RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 GABBR1Q9UBS5 961 aa11□□□□□ -0.65
TNFRSF1A-214ENST00000543048 SAMM50Q9Y512 469 aa11□□□□□ -0.65
TNFRSF1A-214ENST00000543048 TTC3P53804 2025 aa11□□□□□ -0.65
TNFRSF1A-214ENST00000543048 SMIM35A0A1B0GVV1 85 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 TLL1O43897 1013 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 TDP2O95551 362 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 SFNP31947 248 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 RBM25P49756 843 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 MRPS6P82932 125 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 MGAT3Q09327 533 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 LETM2Q2VYF4 491 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 LRCH2Q5VUJ6 765 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 PPP4R3AQ6IN85 833 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 CKAP2LQ8IYA6 745 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 OXER1Q8TDS5 423 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 TRAPPC12Q8WVT3 735 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 APBB2Q92870 758 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 KIF2CQ99661 725 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 NAP1L4Q99733 375 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 OSBPL7Q9BZF2 842 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 BRMS1Q9HCU9 246 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 NRBP2Q9NSY0 501 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 DDX25Q9UHL0 483 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 COL1A2P08123 1366 aa10.99□□□□□ -0.65
TNFRSF1A-214ENST00000543048 PSMD10O75832 226 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 AMHP03971 560 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 FOSL2P15408 326 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 GCFC2P16383 781 aaKnown RBP10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 KRT2P35908 639 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 JAK3P52333 1124 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 DEFB103AP81534 67 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 TRIM29Q14134 588 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 LCE2DQ5TA82 110 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 PPP2R2DQ66LE6 453 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 PIK3AP1Q6ZUJ8 805 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 NEK8Q86SG6 692 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 SLC17A8Q8NDX2 589 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 RDM1Q8NG50 284 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 GJA10Q969M2 543 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 ZBTB10Q96DT7 871 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 FAM167AQ96KS9 214 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 FAM20AQ96MK3 541 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 GAS2L1Q99501 681 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 RAD9AQ99638 391 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 LLPHQ9BRT6 129 aaKnown RBP10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 FAM49AQ9H0Q0 323 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 UNC45AQ9H3U1 944 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 PRDM12Q9H4Q4 367 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 CHD7Q9P2D1 2997 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 CDY2AQ9Y6F7 541 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 SQORQ9Y6N5 450 aa10.98□□□□□ -0.65
TNFRSF1A-214ENST00000543048 ZBTB42B2RXF5 422 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 M0QZ92 97 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 MAGEB2O15479 319 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 CHMP2AO43633 222 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 ST18O60284 1047 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 MARCH6O60337 910 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 CCNT1O60563 726 aaKnown RBP10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 JAK2O60674 1132 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 GJB5O95377 273 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 MMP1P03956 469 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 CA3P07451 260 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 LPIN1Q14693 890 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 FBXO47Q5MNV8 452 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 KRT40Q6A162 431 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 TRMT1LQ7Z2T5 733 aaKnown RBP10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 MIER3Q7Z3K6 550 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 TMCO2Q7Z6W1 182 aaPredicted RBP10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 CCDC83Q8IWF9 413 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 KIAA0319LQ8IZA0 1049 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 USP38Q8NB14 1042 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 IL27Q8NEV9 243 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 ETNPPLQ8TBG4 499 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 IFIH1Q9BYX4 1025 aaKnown RBP10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 CELF4Q9BZC1 486 aaKnown RBP10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 SH2B1Q9NRF2 756 aaPredicted RBP10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 CEP131Q9UPN4 1083 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 TRPV2Q9Y5S1 764 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 NLRC5Q86WI3 1866 aa10.97□□□□□ -0.65
TNFRSF1A-214ENST00000543048 CDH23Q9H251 3354 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 PRRC2BQ5JSZ5 2229 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 KDM3AQ9Y4C1 1321 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 BTBD18B2RXH4 712 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 ENPP3O14638 875 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 TBX3O15119 743 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 SLC37A4O43826 429 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 BAG4O95429 457 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 GHRP10912 638 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 TAP1Q03518 808 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 TMEM62Q0P6H9 643 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 ST3GAL1Q11201 340 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 NR5A1Q13285 461 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 RABEP1Q15276 862 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 SAFBQ15424 915 aaKnown RBP eCLIP10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 EARS2Q5JPH6 523 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 FAM117BQ6P1L5 589 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 B3GNT9Q6UX72 402 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 TSHZ1Q6ZSZ6 1077 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 FAM43BQ6ZT52 329 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms