RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ADAM9Q13443 819 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 SURF1Q15526 300 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 PIK3R6Q5UE93 754 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 PKN3Q6P5Z2 889 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 TRMT10BQ6PF06 316 aaKnown RBP5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 PLEKHH3Q7Z736 793 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 KIAA0907Q7Z7F0 614 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 DTX3Q8N9I9 347 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 SH3RF2Q8TEC5 729 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 TRIM44Q96DX7 344 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 LCORQ96JN0 433 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 CLUHP3Q96NS8 147 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 TMPRSS5Q9H3S3 457 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 SMURF1Q9HCE7 757 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 TBX22Q9Y458 520 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 LAS1LQ9Y4W2 734 aaKnown RBP5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 ASB1Q9Y576 335 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 PRDM2Q13029 1718 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 TCRBV5S4A2TA0A5A2 114 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 DNAJC8O75937 253 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 POU3F2P20265 443 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 PTGS1P23219 599 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 SDHAP31040 664 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 IL13P35225 146 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 TNNT2P45379 298 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 CDCA2Q69YH5 1023 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 SDE2Q6IQ49 451 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 CC2D1AQ6P1N0 951 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 GIMAP6Q6P9H5 292 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 CXXC5Q7LFL8 322 aaKnown RBP5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 OTOP1Q7RTM1 612 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 LRRTM3Q86VH5 581 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 RBM12BQ8IXT5 1001 aaKnown RBP5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 ZZZ3Q8IYH5 903 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 HIPK4Q8NE63 616 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 ADAMTS17Q8TE56 1095 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 ZNF526Q8TF50 670 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 ORAI3Q9BRQ5 295 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 KANSL2Q9H9L4 492 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 SPATA6Q9NWH7 488 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 PRDM4Q9UKN5 801 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 B3GALT1Q9Y5Z6 326 aa5.83□□□□□ -1.48
HMGB3P13-201ENST00000511263 FAM90A27PA6NNH2 459 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 H0Y858 1186 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 FOXP2O15409 715 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 CUTAO60888 179 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 FNTBP49356 437 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 SCNN1BP51168 640 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 FAM193AP78312 1265 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 MAP3K12Q12852 859 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 RTP5Q14D33 572 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 ZNF568Q3ZCX4 644 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 CNNM4Q6P4Q7 775 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 FRMD5Q7Z6J6 570 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 STK32CQ86UX6 486 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 IFNL2Q8IZJ0 200 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 LGI4Q8N135 537 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 DDX1Q92499 740 aaKnown RBP5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 ZSWIM3Q96MP5 696 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 INCENPQ9NQS7 918 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 GALNT8Q9NY28 637 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 B4GALT6Q9UBX8 382 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 ZFP69BQ9UJL9 534 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 TELO2Q9Y4R8 837 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 RUSC2Q8N2Y8 1516 aa5.82□□□□□ -1.48
HMGB3P13-201ENST00000511263 PTPDC1A2A3K4 754 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 MROH6A6NGR9 719 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 ACOT7O00154 380 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 CBX4O00257 560 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 DDX3XO00571 662 aaKnown RBP eCLIP5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 GLRX3O76003 335 aaKnown RBP5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 C4BPAP04003 597 aaKnown RBP5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 TPM2P07951 284 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 CPEP16870 476 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 ZNF28P17035 718 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 KCNA6P17658 529 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 AOAHP28039 575 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 IRX3P78415 501 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 PLP2Q04941 152 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 ADCY1Q08828 1119 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 TMEM132BQ14DG7 1078 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 ZXDCQ2QGD7 858 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 RGL3Q3MIN7 710 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 PRR31Q5SQ13 230 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 NT5DC1Q5TFE4 455 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 C11orf74Q86VG3 221 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 NOSTRINQ8IVI9 506 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 REXO1L1PQ8IX06 675 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 SMAP1Q8IYB5 467 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 ADGRG2Q8IZP9 1017 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 KLHL36Q8N4N3 616 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 OR2W6PQ8NHA6 318 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 SPATA25Q9BR10 227 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 GOLGA3Q08378 1498 aa5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 MAGI1Q96QZ7 1491 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P13-201ENST00000511263 KRT37O76014 449 aa5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 INSRRP14616 1297 aa5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 SDSP20132 328 aa5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 MECP2P51608 486 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms