RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ECI1P42126 302 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 GRK6P43250 576 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 TM4SF4P48230 202 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 ZNF445P59923 1031 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 DSG1Q02413 1049 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 NMIQ13287 307 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 TERF2Q15554 542 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 CYP27C1Q4G0S4 372 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 TSHZ3Q63HK5 1081 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 GTF2IRD2BQ6EKJ0 949 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 BEND4Q6ZU67 534 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 CCDC149Q6ZUS6 474 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 USP53Q70EK8 1073 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 TBC1D1Q86TI0 1168 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 GTF2IRD2Q86UP8 949 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 TXNRD3Q86VQ6 643 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 ZSCAN30Q86W11 494 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 KSR1Q8IVT5 923 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 NAXEQ8NCW5 288 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 GIMAP8Q8ND71 665 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 SYTL5Q8TDW5 730 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 CHTF18Q8WVB6 975 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 EZH1Q92800 747 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 DIO2Q92813 273 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 NELL1Q92832 810 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 PTPRN2Q92932 1015 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 SECISBP2LQ93073 1101 aaKnown RBP5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 TRIM63Q969Q1 353 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 FAM46AQ96IP4 442 aaKnown RBP5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 PPM1MQ96MI6 270 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 KIAA1586Q9HCI6 787 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 ALG13Q9NP73 1137 aaKnown RBP5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 CHST7Q9NS84 486 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 CDC23Q9UJX2 597 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 RNF112Q9ULX5 631 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 POLHQ9Y253 713 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 GPR55Q9Y2T6 319 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 AFG3L2Q9Y4W6 797 aa5.09□□□□□ -1.59
HMGB1P21-201ENST00000502313 NOS1P29475 1434 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 CNTNAP5Q8WYK1 1306 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 A0A1B0GVC2 190 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 WDR64B1ANS9 1081 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 EYA2O00167 538 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 CBX4O00257 560 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 H2AFYO75367 372 aaKnown RBP5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 OFD1O75665 1012 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 GFPT2O94808 682 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 ARHGEF15O94989 841 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 ZBED1O96006 694 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 CFBP00751 764 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 CD4P01730 458 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 GSNP06396 782 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 CD3EP07766 207 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 TGFB3P10600 412 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 HSD3B1P14060 373 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 CAPN3P20807 821 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 HOXC12P31275 282 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 NOP2P46087 812 aaKnown RBP5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 SCAND1P57086 179 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 CYP27A1Q02318 531 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 APBA1Q02410 837 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 MBTPS1Q14703 1052 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 KIAA0753Q2KHM9 967 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 DPY19L1Q2PZI1 675 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 AGAP9Q5VTM2 703 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 Q6ZS46 218 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 MAMDC2Q7Z304 686 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 MTDHQ86UE4 582 aaKnown RBP5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 KIF18BQ86Y91 864 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 FAM20CQ8IXL6 584 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 ARHGEF39Q8N4T4 335 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 FAM26EQ8N5C1 309 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 PPP1R35Q8TAP8 253 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 TBC1D20Q96BZ9 403 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 GCC1Q96CN9 775 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 RIPOR3Q96MK2 946 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 TTC14Q96N46 770 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 TBC1D32Q96NH3 1257 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 ORAI3Q9BRQ5 295 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 DUSP23Q9BVJ7 150 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 PRDM14Q9GZV8 571 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 KMT5AQ9NQR1 393 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 GPATCH2Q9NW75 528 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 STK17AQ9UEE5 414 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 LRCH1Q9Y2L9 728 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 MRFAP1Q9Y605 127 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 LRRFIP2Q9Y608 721 aaKnown RBP5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 CLTCQ00610 1675 aaKnown RBP5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 LTBP4Q8N2S1 1624 aa5.08□□□□□ -1.6
HMGB1P21-201ENST00000502313 MED14O60244 1454 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 ARHGAP23Q9P227 1491 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 PTPRTO14522 1441 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 KRBA1A5PL33 1030 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 KLHL33A6NCF5 533 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 B4E1Z4 1266 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 AQP7O14520 342 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 SIGLEC6O43699 453 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 ULK1O75385 1050 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 PRAMEF1O95521 474 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms