RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 POP1Q99575 1024 aaKnown RBP18.58■□□□□ 0.57
PPP4R3A-208ENST00000555462 PCIF1Q9H4Z3 704 aa18.58■□□□□ 0.57
PPP4R3A-208ENST00000555462 DDX39AO00148 427 aaKnown RBP18.58■□□□□ 0.56
PPP4R3A-208ENST00000555462 DDX3XO00571 662 aaKnown RBP eCLIP18.58■□□□□ 0.561e-6■■□□□ 13.1
PPP4R3A-208ENST00000555462 H2AFZP0C0S5 128 aa18.58■□□□□ 0.56
PPP4R3A-208ENST00000555462 HIBCHQ6NVY1 386 aaPredicted RBP18.58■□□□□ 0.56
PPP4R3A-208ENST00000555462 H2AFVQ71UI9 128 aa18.58■□□□□ 0.56
PPP4R3A-208ENST00000555462 CCDC91Q7Z6B0 441 aa18.58■□□□□ 0.56
PPP4R3A-208ENST00000555462 ELAC2Q9BQ52 826 aaKnown RBP18.58■□□□□ 0.56
PPP4R3A-208ENST00000555462 RIC8AQ9NPQ8 531 aa18.58■□□□□ 0.56
PPP4R3A-208ENST00000555462 PCDHGC5Q9Y5F6 944 aa18.58■□□□□ 0.56
PPP4R3A-208ENST00000555462 TBC1D1Q86TI0 1168 aaPredicted RBP18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 TPH2Q8IWU9 490 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 MAGEF1Q9HAY2 307 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 UPP2O95045 317 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 FXR2P51116 673 aaKnown RBP eCLIP18.57■□□□□ 0.567e-14■■■□□ 16.1
PPP4R3A-208ENST00000555462 RBM5P52756 815 aaKnown RBP eCLIP18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 NFIAQ12857 509 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 C16orf86Q6ZW13 317 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 CNPY4Q8N129 248 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 GIMAP7Q8NHV1 300 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 WHAMMQ8TF30 809 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 CUL5Q93034 780 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 C18orf8Q96DM3 657 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 ISCUQ9H1K1 167 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 PLCG2P16885 1265 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 HOXD13P35453 343 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 USP11P51784 963 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 ZKSCAN8Q15776 578 aaPredicted RBP18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 SEPT14Q6ZU15 432 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 ZNF804AQ7Z570 1209 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 SLC35G2Q8TBE7 412 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 TACO1Q9BSH4 297 aaKnown RBP18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 RUSC1Q9BVN2 902 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 AZI2Q9H6S1 392 aa18.57■□□□□ 0.56
PPP4R3A-208ENST00000555462 HMGB1P1B2RPK0 211 aaPredicted RBP18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 CLSTN1O94985 981 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 GDF11O95390 407 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 NSMFQ6X4W1 530 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 MICALCLQ6ZW33 695 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 N4BP2L2Q92802 583 aaPredicted RBP18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 MRRFQ96E11 262 aaKnown RBP18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 KCTD10Q9H3F6 313 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 L3MBTL1Q9Y468 752 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 SHANK3Q9BYB0 1731 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 EVI5O60447 810 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 AFPP02771 609 aaKnown RBP18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 ZNF76P36508 570 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 PPP2R2AP63151 447 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 SNX1Q13596 522 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 TNIP1Q15025 636 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 C2CD6Q53TS8 623 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 FAM182AQ5T1J6 154 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 CACNA2D3Q8IZS8 1091 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 FBXO25Q8TCJ0 367 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.56■□□□□ 0.568e-7■■□□□ 12.7
PPP4R3A-208ENST00000555462 ZBTB21Q9ULJ3 1066 aa18.56■□□□□ 0.56
PPP4R3A-208ENST00000555462 LDHCP07864 332 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 GLE1Q53GS7 698 aaKnown RBP18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 KIF2BQ8N4N8 673 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 ANKRD42Q8N9B4 389 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 EPS8L3Q8TE67 593 aaKnown RBP18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 RPGRQ92834 1020 aaKnown RBP18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 THAP2Q9H0W7 228 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 UTP11Q9Y3A2 253 aaKnown RBP18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 MYH1P12882 1939 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 MYH4Q9Y623 1939 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 UBAP1LF5GYI3 381 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 CREB1P16220 341 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 HSPA9P38646 679 aaKnown RBP18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 QRICH1Q2TAL8 776 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 MYCT1Q8N699 235 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 PWWP2AQ96N64 755 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 DHX36Q9H2U1 1008 aaKnown RBP18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 KCNQ5Q9NR82 932 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 H0YGN5 161 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 CHN1P15882 459 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 RHBDL3P58872 404 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 TMEM119Q4V9L6 283 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 SUGP1Q8IWZ8 645 aaKnown RBP18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 KRT35Q92764 455 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 SEMA4AQ9H3S1 761 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 ZNF287Q9HBT7 754 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 TSKSQ9UJT2 592 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 NFS1Q9Y697 457 aa18.55■□□□□ 0.56
PPP4R3A-208ENST00000555462 CASZ1Q86V15 1759 aa18.54■□□□□ 0.56
PPP4R3A-208ENST00000555462 TCRBV7S2A1N4TA0A589 114 aa18.54■□□□□ 0.56
PPP4R3A-208ENST00000555462 ITIH3Q06033 890 aa18.54■□□□□ 0.56
PPP4R3A-208ENST00000555462 SLC29A2Q14542 456 aa18.54■□□□□ 0.56
PPP4R3A-208ENST00000555462 ZYXQ15942 572 aaKnown RBP18.54■□□□□ 0.56
PPP4R3A-208ENST00000555462 DAB2IPQ5VWQ8 1189 aa18.54■□□□□ 0.56
PPP4R3A-208ENST00000555462 ZNF572Q7Z3I7 529 aaPredicted RBP18.54■□□□□ 0.56
PPP4R3A-208ENST00000555462 SLC20A1Q8WUM9 679 aa18.54■□□□□ 0.56
PPP4R3A-208ENST00000555462 PRMT1Q99873 361 aaKnown RBP18.54■□□□□ 0.56
PPP4R3A-208ENST00000555462 LZTS2Q9BRK4 669 aa18.54■□□□□ 0.56
PPP4R3A-208ENST00000555462 RIOX1Q9H6W3 641 aa18.54■□□□□ 0.56
PPP4R3A-208ENST00000555462 TBK1Q9UHD2 729 aa18.54■□□□□ 0.56
PPP4R3A-208ENST00000555462 A0A1B0GUL6 1792 aa18.54■□□□□ 0.56
PPP4R3A-208ENST00000555462 NR3C1P04150 777 aa18.54■□□□□ 0.56
PPP4R3A-208ENST00000555462 SSTR3P32745 418 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms