RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 BRF1Q92994 677 aa13.15□□□□□ -0.3
PRPF40B-212ENST00000551111 PHKBQ93100 1093 aa13.15□□□□□ -0.3
PRPF40B-212ENST00000551111 SNX14Q9Y5W7 946 aa13.15□□□□□ -0.3
PRPF40B-212ENST00000551111 SQORQ9Y6N5 450 aa13.15□□□□□ -0.3
PRPF40B-212ENST00000551111 KDM3AQ9Y4C1 1321 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 IPO5O00410 1097 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 BACH1O14867 736 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 CDC45O75419 566 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 MMP1P03956 469 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 CYP3A4P08684 503 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 RBM10P98175 930 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 AP3B2Q13367 1082 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 NTRK3Q16288 839 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 PDXDC2PQ6P474 469 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 CENPQQ7L2Z9 268 aaPredicted RBP13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 NIPA1Q7RTP0 329 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 NPAS4Q8IUM7 802 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 CMTR2Q8IYT2 770 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 ATP8B4Q8TF62 1192 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 GJA10Q969M2 543 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 FAM122AQ96E09 287 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 JAKMIP1Q96N16 626 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 ZMYND12Q9H0C1 365 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 LMAN2LQ9H0V9 348 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 ZNF302Q9NR11 478 aa13.14□□□□□ -0.31
PRPF40B-212ENST00000551111 M0QZ92 97 aa13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 MBTPS2O43462 519 aa13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 HBP1O60381 514 aa13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 C22orf31O95567 290 aa13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 VTNP04004 478 aa13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 METAP2P50579 478 aaKnown RBP eCLIP13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 ADAM15Q13444 863 aa13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 KIZQ2M2Z5 673 aa13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 FAM228AQ86W67 206 aa13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 NME8Q8N427 588 aa13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 LENG9Q96B70 501 aa13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 ZNF668Q96K58 619 aaPredicted RBP13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 OSMRQ99650 979 aa13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 ADAM2Q99965 735 aa13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 FTHL17Q9BXU8 183 aa13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 NCOA5Q9HCD5 579 aaKnown RBP13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 CLEC1BQ9P126 229 aa13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 ST3GAL5Q9UNP4 418 aa13.13□□□□□ -0.31
PRPF40B-212ENST00000551111 ESYT2A0FGR8 921 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 C9IYK1 514 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 hCG_1984214I3L0E3 225 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 PRPF3O43395 683 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 ZNF862O60290 1169 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 GPR32O75388 356 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 RPS6KA5O75582 802 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 GLP2RO95838 553 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 SARSP49591 514 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 SMAD2Q15796 467 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 PUS10Q3MIT2 529 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 PRR16Q569H4 304 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 FAM160B1Q5W0V3 765 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 RBM23Q86U06 439 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 ZNF713Q8N859 430 aaPredicted RBP13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 POF1BQ8WVV4 589 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 P2RX5Q93086 422 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 MSLNLQ96KJ4 702 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 ZNF577Q9BSK1 485 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 PLVAPQ9BX97 442 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 GABBR1Q9UBS5 961 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 RWDD3Q9Y3V2 267 aa13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 MAFBQ9Y5Q3 323 aaPredicted RBP13.12□□□□□ -0.31
PRPF40B-212ENST00000551111 NID2Q14112 1375 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 PER2O15055 1255 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 DTNBO60941 627 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 FGFR1P11362 822 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 HSPA4P34932 840 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 SLC26A2P50443 739 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 CLCN3P51790 818 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 CCT2P78371 535 aaKnown RBP13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 FGD1P98174 961 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 KRT32Q14532 448 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 DSC3Q14574 896 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 UGCGQ16739 394 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 ZNF484Q5JVG2 852 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 MIS18BP1Q6P0N0 1132 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 ADHFE1Q8IWW8 467 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 CKAP2LQ8IYA6 745 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 LRRC71Q8N4P6 559 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 METTL13Q8N6R0 699 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 VN1R2Q8NFZ6 395 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 AGXT2Q9BYV1 514 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 RGS18Q9NS28 235 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 RNF19AQ9NV58 838 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 VPS54Q9P1Q0 977 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 LRFN2Q9ULH4 789 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 PCDHB7Q9Y5E2 793 aa13.11□□□□□ -0.31
PRPF40B-212ENST00000551111 COL1A2P08123 1366 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 TBKBP1A7MCY6 615 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 RPLP2P05387 115 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 STAG3L1P0CL83 205 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 RPS6KB1P23443 525 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 NRIP1P48552 1158 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 RCAN1P53805 252 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms