1198 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 MANFP55145 182 aaKnown RBP6.23□□□□□ -1.41
LINC00560-201ENST00000564593 ADCY2Q08462 1091 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms