RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 NEIL1Q96FI4 390 aaPredicted RBP6.28□□□□□ -1.4
NPM1-212ENST00000524204 RCC1LQ96I51 464 aaKnown RBP6.28□□□□□ -1.4
NPM1-212ENST00000524204 AJUBAQ96IF1 538 aa6.28□□□□□ -1.4
NPM1-212ENST00000524204 GBP3Q9H0R5 595 aa6.28□□□□□ -1.4
NPM1-212ENST00000524204 SFMBT1Q9UHJ3 866 aa6.28□□□□□ -1.4
NPM1-212ENST00000524204 SHTN1A0MZ66 631 aa6.27□□□□□ -1.41
NPM1-212ENST00000524204 IFRD1O00458 451 aaPredicted RBP6.27□□□□□ -1.41
NPM1-212ENST00000524204 SCGB1D2O95969 90 aa6.27□□□□□ -1.41
NPM1-212ENST00000524204 ADH4P08319 380 aa6.27□□□□□ -1.41
NPM1-212ENST00000524204 CYP4F3Q08477 520 aa6.27□□□□□ -1.41
NPM1-212ENST00000524204 TUBA3CQ13748 450 aa6.27□□□□□ -1.41
NPM1-212ENST00000524204 LONRF2Q1L5Z9 754 aa6.27□□□□□ -1.41
NPM1-212ENST00000524204 TUBA3EQ6PEY2 450 aa6.27□□□□□ -1.41
NPM1-212ENST00000524204 MAMDC4Q6UXC1 1216 aa6.27□□□□□ -1.41
NPM1-212ENST00000524204 PROSER1Q86XN7 944 aa6.27□□□□□ -1.41
NPM1-212ENST00000524204 Q8N1Y9 231 aa6.27□□□□□ -1.41
NPM1-212ENST00000524204 RBBP8NLQ8NC74 664 aaPredicted RBP6.27□□□□□ -1.41
NPM1-212ENST00000524204 WRNIP1Q96S55 665 aa6.27□□□□□ -1.41
NPM1-212ENST00000524204 FAM126AQ9BYI3 521 aaPredicted RBP6.27□□□□□ -1.41
NPM1-212ENST00000524204 CCDC180Q9P1Z9 1646 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 GOLGA6CA6NDK9 693 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 GOLGA6BA6NDN3 693 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 TADA3O75528 432 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 RAD17O75943 681 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 FOSP01100 380 aaPredicted RBP6.26□□□□□ -1.41
NPM1-212ENST00000524204 GOLGA6DP0CG33 693 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 POU3F3P20264 500 aaPredicted RBP6.26□□□□□ -1.41
NPM1-212ENST00000524204 MCL1Q07820 350 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 PABPC4Q13310 644 aaKnown RBP eCLIP6.26□□□□□ -1.411e-323■■■■■ 60.6
NPM1-212ENST00000524204 SLC4A10Q6U841 1118 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 KSR2Q6VAB6 950 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 EEPD1Q7L9B9 569 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 FAM178BQ8IXR5 827 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 NME8Q8N427 588 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 UBR7Q8N806 425 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 PPM1EQ8WY54 764 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 ZNF700Q9H0M5 742 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 GOLGA6AQ9NYA3 693 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 FBXL7Q9UJT9 491 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 MAPRE3Q9UPY8 281 aa6.26□□□□□ -1.41
NPM1-212ENST00000524204 A0A087X0B3 334 aa6.25□□□□□ -1.41
NPM1-212ENST00000524204 HGSO14964 777 aaPredicted RBP6.25□□□□□ -1.41
NPM1-212ENST00000524204 RFPL3O75679 317 aa6.25□□□□□ -1.41
NPM1-212ENST00000524204 BCL6P41182 706 aa6.25□□□□□ -1.41
NPM1-212ENST00000524204 NEK2P51955 445 aa6.25□□□□□ -1.41
NPM1-212ENST00000524204 LRRC41Q15345 812 aa6.25□□□□□ -1.41
NPM1-212ENST00000524204 CCDC142Q17RM4 750 aa6.25□□□□□ -1.41
NPM1-212ENST00000524204 WDR78Q5VTH9 848 aa6.25□□□□□ -1.41
NPM1-212ENST00000524204 C6orf15Q6UXA7 325 aaPredicted RBP6.25□□□□□ -1.41
NPM1-212ENST00000524204 C14orf80Q86SX3 495 aa6.25□□□□□ -1.41
NPM1-212ENST00000524204 GLCCI1Q86VQ1 547 aa6.25□□□□□ -1.41
NPM1-212ENST00000524204 C19orf47Q8N9M1 422 aaKnown RBP6.25□□□□□ -1.41
NPM1-212ENST00000524204 FRS2Q8WU20 508 aa6.25□□□□□ -1.41
NPM1-212ENST00000524204 TRMT2BQ96GJ1 504 aaKnown RBP6.25□□□□□ -1.41
NPM1-212ENST00000524204 ZIM2Q9NZV7 527 aa6.25□□□□□ -1.41
NPM1-212ENST00000524204 TIMM13Q9Y5L4 95 aaPredicted RBP6.25□□□□□ -1.41
NPM1-212ENST00000524204 E2F8A0AVK6 867 aa6.24□□□□□ -1.41
NPM1-212ENST00000524204 IQCA1LA6NCM1 817 aa6.24□□□□□ -1.41
NPM1-212ENST00000524204 NPHP1O15259 732 aa6.24□□□□□ -1.41
NPM1-212ENST00000524204 KCNH1O95259 989 aa6.24□□□□□ -1.41
NPM1-212ENST00000524204 KNG1P01042 644 aa6.24□□□□□ -1.41
NPM1-212ENST00000524204 FAM153BP0C7A2 387 aa6.24□□□□□ -1.41
NPM1-212ENST00000524204 ZNF888P0CJ79 500 aaPredicted RBP6.24□□□□□ -1.41
NPM1-212ENST00000524204 RAB27AP51159 221 aa6.24□□□□□ -1.41
NPM1-212ENST00000524204 DDX46Q7L014 1031 aaKnown RBP6.24□□□□□ -1.41
NPM1-212ENST00000524204 RNF180Q86T96 592 aa6.24□□□□□ -1.41
NPM1-212ENST00000524204 LRRC47Q8N1G4 583 aaKnown RBP6.24□□□□□ -1.41
NPM1-212ENST00000524204 ZNF483Q8TF39 744 aaPredicted RBP6.24□□□□□ -1.41
NPM1-212ENST00000524204 IPO9Q96P70 1041 aaKnown RBP6.24□□□□□ -1.41
NPM1-212ENST00000524204 ARPC5LQ9BPX5 153 aa6.24□□□□□ -1.41
NPM1-212ENST00000524204 SPATA9Q9BWV2 254 aa6.24□□□□□ -1.41
NPM1-212ENST00000524204 PCDHB4Q9Y5E5 795 aa6.24□□□□□ -1.41
NPM1-212ENST00000524204 B2RBV5 119 aa6.23□□□□□ -1.41
NPM1-212ENST00000524204 KATNA1O75449 491 aa6.23□□□□□ -1.41
NPM1-212ENST00000524204 ACRV1P26436 265 aa6.23□□□□□ -1.41
NPM1-212ENST00000524204 KRTAP10-11P60412 298 aa6.23□□□□□ -1.41
NPM1-212ENST00000524204 RPL11P62913 178 aaKnown RBP6.23□□□□□ -1.41
NPM1-212ENST00000524204 CLEC4GQ6UXB4 293 aa6.23□□□□□ -1.41
NPM1-212ENST00000524204 PASD1Q8IV76 773 aa6.23□□□□□ -1.41
NPM1-212ENST00000524204 CCDC103Q8IW40 242 aa6.23□□□□□ -1.41
NPM1-212ENST00000524204 PAF1Q8N7H5 531 aa6.23□□□□□ -1.41
NPM1-212ENST00000524204 ZBTB38Q8NAP3 1195 aaPredicted RBP6.23□□□□□ -1.41
NPM1-212ENST00000524204 TTC8Q8TAM2 541 aa6.23□□□□□ -1.41
NPM1-212ENST00000524204 NPLOC4Q8TAT6 608 aa6.23□□□□□ -1.41
NPM1-212ENST00000524204 KLHL6Q8WZ60 621 aa6.23□□□□□ -1.41
NPM1-212ENST00000524204 AASDHPPTQ9NRN7 309 aa6.23□□□□□ -1.41
NPM1-212ENST00000524204 APEX2Q9UBZ4 518 aa6.23□□□□□ -1.41
NPM1-212ENST00000524204 AKT3Q9Y243 479 aa6.23□□□□□ -1.41
NPM1-212ENST00000524204 SLC12A7Q9Y666 1083 aa6.23□□□□□ -1.41
NPM1-212ENST00000524204 KRTAP29-1A8MX34 341 aaPredicted RBP6.22□□□□□ -1.41
NPM1-212ENST00000524204 AKAP10O43572 662 aa6.22□□□□□ -1.41
NPM1-212ENST00000524204 RAMP2O60895 175 aa6.22□□□□□ -1.41
NPM1-212ENST00000524204 HSP90AA1P07900 732 aaKnown RBP6.22□□□□□ -1.41
NPM1-212ENST00000524204 MAKP20794 623 aa6.22□□□□□ -1.41
NPM1-212ENST00000524204 BMP5P22003 454 aa6.22□□□□□ -1.41
NPM1-212ENST00000524204 POU5F1BQ06416 359 aa6.22□□□□□ -1.41
NPM1-212ENST00000524204 FOXD4Q12950 439 aaPredicted RBP6.22□□□□□ -1.41
NPM1-212ENST00000524204 SMAD2Q15796 467 aaKnown RBP6.22□□□□□ -1.41
NPM1-212ENST00000524204 STEAP3Q658P3 488 aa6.22□□□□□ -1.41
NPM1-212ENST00000524204 CNNM4Q6P4Q7 775 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms