RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 MMTAG2Q9BU76 263 aaKnown RBP23.96■■□□□ 1.43
NEK3-202ENST00000550841 TRMT13Q9NUP7 481 aaKnown RBP23.96■■□□□ 1.43
NEK3-202ENST00000550841 WRAP73Q9P2S5 460 aaPredicted RBP23.96■■□□□ 1.43
NEK3-202ENST00000550841 CCDC39Q9UFE4 941 aa23.96■■□□□ 1.43
NEK3-202ENST00000550841 PRKAG2Q9UGJ0 569 aa23.96■■□□□ 1.43
NEK3-202ENST00000550841 KIAA1024Q9UPX6 916 aa23.96■■□□□ 1.43
NEK3-202ENST00000550841 DNM3Q9UQ16 869 aa23.96■■□□□ 1.43
NEK3-202ENST00000550841 MBLAC1A4D2B0 266 aaPredicted RBP23.95■■□□□ 1.42
NEK3-202ENST00000550841 KLRC1P26715 233 aa23.95■■□□□ 1.42
NEK3-202ENST00000550841 FAAP100Q0VG06 881 aa23.95■■□□□ 1.42
NEK3-202ENST00000550841 CSPP1Q1MSJ5 1256 aa23.95■■□□□ 1.42
NEK3-202ENST00000550841 TAF2Q6P1X5 1199 aa23.95■■□□□ 1.42
NEK3-202ENST00000550841 CCDC155Q8N6L0 562 aa23.95■■□□□ 1.42
NEK3-202ENST00000550841 RASSF8Q8NHQ8 419 aa23.95■■□□□ 1.42
NEK3-202ENST00000550841 CEP170P1Q96L14 293 aa23.95■■□□□ 1.42
NEK3-202ENST00000550841 JPH2Q9BR39 696 aaPredicted RBP23.95■■□□□ 1.42
NEK3-202ENST00000550841 CYP26B1Q9NR63 512 aa23.95■■□□□ 1.42
NEK3-202ENST00000550841 TMEM39AQ9NV64 488 aa23.95■■□□□ 1.42
NEK3-202ENST00000550841 TUBE1Q9UJT0 475 aa23.95■■□□□ 1.42
NEK3-202ENST00000550841 DBR1Q9UK59 544 aaKnown RBP23.95■■□□□ 1.42
NEK3-202ENST00000550841 PCDHA7Q9UN72 937 aa23.95■■□□□ 1.42
NEK3-202ENST00000550841 PCDHA2Q9Y5H9 948 aa23.95■■□□□ 1.42
NEK3-202ENST00000550841 TCHHQ07283 1943 aa23.94■■□□□ 1.42
NEK3-202ENST00000550841 TREHO43280 583 aa23.94■■□□□ 1.42
NEK3-202ENST00000550841 ZNF200P98182 395 aaPredicted RBP23.94■■□□□ 1.42
NEK3-202ENST00000550841 TARBP2Q15633 366 aaKnown RBP23.94■■□□□ 1.42
NEK3-202ENST00000550841 ZRSR1Q15695 479 aaKnown RBP23.94■■□□□ 1.42
NEK3-202ENST00000550841 MTERF2Q49AM1 385 aa23.94■■□□□ 1.42
NEK3-202ENST00000550841 XKR9Q5GH70 373 aa23.94■■□□□ 1.42
NEK3-202ENST00000550841 MTHFD1LQ6UB35 978 aa23.94■■□□□ 1.42
NEK3-202ENST00000550841 RETREG2Q8NC44 543 aa23.94■■□□□ 1.42
NEK3-202ENST00000550841 PRO3102Q9H379 93 aa23.94■■□□□ 1.42
NEK3-202ENST00000550841 DDX19AQ9NUU7 478 aaKnown RBP23.94■■□□□ 1.42
NEK3-202ENST00000550841 ZBTB42B2RXF5 422 aa23.93■■□□□ 1.42
NEK3-202ENST00000550841 TMOD1P28289 359 aa23.93■■□□□ 1.42
NEK3-202ENST00000550841 TBC1D8BQ0IIM8 1120 aa23.93■■□□□ 1.42
NEK3-202ENST00000550841 BFSP2Q13515 415 aa23.93■■□□□ 1.42
NEK3-202ENST00000550841 HIC1Q14526 733 aa23.93■■□□□ 1.42
NEK3-202ENST00000550841 MARCH8Q5T0T0 291 aa23.93■■□□□ 1.42
NEK3-202ENST00000550841 POTEGQ6S5H5 508 aa23.93■■□□□ 1.42
NEK3-202ENST00000550841 RSPH3Q86UC2 560 aa23.93■■□□□ 1.42
NEK3-202ENST00000550841 SERINC5Q86VE9 423 aa23.93■■□□□ 1.42
NEK3-202ENST00000550841 PIGOQ8TEQ8 1089 aa23.93■■□□□ 1.42
NEK3-202ENST00000550841 SYMPKQ92797 1274 aaKnown RBP23.93■■□□□ 1.42
NEK3-202ENST00000550841 EPSTI1Q96J88 318 aa23.93■■□□□ 1.42
NEK3-202ENST00000550841 FAM13BQ9NYF5 915 aa23.93■■□□□ 1.42
NEK3-202ENST00000550841 CYP2C9P11712 490 aa23.92■■□□□ 1.42
NEK3-202ENST00000550841 RFC5P40937 340 aa23.92■■□□□ 1.42
NEK3-202ENST00000550841 ECM1Q16610 540 aa23.92■■□□□ 1.42
NEK3-202ENST00000550841 SPECC1Q5M775 1068 aa23.92■■□□□ 1.42
NEK3-202ENST00000550841 AXDND1Q5T1B0 1012 aaPredicted RBP23.92■■□□□ 1.42
NEK3-202ENST00000550841 ADALQ6DHV7 355 aa23.92■■□□□ 1.42
NEK3-202ENST00000550841 C7orf61Q8IZ16 206 aa23.92■■□□□ 1.42
NEK3-202ENST00000550841 NME8Q8N427 588 aa23.92■■□□□ 1.42
NEK3-202ENST00000550841 CAGE1Q8TC20 777 aa23.92■■□□□ 1.42
NEK3-202ENST00000550841 TRAPPC12Q8WVT3 735 aa23.92■■□□□ 1.42
NEK3-202ENST00000550841 CHAMP1Q96JM3 812 aa23.92■■□□□ 1.42
NEK3-202ENST00000550841 TRIP12Q14669 1992 aaPredicted RBP23.92■■□□□ 1.42
NEK3-202ENST00000550841 SMIM35A0A1B0GVV1 85 aa23.91■■□□□ 1.42
NEK3-202ENST00000550841 A0A1W2PPC1 479 aa23.91■■□□□ 1.42
NEK3-202ENST00000550841 ZBTB39O15060 712 aa23.91■■□□□ 1.42
NEK3-202ENST00000550841 EYA4O95677 639 aa23.91■■□□□ 1.42
NEK3-202ENST00000550841 RARRES1P49788 294 aa23.91■■□□□ 1.42
NEK3-202ENST00000550841 DNM2P50570 870 aa23.91■■□□□ 1.42
NEK3-202ENST00000550841 NPEPPSP55786 919 aa23.91■■□□□ 1.42
NEK3-202ENST00000550841 GRB10Q13322 594 aa23.91■■□□□ 1.42
NEK3-202ENST00000550841 PLA2G4FQ68DD2 849 aa23.91■■□□□ 1.42
NEK3-202ENST00000550841 SLC7A3Q8WY07 619 aa23.91■■□□□ 1.42
NEK3-202ENST00000550841 PNMA5Q96PV4 448 aa23.91■■□□□ 1.42
NEK3-202ENST00000550841 ARHGEF35A5YM69 484 aa23.9■■□□□ 1.42
NEK3-202ENST00000550841 KIAA0355O15063 1070 aa23.9■■□□□ 1.42
NEK3-202ENST00000550841 GAS2O43903 313 aaKnown RBP23.9■■□□□ 1.42
NEK3-202ENST00000550841 CAND2O75155 1236 aa23.9■■□□□ 1.42
NEK3-202ENST00000550841 C22orf31O95567 290 aa23.9■■□□□ 1.42
NEK3-202ENST00000550841 TMEM119Q4V9L6 283 aa23.9■■□□□ 1.42
NEK3-202ENST00000550841 RRAGBQ5VZM2 374 aa23.9■■□□□ 1.42
NEK3-202ENST00000550841 EFCAB12Q6NXP0 572 aa23.9■■□□□ 1.42
NEK3-202ENST00000550841 CCDC73Q6ZRK6 1079 aa23.9■■□□□ 1.42
NEK3-202ENST00000550841 RPAINQ86UA6 219 aa23.9■■□□□ 1.42
NEK3-202ENST00000550841 ZNF710Q8N1W2 664 aa23.9■■□□□ 1.42
NEK3-202ENST00000550841 CTAGE1Q96RT6 745 aa23.9■■□□□ 1.42
NEK3-202ENST00000550841 CEP89Q96ST8 783 aa23.9■■□□□ 1.42
NEK3-202ENST00000550841 PRDM5Q9NQX1 630 aaPredicted RBP23.9■■□□□ 1.42
NEK3-202ENST00000550841 PDLIM7Q9NR12 457 aa23.9■■□□□ 1.42
NEK3-202ENST00000550841 TBX21Q9UL17 535 aa23.9■■□□□ 1.42
NEK3-202ENST00000550841 TMEM150BA6NC51 233 aa23.89■■□□□ 1.41
NEK3-202ENST00000550841 GOLGA6L4A6NEF3 574 aa23.89■■□□□ 1.41
NEK3-202ENST00000550841 MAFO75444 373 aaPredicted RBP23.89■■□□□ 1.41
NEK3-202ENST00000550841 DGAT1O75907 488 aa23.89■■□□□ 1.41
NEK3-202ENST00000550841 POLGP54098 1239 aaPredicted RBP23.89■■□□□ 1.41
NEK3-202ENST00000550841 KARSQ15046 597 aaKnown RBP23.89■■□□□ 1.41
NEK3-202ENST00000550841 USP49Q70CQ1 688 aa23.89■■□□□ 1.41
NEK3-202ENST00000550841 METTL13Q8N6R0 699 aa23.89■■□□□ 1.41
NEK3-202ENST00000550841 PLIN2Q99541 437 aa23.89■■□□□ 1.41
NEK3-202ENST00000550841 PYM1Q9BRP8 204 aaKnown RBP23.89■■□□□ 1.41
NEK3-202ENST00000550841 HIPK3Q9H422 1215 aa23.89■■□□□ 1.41
NEK3-202ENST00000550841 SUGCTQ9HAC7 445 aa23.89■■□□□ 1.41
NEK3-202ENST00000550841 A0A087WWV3 80 aa23.88■■□□□ 1.41
NEK3-202ENST00000550841 PITPNM1O00562 1244 aa23.88■■□□□ 1.41
NEK3-202ENST00000550841 RAG1P15918 1043 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms