RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 FOXP1Q9H334 677 aaPredicted RBP17.71■□□□□ 0.43
USB1-208ENST00000563207 HSP90AA1P07900 732 aaKnown RBP17.7■□□□□ 0.42
USB1-208ENST00000563207 LINC00271P0C7V0 271 aa17.7■□□□□ 0.42
USB1-208ENST00000563207 ATP4AP20648 1035 aa17.7■□□□□ 0.42
USB1-208ENST00000563207 CD52P31358 61 aa17.7■□□□□ 0.42
USB1-208ENST00000563207 MRPS6P82932 125 aaKnown RBP17.7■□□□□ 0.42
USB1-208ENST00000563207 LARP1BQ659C4 914 aaKnown RBP17.7■□□□□ 0.42
USB1-208ENST00000563207 ABHD15Q6UXT9 468 aa17.7■□□□□ 0.42
USB1-208ENST00000563207 NIPA1Q7RTP0 329 aa17.7■□□□□ 0.42
USB1-208ENST00000563207 TRMT1LQ7Z2T5 733 aaKnown RBP17.7■□□□□ 0.42
USB1-208ENST00000563207 CCDC60Q8IWA6 550 aaPredicted RBP17.7■□□□□ 0.42
USB1-208ENST00000563207 DIS3L2Q8IYB7 885 aaKnown RBP17.7■□□□□ 0.42
USB1-208ENST00000563207 HLA-CQ95604 372 aa17.7■□□□□ 0.42
USB1-208ENST00000563207 AZI2Q9H6S1 392 aa17.7■□□□□ 0.42
USB1-208ENST00000563207 CDHR5Q9HBB8 845 aa17.7■□□□□ 0.42
USB1-208ENST00000563207 EVPLQ92817 2033 aa17.69■□□□□ 0.42
USB1-208ENST00000563207 IGKV6D-21A0A0A0MT36 114 aa17.69■□□□□ 0.42
USB1-208ENST00000563207 CIITAP33076 1130 aa17.69■□□□□ 0.42
USB1-208ENST00000563207 PLPPR4Q7Z2D5 763 aa17.69■□□□□ 0.42
USB1-208ENST00000563207 TMEM192Q8IY95 271 aa17.69■□□□□ 0.42
USB1-208ENST00000563207 TBCKQ8TEA7 893 aa17.69■□□□□ 0.42
USB1-208ENST00000563207 APBB2Q92870 758 aa17.69■□□□□ 0.42
USB1-208ENST00000563207 NAP1L4Q99733 375 aaKnown RBP17.69■□□□□ 0.42
USB1-208ENST00000563207 RAPGEFL1Q9UHV5 662 aa17.69■□□□□ 0.42
USB1-208ENST00000563207 POTEB3A0JP26 581 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 BDP1A6H8Y1 2624 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 RRN3P2A6NIE6 340 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 BTBD18B2RXH4 712 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 H3BQV1 296 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 TMEM266Q2M3C6 531 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 SWSAP1Q6NVH7 229 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 POTEBQ6S5H4 581 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 MTHFD1LQ6UB35 978 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 MOXD1Q6UVY6 613 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 OXER1Q8TDS5 423 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 TNFRSF25Q93038 417 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 GJA10Q969M2 543 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 PPP1R16BQ96T49 567 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 RC3H2Q9HBD1 1191 aaKnown RBP17.68■□□□□ 0.42
USB1-208ENST00000563207 LMCD1Q9NZU5 365 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 PCDHA2Q9Y5H9 948 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 WDR81Q562E7 1941 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 KIAA1671Q9BY89 1806 aa17.68■□□□□ 0.42
USB1-208ENST00000563207 RALGAPA2Q2PPJ7 1873 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 CYP3A7-CYP3A51PA0A087WV96 503 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 ZBTB42B2RXF5 422 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 IPO5O00410 1097 aaKnown RBP17.67■□□□□ 0.42
USB1-208ENST00000563207 BACH1O14867 736 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 CYP3A7P24462 503 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 U2AF2P26368 475 aaKnown RBP eCLIP17.67■□□□□ 0.42
USB1-208ENST00000563207 KLRC1P26715 233 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 GATMP50440 423 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 SETQ01105 290 aaPredicted RBP17.67■□□□□ 0.42
USB1-208ENST00000563207 GUCY1B3Q02153 619 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 NR5A1Q13285 461 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 GPM6BQ13491 265 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 GNL2Q13823 731 aaKnown RBP17.67■□□□□ 0.42
USB1-208ENST00000563207 TSHZ1Q6ZSZ6 1077 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 RSPH3Q86UC2 560 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 KHSRPQ92945 711 aaKnown RBP eCLIP17.67■□□□□ 0.42
USB1-208ENST00000563207 TMX1Q9H3N1 280 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 PADI3Q9ULW8 664 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 COG5Q9UP83 839 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 TTC3P53804 2025 aa17.67■□□□□ 0.42
USB1-208ENST00000563207 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.66■□□□□ 0.42
USB1-208ENST00000563207 H3BNC9 293 aa17.66■□□□□ 0.42
USB1-208ENST00000563207 CSPG5O95196 566 aa17.66■□□□□ 0.42
USB1-208ENST00000563207 GCFC2P16383 781 aaKnown RBP17.66■□□□□ 0.42
USB1-208ENST00000563207 IBSPP21815 317 aaPredicted RBP17.66■□□□□ 0.42
USB1-208ENST00000563207 FOSBP53539 338 aa17.66■□□□□ 0.42
USB1-208ENST00000563207 PRR16Q569H4 304 aa17.66■□□□□ 0.42
USB1-208ENST00000563207 PPP4R3AQ6IN85 833 aa17.66■□□□□ 0.42
USB1-208ENST00000563207 PIK3AP1Q6ZUJ8 805 aa17.66■□□□□ 0.42
USB1-208ENST00000563207 NEK8Q86SG6 692 aa17.66■□□□□ 0.42
USB1-208ENST00000563207 CRIPAKQ8N1N5 446 aa17.66■□□□□ 0.42
USB1-208ENST00000563207 LENG9Q96B70 501 aa17.66■□□□□ 0.42
USB1-208ENST00000563207 ZNF577Q9BSK1 485 aa17.66■□□□□ 0.42
USB1-208ENST00000563207 CD320Q9NPF0 282 aa17.66■□□□□ 0.42
USB1-208ENST00000563207 TRPV2Q9Y5S1 764 aa17.66■□□□□ 0.42
USB1-208ENST00000563207 BRWD1Q9NSI6 2320 aa17.65■□□□□ 0.42
USB1-208ENST00000563207 GRM6O15303 877 aa17.65■□□□□ 0.42
USB1-208ENST00000563207 MGEA5O60502 916 aa17.65■□□□□ 0.42
USB1-208ENST00000563207 INF2Q27J81 1249 aa17.65■□□□□ 0.42
USB1-208ENST00000563207 AAK1Q2M2I8 961 aa17.65■□□□□ 0.42
USB1-208ENST00000563207 NOSTRINQ8IVI9 506 aa17.65■□□□□ 0.42
USB1-208ENST00000563207 KIAA0319LQ8IZA0 1049 aa17.65■□□□□ 0.42
USB1-208ENST00000563207 FIBCD1Q8N539 461 aa17.65■□□□□ 0.42
USB1-208ENST00000563207 ATP8B4Q8TF62 1192 aa17.65■□□□□ 0.42
USB1-208ENST00000563207 TMEM40Q8WWA1 233 aa17.65■□□□□ 0.42
USB1-208ENST00000563207 ZNF689Q96CS4 500 aaPredicted RBP17.65■□□□□ 0.42
USB1-208ENST00000563207 MRPL38Q96DV4 380 aaKnown RBP17.65■□□□□ 0.42
USB1-208ENST00000563207 CELF4Q9BZC1 486 aaKnown RBP17.65■□□□□ 0.42
USB1-208ENST00000563207 UBE2ZQ9H832 354 aaPredicted RBP17.65■□□□□ 0.42
USB1-208ENST00000563207 ZNF302Q9NR11 478 aa17.65■□□□□ 0.42
USB1-208ENST00000563207 GINS2Q9Y248 185 aa17.65■□□□□ 0.42
USB1-208ENST00000563207 MYH9P35579 1960 aaKnown RBP17.64■□□□□ 0.41
USB1-208ENST00000563207 SMIM35A0A1B0GVV1 85 aa17.64■□□□□ 0.41
USB1-208ENST00000563207 DGKIO75912 1065 aa17.64■□□□□ 0.41
USB1-208ENST00000563207 KCNA5P22460 613 aa17.64■□□□□ 0.41
USB1-208ENST00000563207 CTNNB1P35222 781 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms