RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 ZBTB39O15060 712 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 SLC26A4O43511 780 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 CYP2C9P11712 490 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 KLRC1P26715 233 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 TXLNAP40222 546 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 PTK7Q13308 1070 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 ECM1Q16610 540 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 XKR9Q5GH70 373 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 MTHFD1LQ6UB35 978 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 ZNF579Q8NAF0 562 aaKnown RBP15.81■□□□□ 0.12
SNX6-206ENST00000556162 RASSF8Q8NHQ8 419 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 EPSTI1Q96J88 318 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 SH2D3AQ9BRG2 576 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 PRDM5Q9NQX1 630 aaPredicted RBP15.81■□□□□ 0.12
SNX6-206ENST00000556162 CYP26B1Q9NR63 512 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 ANKEF1Q9NU02 776 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 DDX19AQ9NUU7 478 aaKnown RBP15.81■□□□□ 0.12
SNX6-206ENST00000556162 PCDHA7Q9UN72 937 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 DNM3Q9UQ16 869 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 A0A087WWV3 80 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 MBLAC1A4D2B0 266 aaPredicted RBP15.8■□□□□ 0.12
SNX6-206ENST00000556162 MAGEB2O15479 319 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 NPEPPSP55786 919 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 MLLT1Q03111 559 aaPredicted RBP15.8■□□□□ 0.12
SNX6-206ENST00000556162 TBC1D8BQ0IIM8 1120 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 TARBP2Q15633 366 aaKnown RBP15.8■□□□□ 0.12
SNX6-206ENST00000556162 PLA2G4FQ68DD2 849 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 TAF2Q6P1X5 1199 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 SERINC5Q86VE9 423 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 KCTD17Q8N5Z5 321 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 SYMPKQ92797 1274 aaKnown RBP15.8■□□□□ 0.12
SNX6-206ENST00000556162 CTAGE1Q96RT6 745 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 CCSER1Q9C0I3 900 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 PDLIM7Q9NR12 457 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 PPME1Q9Y570 386 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 HYIQ5T013 277 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 EXOC8Q8IYI6 725 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 RETREG2Q8NC44 543 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 DBR1Q9UK59 544 aaKnown RBP15.8■□□□□ 0.12
SNX6-206ENST00000556162 PCDHA2Q9Y5H9 948 aa15.8■□□□□ 0.12
SNX6-206ENST00000556162 KAT6AQ92794 2004 aa15.79■□□□□ 0.12
SNX6-206ENST00000556162 WDR81Q562E7 1941 aa15.79■□□□□ 0.12
SNX6-206ENST00000556162 BFSP2Q13515 415 aa15.79■□□□□ 0.12
SNX6-206ENST00000556162 AXDND1Q5T1B0 1012 aaPredicted RBP15.79■□□□□ 0.12
SNX6-206ENST00000556162 USP49Q70CQ1 688 aa15.79■□□□□ 0.12
SNX6-206ENST00000556162 SH3RF1Q7Z6J0 888 aa15.79■□□□□ 0.12
SNX6-206ENST00000556162 CCDC155Q8N6L0 562 aa15.79■□□□□ 0.12
SNX6-206ENST00000556162 METTL13Q8N6R0 699 aa15.79■□□□□ 0.12
SNX6-206ENST00000556162 ZBTB10Q96DT7 871 aa15.79■□□□□ 0.12
SNX6-206ENST00000556162 PNMA5Q96PV4 448 aa15.79■□□□□ 0.12
SNX6-206ENST00000556162 PLIN2Q99541 437 aa15.79■□□□□ 0.12
SNX6-206ENST00000556162 JPH2Q9BR39 696 aaPredicted RBP15.79■□□□□ 0.12
SNX6-206ENST00000556162 GDPD2Q9HCC8 539 aa15.79■□□□□ 0.12
SNX6-206ENST00000556162 CCDC39Q9UFE4 941 aa15.79■□□□□ 0.12
SNX6-206ENST00000556162 TBX21Q9UL17 535 aa15.79■□□□□ 0.12
SNX6-206ENST00000556162 KIAA0355O15063 1070 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 C22orf31O95567 290 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 TMOD1P28289 359 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 RARRES1P49788 294 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 GRB10Q13322 594 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 KARSQ15046 597 aaKnown RBP15.78■□□□□ 0.12
SNX6-206ENST00000556162 RSPH3Q86UC2 560 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 CAGE1Q8TC20 777 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 SLC7A3Q8WY07 619 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 CEP89Q96ST8 783 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 HIPK3Q9H422 1215 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 SMIM35A0A1B0GVV1 85 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 TRIM43BA6NCK2 446 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 E9PMD0 336 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 MAFO75444 373 aaPredicted RBP15.78■□□□□ 0.12
SNX6-206ENST00000556162 RPLP2P05387 115 aaKnown RBP15.78■□□□□ 0.12
SNX6-206ENST00000556162 RAG1P15918 1043 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 RFC5P40937 340 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 POLGP54098 1239 aaPredicted RBP15.78■□□□□ 0.12
SNX6-206ENST00000556162 ADALQ6DHV7 355 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 EFCAB12Q6NXP0 572 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 SHC4Q6S5L8 630 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 RUFY4Q6ZNE9 571 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 TRIM43Q96BQ3 446 aaPredicted RBP15.78■□□□□ 0.12
SNX6-206ENST00000556162 BHMT2Q9H2M3 363 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 SUGCTQ9HAC7 445 aa15.78■□□□□ 0.12
SNX6-206ENST00000556162 ARHGEF35A5YM69 484 aa15.77■□□□□ 0.11
SNX6-206ENST00000556162 EYA4O95677 639 aa15.77■□□□□ 0.11
SNX6-206ENST00000556162 THPOP40225 353 aa15.77■□□□□ 0.11
SNX6-206ENST00000556162 DNM2P50570 870 aa15.77■□□□□ 0.11
SNX6-206ENST00000556162 TMEM119Q4V9L6 283 aa15.77■□□□□ 0.11
SNX6-206ENST00000556162 DNAJB3Q8WWF6 145 aa15.77■□□□□ 0.11
SNX6-206ENST00000556162 DHX38Q92620 1227 aaKnown RBP15.77■□□□□ 0.11
SNX6-206ENST00000556162 NOC4LQ9BVI4 516 aaKnown RBP15.77■□□□□ 0.11
SNX6-206ENST00000556162 PPP1R12CQ9BZL4 782 aa15.77■□□□□ 0.11
SNX6-206ENST00000556162 FAM49AQ9H0Q0 323 aaPredicted RBP15.77■□□□□ 0.11
SNX6-206ENST00000556162 FAM13BQ9NYF5 915 aa15.77■□□□□ 0.11
SNX6-206ENST00000556162 PITPNM1O00562 1244 aa15.76■□□□□ 0.11
SNX6-206ENST00000556162 DGAT1O75907 488 aa15.76■□□□□ 0.11
SNX6-206ENST00000556162 TIMP1P01033 207 aa15.76■□□□□ 0.11
SNX6-206ENST00000556162 SYN1P17600 705 aa15.76■□□□□ 0.11
SNX6-206ENST00000556162 CSPP1Q1MSJ5 1256 aa15.76■□□□□ 0.11
SNX6-206ENST00000556162 RRAGBQ5VZM2 374 aa15.76■□□□□ 0.11
SNX6-206ENST00000556162 CCDC73Q6ZRK6 1079 aa15.76■□□□□ 0.11
SNX6-206ENST00000556162 RPAINQ86UA6 219 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms