RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 C22orf31O95567 290 aa21.74■■□□□ 1.07
DDX55-207ENST00000540763 YWHABP31946 246 aaKnown RBP21.74■■□□□ 1.07
DDX55-207ENST00000540763 LONP1P36776 959 aaKnown RBP21.74■■□□□ 1.07
DDX55-207ENST00000540763 IGBP1P78318 339 aa21.74■■□□□ 1.07
DDX55-207ENST00000540763 CTTNQ14247 550 aaKnown RBP21.74■■□□□ 1.07
DDX55-207ENST00000540763 CATSPER3Q86XQ3 398 aa21.74■■□□□ 1.07
DDX55-207ENST00000540763 TPH2Q8IWU9 490 aa21.74■■□□□ 1.07
DDX55-207ENST00000540763 EXOC8Q8IYI6 725 aa21.74■■□□□ 1.07
DDX55-207ENST00000540763 LBHD1Q9BQE6 289 aaPredicted RBP21.74■■□□□ 1.07
DDX55-207ENST00000540763 PPP1R12CQ9BZL4 782 aa21.74■■□□□ 1.07
DDX55-207ENST00000540763 FTOQ9C0B1 505 aaKnown RBP eCLIP21.74■■□□□ 1.07
DDX55-207ENST00000540763 ANKEF1Q9NU02 776 aa21.74■■□□□ 1.07
DDX55-207ENST00000540763 CKBP12277 381 aa21.73■■□□□ 1.07
DDX55-207ENST00000540763 ITGB8P26012 769 aa21.73■■□□□ 1.07
DDX55-207ENST00000540763 KLRC1P26715 233 aa21.73■■□□□ 1.07
DDX55-207ENST00000540763 FOXD4L5Q5VV16 416 aaPredicted RBP21.73■■□□□ 1.07
DDX55-207ENST00000540763 KRT79Q5XKE5 535 aa21.73■■□□□ 1.07
DDX55-207ENST00000540763 RSPH3Q86UC2 560 aa21.73■■□□□ 1.07
DDX55-207ENST00000540763 TMEM199Q8N511 208 aa21.73■■□□□ 1.07
DDX55-207ENST00000540763 RETREG2Q8NC44 543 aa21.73■■□□□ 1.07
DDX55-207ENST00000540763 LINC00301Q8NCQ3 95 aa21.73■■□□□ 1.07
DDX55-207ENST00000540763 TRAPPC12Q8WVT3 735 aa21.73■■□□□ 1.07
DDX55-207ENST00000540763 FOXD4L4Q8WXT5 416 aaPredicted RBP21.73■■□□□ 1.07
DDX55-207ENST00000540763 CEP89Q96ST8 783 aa21.73■■□□□ 1.07
DDX55-207ENST00000540763 JPH2Q9BR39 696 aaPredicted RBP21.73■■□□□ 1.07
DDX55-207ENST00000540763 WNT8AQ9H1J5 351 aa21.73■■□□□ 1.07
DDX55-207ENST00000540763 CFAP45Q9UL16 551 aa21.73■■□□□ 1.07
DDX55-207ENST00000540763 KDM3AQ9Y4C1 1321 aa21.73■■□□□ 1.07
DDX55-207ENST00000540763 DDX11L8A8MPP1 907 aa21.72■■□□□ 1.07
DDX55-207ENST00000540763 MED24O75448 989 aa21.72■■□□□ 1.07
DDX55-207ENST00000540763 SELPP16109 830 aa21.72■■□□□ 1.07
DDX55-207ENST00000540763 RFC2P35250 354 aa21.72■■□□□ 1.07
DDX55-207ENST00000540763 CCT6AP40227 531 aaKnown RBP21.72■■□□□ 1.07
DDX55-207ENST00000540763 TBC1D8BQ0IIM8 1120 aa21.72■■□□□ 1.07
DDX55-207ENST00000540763 HYIQ5T013 277 aa21.72■■□□□ 1.07
DDX55-207ENST00000540763 NME8Q8N427 588 aa21.72■■□□□ 1.07
DDX55-207ENST00000540763 SNX29Q8TEQ0 813 aa21.72■■□□□ 1.07
DDX55-207ENST00000540763 WNT8BQ93098 351 aa21.72■■□□□ 1.07
DDX55-207ENST00000540763 GDF15Q99988 308 aa21.72■■□□□ 1.07
DDX55-207ENST00000540763 CYP26B1Q9NR63 512 aa21.72■■□□□ 1.07
DDX55-207ENST00000540763 CIZ1Q9ULV3 898 aaPredicted RBP21.72■■□□□ 1.07
DDX55-207ENST00000540763 SRPRBQ9Y5M8 271 aaKnown RBP21.72■■□□□ 1.07
DDX55-207ENST00000540763 GAS2O43903 313 aaKnown RBP21.71■■□□□ 1.07
DDX55-207ENST00000540763 PPP6R2O75170 966 aa21.71■■□□□ 1.07
DDX55-207ENST00000540763 CYP2C18P33260 490 aa21.71■■□□□ 1.07
DDX55-207ENST00000540763 BMP8BP34820 402 aa21.71■■□□□ 1.07
DDX55-207ENST00000540763 RFC5P40937 340 aa21.71■■□□□ 1.07
DDX55-207ENST00000540763 PPIGQ13427 754 aaKnown RBP eCLIP21.71■■□□□ 1.074e-6■■□□□ 12.5
DDX55-207ENST00000540763 STK38Q15208 465 aa21.71■■□□□ 1.07
DDX55-207ENST00000540763 MTERF2Q49AM1 385 aa21.71■■□□□ 1.07
DDX55-207ENST00000540763 FAM26DQ5JW98 314 aa21.71■■□□□ 1.07
DDX55-207ENST00000540763 RUFY4Q6ZNE9 571 aa21.71■■□□□ 1.07
DDX55-207ENST00000540763 LRRC8DQ7L1W4 858 aa21.71■■□□□ 1.07
DDX55-207ENST00000540763 TRMT1LQ7Z2T5 733 aaKnown RBP21.71■■□□□ 1.07
DDX55-207ENST00000540763 ZNF710Q8N1W2 664 aa21.71■■□□□ 1.07
DDX55-207ENST00000540763 LINC01465Q8N7H1 131 aa21.71■■□□□ 1.07
DDX55-207ENST00000540763 BADQ92934 168 aa21.71■■□□□ 1.07
DDX55-207ENST00000540763 NACC1Q96RE7 527 aa21.71■■□□□ 1.07
DDX55-207ENST00000540763 FBXO2Q9UK22 296 aaPredicted RBP21.71■■□□□ 1.07
DDX55-207ENST00000540763 DBR1Q9UK59 544 aaKnown RBP21.71■■□□□ 1.07
DDX55-207ENST00000540763 UMODL1Q5DID0 1318 aa21.71■■□□□ 1.07
DDX55-207ENST00000540763 LAMA3Q16787 3333 aa21.71■■□□□ 1.07
DDX55-207ENST00000540763 IGKV6-21A0A0C4DH24 114 aa21.7■■□□□ 1.06
DDX55-207ENST00000540763 SOX1O00570 391 aaPredicted RBP21.7■■□□□ 1.06
DDX55-207ENST00000540763 PFKMP08237 780 aa21.7■■□□□ 1.06
DDX55-207ENST00000540763 IQCF3P0C7M6 154 aa21.7■■□□□ 1.06
DDX55-207ENST00000540763 TMOD1P28289 359 aa21.7■■□□□ 1.06
DDX55-207ENST00000540763 MAGEA10P43363 369 aaPredicted RBP21.7■■□□□ 1.06
DDX55-207ENST00000540763 CEBPZQ03701 1054 aaKnown RBP21.7■■□□□ 1.06
DDX55-207ENST00000540763 FPGSQ05932 587 aa21.7■■□□□ 1.06
DDX55-207ENST00000540763 TRAF7Q6Q0C0 670 aa21.7■■□□□ 1.06
DDX55-207ENST00000540763 KRI1Q8N9T8 703 aaKnown RBP21.7■■□□□ 1.06
DDX55-207ENST00000540763 CEP170P1Q96L14 293 aa21.7■■□□□ 1.06
DDX55-207ENST00000540763 MMTAG2Q9BU76 263 aaKnown RBP21.7■■□□□ 1.06
DDX55-207ENST00000540763 NT5C3AQ9H0P0 336 aa21.7■■□□□ 1.06
DDX55-207ENST00000540763 DHX33Q9H6R0 707 aaKnown RBP21.7■■□□□ 1.06
DDX55-207ENST00000540763 SPTLC2O15270 562 aa21.69■■□□□ 1.06
DDX55-207ENST00000540763 MAFO75444 373 aaPredicted RBP21.69■■□□□ 1.06
DDX55-207ENST00000540763 THPOP40225 353 aa21.69■■□□□ 1.06
DDX55-207ENST00000540763 ZNF618Q5T7W0 954 aa21.69■■□□□ 1.06
DDX55-207ENST00000540763 PLA2G4FQ68DD2 849 aa21.69■■□□□ 1.06
DDX55-207ENST00000540763 POTEGQ6S5H5 508 aa21.69■■□□□ 1.06
DDX55-207ENST00000540763 KCNG4Q8TDN1 519 aa21.69■■□□□ 1.06
DDX55-207ENST00000540763 SLC7A3Q8WY07 619 aa21.69■■□□□ 1.06
DDX55-207ENST00000540763 LRCH3Q96II8 777 aa21.69■■□□□ 1.06
DDX55-207ENST00000540763 TMEM150BA6NC51 233 aa21.68■■□□□ 1.06
DDX55-207ENST00000540763 PP2D1A8MPX8 630 aa21.68■■□□□ 1.06
DDX55-207ENST00000540763 MARCKSP29966 332 aaPredicted RBP21.68■■□□□ 1.06
DDX55-207ENST00000540763 RARRES1P49788 294 aa21.68■■□□□ 1.06
DDX55-207ENST00000540763 KRT85P78386 507 aa21.68■■□□□ 1.06
DDX55-207ENST00000540763 DNM1Q05193 864 aaKnown RBP21.68■■□□□ 1.06
DDX55-207ENST00000540763 XKR9Q5GH70 373 aa21.68■■□□□ 1.06
DDX55-207ENST00000540763 IER5Q5VY09 327 aa21.68■■□□□ 1.06
DDX55-207ENST00000540763 DNAJB3Q8WWF6 145 aa21.68■■□□□ 1.06
DDX55-207ENST00000540763 CCDC43Q96MW1 224 aaKnown RBP21.68■■□□□ 1.06
DDX55-207ENST00000540763 CCSER1Q9C0I3 900 aa21.68■■□□□ 1.06
DDX55-207ENST00000540763 TSHZ2Q9NRE2 1034 aa21.68■■□□□ 1.06
DDX55-207ENST00000540763 TFIP11Q9UBB9 837 aaKnown RBP21.68■■□□□ 1.06
DDX55-207ENST00000540763 RSPH10B2B2RC85 870 aa21.67■■□□□ 1.06
DDX55-207ENST00000540763 M0QZ92 97 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms