RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 TSEN2Q8NCE0 465 aaKnown RBP11.85□□□□□ -0.51
ERBB2-204ENST00000541774 MAML1Q92585 1016 aa11.85□□□□□ -0.51
ERBB2-204ENST00000541774 ABHD8Q96I13 439 aa11.85□□□□□ -0.51
ERBB2-204ENST00000541774 ARMCX3Q9UH62 379 aaPredicted RBP11.85□□□□□ -0.51
ERBB2-204ENST00000541774 HAO1Q9UJM8 370 aa11.85□□□□□ -0.51
ERBB2-204ENST00000541774 GRID2IPA4D2P6 1211 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 TRAPPC3O43617 180 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 CCDC22O60826 627 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 RASSF9O75901 435 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 KCNJ2P63252 427 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 MRPS15P82914 257 aaKnown RBP11.84□□□□□ -0.51
ERBB2-204ENST00000541774 LMNB2Q03252 620 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 OCA2Q04671 838 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 MPP3Q13368 585 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 EPM2AIP1Q7L775 607 aaPredicted RBP11.84□□□□□ -0.51
ERBB2-204ENST00000541774 NELFCDQ8IXH7 590 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 PPWD1Q96BP3 646 aaKnown RBP11.84□□□□□ -0.51
ERBB2-204ENST00000541774 OLFML3Q9NRN5 406 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 TFCP2L1Q9NZI6 479 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 TMCO1Q9UM00 188 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 LRRC7Q96NW7 1537 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 DEPDC5O75140 1603 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 RIMS1Q86UR5 1692 aaKnown RBP11.84□□□□□ -0.51
ERBB2-204ENST00000541774 C1orf167Q5SNV9 1468 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 MCF2P10911 925 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 PTGDRQ13258 359 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 XRCC4Q13426 336 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 CTAGE3PQ8IX95 158 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 DDHD1Q8NEL9 900 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 MKNK2Q9HBH9 465 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 USP40Q9NVE5 1235 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 SH3GLB1Q9Y371 365 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 ARIH1Q9Y4X5 557 aaPredicted RBP11.84□□□□□ -0.51
ERBB2-204ENST00000541774 PTCH1Q13635 1447 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 P4HA2O15460 535 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 RAD51CO43502 376 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 HARSP12081 509 aaKnown RBP11.84□□□□□ -0.51
ERBB2-204ENST00000541774 ITGA6P23229 1130 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 ZNF76P36508 570 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 STAT1P42224 750 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 TMEM110Q86TL2 294 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 SESTD1Q86VW0 696 aa11.84□□□□□ -0.51
ERBB2-204ENST00000541774 DDX28Q9NUL7 540 aaKnown RBP11.84□□□□□ -0.51
ERBB2-204ENST00000541774 DBR1Q9UK59 544 aaKnown RBP11.84□□□□□ -0.51
ERBB2-204ENST00000541774 EXOC1LA0A1B0GW35 172 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 RBM47A0AV96 593 aaKnown RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 KCNQ2O43526 872 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 PRPF6O94906 941 aaKnown RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 EPB41P11171 864 aaKnown RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 GFPT1Q06210 699 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 SPICE1Q8N0Z3 855 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 AENQ8WTP8 325 aaKnown RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 STK32AQ8WU08 396 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 FAM129AQ9BZQ8 928 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 ASCC2Q9H1I8 757 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 GDAQ9Y2T3 454 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 RTCBQ9Y3I0 505 aaKnown RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 F8W031 263 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 SHOX2O60902 331 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 IL15P40933 162 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 MCL1Q07820 350 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 LETM2Q2VYF4 491 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 LRRC24Q50LG9 513 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 PAPD7Q5XG87 772 aaKnown RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 CRACR2BQ8N4Y2 399 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 NLRP3Q96P20 1036 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 PUS3Q9BZE2 481 aaKnown RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 IL1RAPL1Q9NZN1 696 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 ZNF180Q9UJW8 692 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 ATXN2Q99700 1313 aaKnown RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 IQGAP1P46940 1657 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 ZBBXA8MT70 800 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 IFNB1P01574 187 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 ETS2P15036 469 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 LMNB1P20700 586 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 EEF1B2P24534 225 aaKnown RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 ERVK-24P63145 666 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 DCTN2Q13561 401 aaKnown RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 CAVIN4Q5BKX8 364 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 TRIM67Q6ZTA4 783 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 PDZD8Q8NEN9 1154 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 CAVIN3Q969G5 261 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 IL25Q9H293 177 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 GPHNQ9NQX3 736 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-204ENST00000541774 MRGBPQ9NV56 204 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 TXNDC16Q9P2K2 825 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 ZBTB21Q9ULJ3 1066 aa11.83□□□□□ -0.52
ERBB2-204ENST00000541774 GPAA1O43292 621 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 HOXB7P09629 217 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 PEX5P50542 639 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 NEK2P51955 445 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 PPIDQ08752 370 aaKnown RBP11.82□□□□□ -0.52
ERBB2-204ENST00000541774 MIGA1Q8NAN2 632 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 RPGRQ92834 1020 aaKnown RBP11.82□□□□□ -0.52
ERBB2-204ENST00000541774 P2RX5Q93086 422 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 KLHL25Q9H0H3 589 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 RNPEPL1Q9HAU8 725 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 TBC1D7Q9P0N9 293 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 MGEA5O60502 916 aa11.82□□□□□ -0.52
ERBB2-204ENST00000541774 MYL1P05976 194 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 414.5 ms