RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 SLC4A7Q9Y6M7 1214 aa5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 B4E1Z4 1266 aa5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 GOLGA6L22H0YM25 854 aa5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 CBX4O00257 560 aa5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 KPNA6O60684 536 aa5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 RFPL3O75679 317 aa5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 ETV4P43268 484 aa5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 MOGSQ13724 837 aa5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 RNF151Q2KHN1 245 aa5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 CREB3L3Q68CJ9 461 aa5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 OTOP2Q7RTS6 562 aa5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 GGNQ86UU5 652 aa5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 CARD11Q9BXL7 1154 aa5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 ZDHHC5Q9C0B5 715 aa5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 H2AFY2Q9P0M6 372 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 CNOT11Q9UKZ1 510 aaKnown RBP5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 ASB1Q9Y576 335 aa5.07□□□□□ -1.6
HMGB1P29-201ENST00000505659 CUTAO60888 179 aa5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 HMGCRP04035 888 aa5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 ZNF20P17024 532 aa5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 PTX3P26022 381 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 STAT5BP51692 787 aa5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 TCEA2Q15560 299 aa5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 CFAP100Q494V2 611 aa5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 SLFN13Q68D06 897 aa5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 CC2D1AQ6P1N0 951 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 C16orf86Q6ZW13 317 aa5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 CIR1Q86X95 450 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 HOMER1Q86YM7 354 aa5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 IFNL2Q8IZJ0 200 aa5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 SAMD11Q96NU1 681 aa5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 CD248Q9HCU0 757 aa5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 MAGEL2Q9UJ55 1249 aa5.06□□□□□ -1.6
HMGB1P29-201ENST00000505659 ZNF891A8MT65 544 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 MATN2O00339 956 aa5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 SLC9A1P19634 815 aa5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 RGS3P49796 1198 aa5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 ALDH6A1Q02252 535 aaKnown RBP5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 TMEM200BQ69YZ2 307 aa5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 ESRP1Q6NXG1 681 aaKnown RBP5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 CXXC5Q7LFL8 322 aaKnown RBP5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 FILIP1Q7Z7B0 1213 aa5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 DHX37Q8IY37 1157 aaKnown RBP5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 NXPE1Q8N323 547 aa5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 KIAA1958Q8N8K9 716 aa5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 DNERQ8NFT8 737 aa5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 APPBP2Q92624 585 aa5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 NEIL1Q96FI4 390 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 WWC2-AS2Q96NR7 200 aa5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 LMF1Q96S06 567 aa5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 DPYSL5Q9BPU6 564 aa5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 KRTAP4-2Q9BYR5 136 aa5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 CABP5Q9NP86 173 aa5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 MAGEC2Q9UBF1 373 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 B4GALT6Q9UBX8 382 aa5.05□□□□□ -1.6
HMGB1P29-201ENST00000505659 A0A0G2JNJ9 132 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 H7C1D1 291 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 FOXS1O43638 330 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 CDC45O75419 566 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 PRLP01236 227 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 INSRRP14616 1297 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 SLC6A3Q01959 620 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 EIF4HQ15056 248 aaKnown RBP5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 PCOLCEQ15113 449 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 CDSNQ15517 529 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 ARHGAP44Q17R89 818 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 GRAMD4Q6IC98 578 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 TCTN3Q6NUS6 607 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 ZNF585AQ6P3V2 769 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 CNNM4Q6P4Q7 775 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 UBE2R2Q712K3 238 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 BCL6BQ8N143 479 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 TTC9BQ8N6N2 239 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 CHST13Q8NET6 341 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 WDR48Q8TAF3 677 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 ELF4Q99607 663 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 FOXB1Q99853 325 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 KRTAP4-11Q9BYQ6 195 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 MTFR1LQ9H019 292 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 PCIF1Q9H4Z3 704 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 USP35Q9P2H5 1018 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 Q9UFV3 132 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 NR2E1Q9Y466 385 aa5.04□□□□□ -1.6
HMGB1P29-201ENST00000505659 PATE3B3GLJ2 98 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 ATP2A2P16615 1042 aaKnown RBP5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 APEX1P27695 318 aaKnown RBP5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 FLT3P36888 993 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 RANGAP1P46060 587 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 FNTBP49356 437 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 MRE11P49959 708 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 NEK4P51957 841 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 PCBP1Q15365 356 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 ZNF568Q3ZCX4 644 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 AGBL4Q5VU57 503 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 TRIM68Q6AZZ1 485 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 LRRTM3Q86VH5 581 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 TAX1BP1Q86VP1 789 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 PALM2Q8IXS6 379 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 NIM1KQ8IY84 436 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 OR14K1Q8NGZ2 314 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms