RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	CNOT6L	Q96LI5	555 aa	Known RBP	10.49	□□□□□ -0.73
HNRNPC-223	ENST00000556142	TUBGCP2	Q9BSJ2	902 aa		10.49	□□□□□ -0.73
HNRNPC-223	ENST00000556142	PAGR1	Q9BTK6	254 aa		10.49	□□□□□ -0.73
HNRNPC-223	ENST00000556142	STRA6	Q9BX79	667 aa		10.49	□□□□□ -0.73
HNRNPC-223	ENST00000556142	POLD4	Q9HCU8	107 aa		10.49	□□□□□ -0.73
HNRNPC-223	ENST00000556142	ODF2L	Q9ULJ1	636 aa		10.49	□□□□□ -0.73
HNRNPC-223	ENST00000556142	TRAF3IP3	Q9Y228	551 aa		10.49	□□□□□ -0.73
HNRNPC-223	ENST00000556142	SLC45A1	Q9Y2W3	748 aa		10.49	□□□□□ -0.73
HNRNPC-223	ENST00000556142	COL4A3BP	Q9Y5P4	624 aa		10.49	□□□□□ -0.73
HNRNPC-223	ENST00000556142		A0A1W2PQC6	194 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	SFI1	A8K8P3	1242 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	WDR64	B1ANS9	1081 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	OFD1	O75665	1012 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	ATG7	O95352	703 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	MYB	P10242	640 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	SFPQ	P23246	707 aa	Known RBP eCLIP	10.48	□□□□□ -0.73	9e-7	■■■□□ 16.4
HNRNPC-223	ENST00000556142	COPB2	P35606	906 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	KCNJ6	P48051	423 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	TM4SF4	P48230	202 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	MARS	P56192	900 aa	Known RBP	10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	PSMC5	P62195	406 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	RBL2	Q08999	1139 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	ABHD15	Q6UXT9	468 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	FAM114A1	Q8IWE2	563 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	ANKRD20A12P	Q8NF67	263 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	ANKEF1	Q9NU02	776 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	BTBD19	C9JJ37	291 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	POTEB2	H3BUK9	544 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	RNF225	M0QZC1	329 aa	Predicted RBP	10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	PRPF6	O94906	941 aa	Known RBP	10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	KIF20A	O95235	890 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	FGFR1OP	O95684	399 aa	Known RBP	10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	GYPC	P04921	128 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	FECH	P22830	423 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	ADK	P55263	362 aa	Known RBP	10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	FKBP3	Q00688	224 aa	Known RBP	10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	KNOP1	Q1ED39	458 aa	Known RBP	10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	EDRF1	Q3B7T1	1238 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	PADI6	Q6TGC4	694 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	ZNF720	Q7Z2F6	126 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	NELFCD	Q8IXH7	590 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	SHCBP1	Q8NEM2	672 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	MORC4	Q8TE76	937 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	EEF2KMT	Q96G04	330 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	CEP63	Q96MT8	703 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	TSG101	Q99816	390 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	SEL1L	Q9UBV2	794 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	PCDHA10	Q9Y5I2	948 aa		10.48	□□□□□ -0.73
HNRNPC-223	ENST00000556142	ARHGEF35	A5YM69	484 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142		B4DLN1	442 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	PDXK	O00764	312 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	BACH1	O14867	736 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	EIF3D	O15371	548 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	TGFB1I1	O43294	461 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	ZNF862	O60290	1169 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	HIP1R	O75146	1068 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	PPP1R37	O75864	691 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	GABBR2	O75899	941 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	FAM13A	O94988	1023 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	CYP2C8	P10632	490 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	MAPT	P10636	758 aa	Known RBP	10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	CETP	P11597	493 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	NMT1	P30419	496 aa	Known RBP	10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	YWHAB	P31946	246 aa	Known RBP	10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	DNM2	P50570	870 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	GTF2A2	P52657	109 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	ERVK-9	P63128	1117 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	ERVK-24	P63145	666 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	UBXN1	Q04323	297 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	SREBF2	Q12772	1141 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	NFIL3	Q16649	462 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	GNPTAB	Q3T906	1256 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	VWA3B	Q502W6	1294 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	E4F1	Q66K89	784 aa	Predicted RBP	10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	ANKRD23	Q86SG2	305 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	CCDC112	Q8NEF3	446 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	BRI3BP	Q8WY22	251 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	ERGIC2	Q96RQ1	377 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	ZHX3	Q9H4I2	956 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	MROH8	Q9H579	483 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	PARVG	Q9HBI0	331 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	PDLIM7	Q9NR12	457 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	SLC9A2	Q9UBY0	812 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	SAMM50	Q9Y512	469 aa		10.47	□□□□□ -0.73
HNRNPC-223	ENST00000556142	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.47	□□□□□ -0.73	8e-13	■■■□□ 16.8
HNRNPC-223	ENST00000556142	IGKV6D-21	A0A0A0MT36	114 aa		10.46	□□□□□ -0.74
HNRNPC-223	ENST00000556142	TMEM150B	A6NC51	233 aa		10.46	□□□□□ -0.74
HNRNPC-223	ENST00000556142	USP27X	A6NNY8	438 aa		10.46	□□□□□ -0.74
HNRNPC-223	ENST00000556142	PDHX	O00330	501 aa		10.46	□□□□□ -0.74
HNRNPC-223	ENST00000556142	MFAP3L	O75121	409 aa		10.46	□□□□□ -0.74
HNRNPC-223	ENST00000556142	TBCA	O75347	108 aa	Known RBP	10.46	□□□□□ -0.74
HNRNPC-223	ENST00000556142	ATP4A	P20648	1035 aa		10.46	□□□□□ -0.74
HNRNPC-223	ENST00000556142	ACTR2	P61160	394 aa		10.46	□□□□□ -0.74
HNRNPC-223	ENST00000556142	KCNA1	Q09470	495 aa		10.46	□□□□□ -0.74
HNRNPC-223	ENST00000556142	MKRN3	Q13064	507 aa	Known RBP	10.46	□□□□□ -0.74
HNRNPC-223	ENST00000556142	MAN2A1	Q16706	1144 aa		10.46	□□□□□ -0.74

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