RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 PHOSPHO2Q8TCD6 241 aa25.57■■□□□ 1.68
PABPN1-207ENST00000556821 TNPO1Q92973 898 aaKnown RBP25.57■■□□□ 1.68
PABPN1-207ENST00000556821 ZSCAN31Q96LW9 406 aaPredicted RBP25.57■■□□□ 1.68
PABPN1-207ENST00000556821 LLPHQ9BRT6 129 aaKnown RBP25.57■■□□□ 1.68
PABPN1-207ENST00000556821 SH2B1Q9NRF2 756 aaPredicted RBP25.57■■□□□ 1.68
PABPN1-207ENST00000556821 GABBR1Q9UBS5 961 aa25.57■■□□□ 1.68
PABPN1-207ENST00000556821 SAMM50Q9Y512 469 aa25.57■■□□□ 1.68
PABPN1-207ENST00000556821 PCDHA2Q9Y5H9 948 aa25.57■■□□□ 1.68
PABPN1-207ENST00000556821 RALGAPA2Q2PPJ7 1873 aa25.57■■□□□ 1.68
PABPN1-207ENST00000556821 CHMP2AO43633 222 aa25.56■■□□□ 1.68
PABPN1-207ENST00000556821 ZNF862O60290 1169 aa25.56■■□□□ 1.68
PABPN1-207ENST00000556821 KCNJ6P48051 423 aa25.56■■□□□ 1.68
PABPN1-207ENST00000556821 UGCGQ16739 394 aa25.56■■□□□ 1.68
PABPN1-207ENST00000556821 PPP2R2DQ66LE6 453 aa25.56■■□□□ 1.68
PABPN1-207ENST00000556821 PPP4R3AQ6IN85 833 aa25.56■■□□□ 1.68
PABPN1-207ENST00000556821 TMCO2Q7Z6W1 182 aaPredicted RBP25.56■■□□□ 1.68
PABPN1-207ENST00000556821 FAM49AQ9H0Q0 323 aaPredicted RBP25.56■■□□□ 1.68
PABPN1-207ENST00000556821 KCNMB3Q9NPA1 279 aa25.56■■□□□ 1.68
PABPN1-207ENST00000556821 COG5Q9UP83 839 aa25.56■■□□□ 1.68
PABPN1-207ENST00000556821 KIAA1671Q9BY89 1806 aa25.56■■□□□ 1.68
PABPN1-207ENST00000556821 BTBD18B2RXH4 712 aa25.55■■□□□ 1.68
PABPN1-207ENST00000556821 GCFC2P16383 781 aaKnown RBP25.55■■□□□ 1.68
PABPN1-207ENST00000556821 JAK3P52333 1124 aa25.55■■□□□ 1.68
PABPN1-207ENST00000556821 MRPS6P82932 125 aaKnown RBP25.55■■□□□ 1.68
PABPN1-207ENST00000556821 IKBKEQ14164 716 aa25.55■■□□□ 1.68
PABPN1-207ENST00000556821 MTHFD1LQ6UB35 978 aa25.55■■□□□ 1.68
PABPN1-207ENST00000556821 DIS3L2Q8IYB7 885 aaKnown RBP25.55■■□□□ 1.68
PABPN1-207ENST00000556821 MICALL1Q8N3F8 863 aa25.55■■□□□ 1.68
PABPN1-207ENST00000556821 BBXQ8WY36 941 aaPredicted RBP25.55■■□□□ 1.68
PABPN1-207ENST00000556821 BRMS1Q9HCU9 246 aa25.55■■□□□ 1.68
PABPN1-207ENST00000556821 CDY2AQ9Y6F7 541 aa25.55■■□□□ 1.68
PABPN1-207ENST00000556821 RFXAPO00287 272 aa25.54■■□□□ 1.68
PABPN1-207ENST00000556821 SFNP31947 248 aa25.54■■□□□ 1.68
PABPN1-207ENST00000556821 RSPH3Q86UC2 560 aa25.54■■□□□ 1.68
PABPN1-207ENST00000556821 TCF20Q9UGU0 1960 aaKnown RBP25.53■■□□□ 1.68
PABPN1-207ENST00000556821 SMIM35A0A1B0GVV1 85 aa25.53■■□□□ 1.68
PABPN1-207ENST00000556821 CCNT1O60563 726 aaKnown RBP25.53■■□□□ 1.68
PABPN1-207ENST00000556821 EFCAB14O75071 495 aa25.53■■□□□ 1.68
PABPN1-207ENST00000556821 CD2BP2O95400 341 aaKnown RBP25.53■■□□□ 1.68
PABPN1-207ENST00000556821 KLRC1P26715 233 aa25.53■■□□□ 1.68
PABPN1-207ENST00000556821 LPIN1Q14693 890 aa25.53■■□□□ 1.68
PABPN1-207ENST00000556821 ZNF484Q5JVG2 852 aa25.53■■□□□ 1.68
PABPN1-207ENST00000556821 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.53■■□□□ 1.681e-8■■■■□ 26.3
PABPN1-207ENST00000556821 POTEDQ86YR6 584 aa25.53■■□□□ 1.68
PABPN1-207ENST00000556821 CKAP2LQ8IYA6 745 aa25.53■■□□□ 1.68
PABPN1-207ENST00000556821 RDM1Q8NG50 284 aa25.53■■□□□ 1.68
PABPN1-207ENST00000556821 SEPT8Q92599 483 aa25.53■■□□□ 1.68
PABPN1-207ENST00000556821 HAS1Q92839 578 aa25.53■■□□□ 1.68
PABPN1-207ENST00000556821 TBC1D32Q96NH3 1257 aa25.53■■□□□ 1.68
PABPN1-207ENST00000556821 UPF2Q9HAU5 1272 aaKnown RBP25.53■■□□□ 1.68
PABPN1-207ENST00000556821 VAV3Q9UKW4 847 aa25.53■■□□□ 1.68
PABPN1-207ENST00000556821 PI4K2BG5E9Z4 385 aa25.52■■□□□ 1.68
PABPN1-207ENST00000556821 WNT7AO00755 349 aa25.52■■□□□ 1.68
PABPN1-207ENST00000556821 ARHGEF15O94989 841 aa25.52■■□□□ 1.68
PABPN1-207ENST00000556821 C22orf31O95567 290 aa25.52■■□□□ 1.68
PABPN1-207ENST00000556821 RPLP2P05387 115 aaKnown RBP25.52■■□□□ 1.68
PABPN1-207ENST00000556821 CA3P07451 260 aa25.52■■□□□ 1.68
PABPN1-207ENST00000556821 GHRP10912 638 aa25.52■■□□□ 1.68
PABPN1-207ENST00000556821 GUCY1B3Q02153 619 aa25.52■■□□□ 1.68
PABPN1-207ENST00000556821 TMEM62Q0P6H9 643 aa25.52■■□□□ 1.68
PABPN1-207ENST00000556821 TRIM29Q14134 588 aa25.52■■□□□ 1.68
PABPN1-207ENST00000556821 FBXO47Q5MNV8 452 aa25.52■■□□□ 1.68
PABPN1-207ENST00000556821 TRMT1LQ7Z2T5 733 aaKnown RBP25.52■■□□□ 1.68
PABPN1-207ENST00000556821 MIER3Q7Z3K6 550 aa25.52■■□□□ 1.68
PABPN1-207ENST00000556821 ALYREFQ86V81 257 aaKnown RBP25.52■■□□□ 1.68
PABPN1-207ENST00000556821 IFIH1Q9BYX4 1025 aaKnown RBP25.52■■□□□ 1.68
PABPN1-207ENST00000556821 ATG2AQ2TAZ0 1938 aa25.52■■□□□ 1.68
PABPN1-207ENST00000556821 TRANK1O15050 2925 aa25.52■■□□□ 1.68
PABPN1-207ENST00000556821 EPOPA6NHQ4 379 aa25.51■■□□□ 1.67
PABPN1-207ENST00000556821 PRKCEQ02156 737 aa25.51■■□□□ 1.67
PABPN1-207ENST00000556821 SKIV2LQ15477 1246 aaKnown RBP25.51■■□□□ 1.67
PABPN1-207ENST00000556821 FAM167AQ96KS9 214 aa25.51■■□□□ 1.67
PABPN1-207ENST00000556821 FAM20AQ96MK3 541 aa25.51■■□□□ 1.67
PABPN1-207ENST00000556821 NAP1L4Q99733 375 aaKnown RBP25.51■■□□□ 1.67
PABPN1-207ENST00000556821 COL4A6Q14031 1691 aa25.51■■□□□ 1.67
PABPN1-207ENST00000556821 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.5■■□□□ 1.67
PABPN1-207ENST00000556821 EML1O00423 815 aa25.5■■□□□ 1.67
PABPN1-207ENST00000556821 TBX3O15119 743 aa25.5■■□□□ 1.67
PABPN1-207ENST00000556821 GJB5O95377 273 aa25.5■■□□□ 1.67
PABPN1-207ENST00000556821 OATP04181 439 aa25.5■■□□□ 1.67
PABPN1-207ENST00000556821 HMGN5P82970 282 aaKnown RBP25.5■■□□□ 1.67
PABPN1-207ENST00000556821 PPP2R5CQ13362 524 aa25.5■■□□□ 1.67
PABPN1-207ENST00000556821 FNDC1Q4ZHG4 1894 aaPredicted RBP25.5■■□□□ 1.67
PABPN1-207ENST00000556821 C8orf76Q96K31 380 aa25.5■■□□□ 1.67
PABPN1-207ENST00000556821 AGO3Q9H9G7 860 aaKnown RBP25.5■■□□□ 1.67
PABPN1-207ENST00000556821 TRPV2Q9Y5S1 764 aa25.5■■□□□ 1.67
PABPN1-207ENST00000556821 KDM3AQ9Y4C1 1321 aa25.49■■□□□ 1.67
PABPN1-207ENST00000556821 ST18O60284 1047 aa25.49■■□□□ 1.67
PABPN1-207ENST00000556821 STBD1O95210 358 aa25.49■■□□□ 1.67
PABPN1-207ENST00000556821 IER5Q5VY09 327 aa25.49■■□□□ 1.67
PABPN1-207ENST00000556821 KIAA0319LQ8IZA0 1049 aa25.49■■□□□ 1.67
PABPN1-207ENST00000556821 APBB2Q92870 758 aa25.49■■□□□ 1.67
PABPN1-207ENST00000556821 CD320Q9NPF0 282 aa25.49■■□□□ 1.67
PABPN1-207ENST00000556821 LCHNA4D1U4 455 aa25.48■■□□□ 1.67
PABPN1-207ENST00000556821 SPIRE1Q08AE8 756 aa25.48■■□□□ 1.67
PABPN1-207ENST00000556821 TSHZ1Q6ZSZ6 1077 aa25.48■■□□□ 1.67
PABPN1-207ENST00000556821 LINC01465Q8N7H1 131 aa25.48■■□□□ 1.67
PABPN1-207ENST00000556821 CELF4Q9BZC1 486 aaKnown RBP25.48■■□□□ 1.67
PABPN1-207ENST00000556821 CEP131Q9UPN4 1083 aa25.48■■□□□ 1.67
PABPN1-207ENST00000556821 PRRC2BQ5JSZ5 2229 aaKnown RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms