RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 LCA5Q86VQ0 697 aa7.31□□□□□ -1.24
VPS29-210ENST00000552130 MFSD4AQ8N468 514 aa7.31□□□□□ -1.24
VPS29-210ENST00000552130 OTUD6BQ8N6M0 293 aa7.31□□□□□ -1.24
VPS29-210ENST00000552130 AHCYL2Q96HN2 611 aaKnown RBP7.31□□□□□ -1.24
VPS29-210ENST00000552130 DIRC2Q96SL1 478 aa7.31□□□□□ -1.24
VPS29-210ENST00000552130 TBCBQ99426 244 aa7.31□□□□□ -1.24
VPS29-210ENST00000552130 RNF38Q9H0F5 515 aa7.31□□□□□ -1.24
VPS29-210ENST00000552130 VTA1Q9NP79 307 aa7.31□□□□□ -1.24
VPS29-210ENST00000552130 PICK1Q9NRD5 415 aa7.31□□□□□ -1.24
VPS29-210ENST00000552130 ZNF652Q9Y2D9 606 aa7.31□□□□□ -1.24
VPS29-210ENST00000552130 SNX5Q9Y5X3 404 aa7.31□□□□□ -1.24
VPS29-210ENST00000552130 MRFAP1Q9Y605 127 aa7.31□□□□□ -1.24
VPS29-210ENST00000552130 SYNDIG1LA6NDD5 238 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 PRODHO43272 600 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 MAFKO60675 156 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 TIPRLO75663 272 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 HRGP04196 525 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 C6orf222P0C671 652 aaPredicted RBP7.3□□□□□ -1.24
VPS29-210ENST00000552130 MYBP10242 640 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 ACRP10323 421 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 GALNSP34059 522 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 IL6STP40189 918 aaPredicted RBP7.3□□□□□ -1.24
VPS29-210ENST00000552130 ADCYAP1R1P41586 468 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 ZNF131P52739 623 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 SNX16P57768 344 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 PPP2R2AP63151 447 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 TNFAIP2Q03169 654 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 IFIT5Q13325 482 aaKnown RBP7.3□□□□□ -1.24
VPS29-210ENST00000552130 KCNA10Q16322 511 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 SFRP5Q5T4F7 317 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 ITPRIPL1Q6GPH6 555 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 NSMFQ6X4W1 530 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 UBE2Q1Q7Z7E8 422 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 C7orf61Q8IZ16 206 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 ZNF507Q8TCN5 953 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 CCDC120Q96HB5 630 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 UBXN10Q96LJ8 280 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 ZMAT2Q96NC0 199 aaKnown RBP7.3□□□□□ -1.24
VPS29-210ENST00000552130 FAM193BQ96PV7 902 aaPredicted RBP7.3□□□□□ -1.24
VPS29-210ENST00000552130 ALPK1Q96QP1 1244 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 BARD1Q99728 777 aaKnown RBP7.3□□□□□ -1.24
VPS29-210ENST00000552130 XPO4Q9C0E2 1151 aaKnown RBP7.3□□□□□ -1.24
VPS29-210ENST00000552130 CHMP4BQ9H444 224 aaKnown RBP7.3□□□□□ -1.24
VPS29-210ENST00000552130 KCNK12Q9HB15 430 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 TOPORSQ9NS56 1045 aaPredicted RBP7.3□□□□□ -1.24
VPS29-210ENST00000552130 MRGBPQ9NV56 204 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 MKS1Q9NXB0 559 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 NKIRAS2Q9NYR9 191 aa7.3□□□□□ -1.24
VPS29-210ENST00000552130 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.29□□□□□ -1.24
VPS29-210ENST00000552130 ANKRD18BA2A2Z9 1011 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 AREL1O15033 823 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 OFD1O75665 1012 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 ARIH2O95376 493 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 TMEM253P0C7T8 217 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 CTNNA1P35221 906 aaKnown RBP7.29□□□□□ -1.24
VPS29-210ENST00000552130 TDO2P48775 406 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 MMP14P50281 582 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 GABREP78334 506 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 HTRA3P83110 453 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 RPL6Q02878 288 aaKnown RBP7.29□□□□□ -1.24
VPS29-210ENST00000552130 ZNF267Q14586 743 aaPredicted RBP7.29□□□□□ -1.24
VPS29-210ENST00000552130 LRRC14Q15048 493 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 GNPTABQ3T906 1256 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 DNAJC21Q5F1R6 531 aaKnown RBP7.29□□□□□ -1.24
VPS29-210ENST00000552130 SLC10A5Q5PT55 438 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 GPATCH4Q5T3I0 446 aaKnown RBP7.29□□□□□ -1.24
VPS29-210ENST00000552130 PIK3R6Q5UE93 754 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 HIBCHQ6NVY1 386 aaPredicted RBP7.29□□□□□ -1.24
VPS29-210ENST00000552130 LLGL2Q6P1M3 1020 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 CCDC149Q6ZUS6 474 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 FAM156AQ8NDB6 213 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 APPL2Q8NEU8 664 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 BTN2A2Q8WVV5 523 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 OSBP2Q969R2 916 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 SCLYQ96I15 445 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 RSRC1Q96IZ7 334 aaKnown RBP7.29□□□□□ -1.24
VPS29-210ENST00000552130 VPS11Q9H270 941 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 PLEKHA5Q9HAU0 1116 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 PCDHGB6Q9Y5F9 930 aa7.29□□□□□ -1.24
VPS29-210ENST00000552130 ZNF891A8MT65 544 aaPredicted RBP7.28□□□□□ -1.24
VPS29-210ENST00000552130 H3BS24 57 aa7.28□□□□□ -1.24
VPS29-210ENST00000552130 XPOTO43592 962 aaKnown RBP7.28□□□□□ -1.24
VPS29-210ENST00000552130 FKBP9O95302 570 aa7.28□□□□□ -1.24
VPS29-210ENST00000552130 INHBBP09529 407 aa7.28□□□□□ -1.24
VPS29-210ENST00000552130 NAT2P11245 290 aa7.28□□□□□ -1.24
VPS29-210ENST00000552130 SRFP11831 508 aa7.28□□□□□ -1.24
VPS29-210ENST00000552130 RAC2P15153 192 aa7.28□□□□□ -1.24
VPS29-210ENST00000552130 ZNF143P52747 638 aaPredicted RBP7.28□□□□□ -1.24
VPS29-210ENST00000552130 PSMC1P62191 440 aaKnown RBP7.28□□□□□ -1.24
VPS29-210ENST00000552130 LLGL1Q15334 1064 aa7.28□□□□□ -1.24
VPS29-210ENST00000552130 CDKAL1Q5VV42 579 aa7.28□□□□□ -1.24
VPS29-210ENST00000552130 INTS3Q68E01 1043 aaKnown RBP7.28□□□□□ -1.24
VPS29-210ENST00000552130 SLC6A19Q695T7 634 aa7.28□□□□□ -1.24
VPS29-210ENST00000552130 ATG14Q6ZNE5 492 aa7.28□□□□□ -1.24
VPS29-210ENST00000552130 FKBP9P1Q75LS8 142 aa7.28□□□□□ -1.24
VPS29-210ENST00000552130 C11orf74Q86VG3 221 aa7.28□□□□□ -1.24
VPS29-210ENST00000552130 ARL10Q8N8L6 244 aa7.28□□□□□ -1.24
VPS29-210ENST00000552130 ZBTB34Q8NCN2 500 aa7.28□□□□□ -1.24
VPS29-210ENST00000552130 TBC1D31Q96DN5 1066 aa7.28□□□□□ -1.24
VPS29-210ENST00000552130 WNK4Q96J92 1243 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms