RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 SNX17Q15036 470 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 CRY1Q16526 586 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 NKG7Q16617 165 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 KIF4BQ2VIQ3 1234 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 ZACNQ401N2 412 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 CCDC157Q569K6 752 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 CT83Q5H943 113 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 ZBTB37Q5TC79 503 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 FAM205BPQ63HN1 556 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 HAUS3Q68CZ6 603 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 ELMSAN1Q6PJG2 1045 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 LMBR1LQ6UX01 489 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 C16orf59Q7L2K0 433 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 CDC37L1Q7L3B6 337 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 GALNT15Q8N3T1 639 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 AFAP1L1Q8TED9 768 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 CYB5D2Q8WUJ1 264 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 IPCEF1Q8WWN9 437 aaPredicted RBP4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 SSH1Q8WYL5 1049 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 TBC1D31Q96DN5 1066 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 RADILQ96JH8 1075 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 MAELQ96JY0 434 aaKnown RBP4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 ACAP3Q96P50 834 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 ORAI2Q96SN7 254 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 CNPPD1Q9BV87 410 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 KATNAL1Q9BW62 490 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 LSM14BQ9BX40 385 aaKnown RBP4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 ANO3Q9BYT9 981 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 BTBD1Q9H0C5 482 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 SOX17Q9H6I2 414 aaPredicted RBP4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 IPPKQ9H8X2 491 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 OBP2BQ9NPH6 170 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 DACT1Q9NYF0 836 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 CEP72Q9P209 647 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 TMEFF2Q9UIK5 374 aaPredicted RBP4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 HCN2Q9UL51 889 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 CBLCQ9ULV8 474 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 SF3B6Q9Y3B4 125 aaKnown RBP4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 PCDHB12Q9Y5F1 795 aa4.55□□□□□ -1.68
RNU4-60P-201ENST00000517239 TTC24A2A3L6 582 aaPredicted RBP4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 ARNTLO00327 626 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 FANCGO15287 622 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 FRS3O43559 492 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 BNIP3LO60238 219 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 PPFIA3O75145 1194 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 TADA3O75528 432 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 IGHDP01880 384 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 MYCLP12524 364 aaPredicted RBP4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 RAC2P15153 192 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 VEGFAP15692 232 aaPredicted RBP4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 LTBRP36941 435 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 SLC19A1P41440 591 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 AFF1P51825 1210 aaKnown RBP4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 NR1H2P55055 460 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 NEXNQ0ZGT2 675 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 MBTPS1Q14703 1052 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 TIGD6Q17RP2 521 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 MPEG1Q2M385 716 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 NBPF9Q3BBW0 867 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 ARL13BQ3SXY8 428 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 PKDCCQ504Y2 493 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 KLHDC7AQ5VTJ3 777 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 PRAMEF13Q5VWM6 474 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 JMJD6Q6NYC1 403 aaPredicted RBP4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 CCDC129Q6ZRS4 1044 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 OSTM1Q86WC4 334 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 C7orf31Q8N865 590 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 ANKRD52Q8NB46 1076 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 KLHDC4Q8TBB5 520 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 ZNF566Q969W8 418 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 EAF2Q96CJ1 260 aaPredicted RBP4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 RRP36Q96EU6 259 aaKnown RBP4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 KCNJ15Q99712 375 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 DSCC1Q9BVC3 393 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 BOCQ9BWV1 1114 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 CCDC68Q9H2F9 335 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 PCIF1Q9H4Z3 704 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 ARMT1Q9H993 441 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 JMJD4Q9H9V9 463 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 ZNF287Q9HBT7 754 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 ZSWIM5Q9P217 1185 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 TMCC3Q9ULS5 477 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 RNF112Q9ULX5 631 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 NPFFR2Q9Y5X5 522 aa4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 RSF1Q96T23 1441 aaPredicted RBP4.54□□□□□ -1.68
RNU4-60P-201ENST00000517239 SLC12A8A0AV02 714 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 CCDC154A6NI56 674 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 TTLL8A6PVC2 850 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 FAM47E-STBD1D6RA91 191 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 DVL2O14641 736 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 KCNK3O14649 394 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 EIF4EBP3O60516 100 aaPredicted RBP4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 SLC3A2P08195 630 aaKnown RBP4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 PARP1P09874 1014 aaKnown RBP4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 CLEC2LP0C7M8 214 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 IDEP14735 1019 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 TSHRP16473 764 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 KRT15P19012 456 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 ENPP1P22413 925 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 CAP2P40123 477 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms