RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 NOC2LQ9Y3T9 749 aaKnown RBP17.92■□□□□ 0.46
HDAC6-236ENST00000498808 FGFR1P11362 822 aa17.91■□□□□ 0.46
HDAC6-236ENST00000498808 ASTLQ6HA08 431 aaPredicted RBP17.91■□□□□ 0.46
HDAC6-236ENST00000498808 SLC24A5Q71RS6 500 aa17.91■□□□□ 0.46
HDAC6-236ENST00000498808 PLEKHM2Q8IWE5 1019 aa17.91■□□□□ 0.46
HDAC6-236ENST00000498808 JPH1Q9HDC5 661 aaPredicted RBP17.91■□□□□ 0.46
HDAC6-236ENST00000498808 ENTPD7Q9NQZ7 604 aa17.91■□□□□ 0.46
HDAC6-236ENST00000498808 C1orf112Q9NSG2 853 aa17.91■□□□□ 0.46
HDAC6-236ENST00000498808 GINS2Q9Y248 185 aa17.91■□□□□ 0.46
HDAC6-236ENST00000498808 RPS6KA5O75582 802 aa17.9■□□□□ 0.46
HDAC6-236ENST00000498808 ASGR2P07307 311 aa17.9■□□□□ 0.46
HDAC6-236ENST00000498808 LAG3P18627 525 aa17.9■□□□□ 0.46
HDAC6-236ENST00000498808 PDE4AP27815 886 aa17.9■□□□□ 0.46
HDAC6-236ENST00000498808 MTHFD1LQ6UB35 978 aa17.9■□□□□ 0.46
HDAC6-236ENST00000498808 ADSSL1Q8N142 457 aa17.9■□□□□ 0.46
HDAC6-236ENST00000498808 NME8Q8N427 588 aa17.9■□□□□ 0.46
HDAC6-236ENST00000498808 OSBPL3Q9H4L5 887 aa17.9■□□□□ 0.46
HDAC6-236ENST00000498808 AZI2Q9H6S1 392 aa17.9■□□□□ 0.46
HDAC6-236ENST00000498808 NGRNQ9NPE2 291 aaKnown RBP17.9■□□□□ 0.46
HDAC6-236ENST00000498808 JADE2Q9NQC1 790 aa17.9■□□□□ 0.46
HDAC6-236ENST00000498808 DENND3A2RUS2 1198 aa17.89■□□□□ 0.45
HDAC6-236ENST00000498808 HIP1O00291 1037 aa17.89■□□□□ 0.45
HDAC6-236ENST00000498808 TRDNQ13061 729 aa17.89■□□□□ 0.45
HDAC6-236ENST00000498808 WTAPQ15007 396 aa17.89■□□□□ 0.45
HDAC6-236ENST00000498808 CASP10Q92851 521 aa17.89■□□□□ 0.45
HDAC6-236ENST00000498808 SPZ1Q9BXG8 430 aa17.89■□□□□ 0.45
HDAC6-236ENST00000498808 ADAM7Q9H2U9 754 aa17.89■□□□□ 0.45
HDAC6-236ENST00000498808 TMEM161AQ9NX61 479 aa17.89■□□□□ 0.45
HDAC6-236ENST00000498808 SLC9A2Q9UBY0 812 aa17.89■□□□□ 0.45
HDAC6-236ENST00000498808 PUF60Q9UHX1 559 aaKnown RBP17.89■□□□□ 0.45
HDAC6-236ENST00000498808 ST3GAL5Q9UNP4 418 aa17.89■□□□□ 0.45
HDAC6-236ENST00000498808 HCFC2Q9Y5Z7 792 aa17.89■□□□□ 0.45
HDAC6-236ENST00000498808 ERICH2A1L162 156 aa17.88■□□□□ 0.45
HDAC6-236ENST00000498808 ARP10275 920 aa17.88■□□□□ 0.45
HDAC6-236ENST00000498808 PBX3P40426 434 aa17.88■□□□□ 0.45
HDAC6-236ENST00000498808 UBE2SQ16763 222 aa17.88■□□□□ 0.45
HDAC6-236ENST00000498808 TPRNQ4KMQ1 711 aa17.88■□□□□ 0.45
HDAC6-236ENST00000498808 CWF19L1Q69YN2 538 aaKnown RBP17.88■□□□□ 0.45
HDAC6-236ENST00000498808 MCTP2Q6DN12 878 aa17.88■□□□□ 0.45
HDAC6-236ENST00000498808 LRRC55Q6ZSA7 311 aa17.88■□□□□ 0.45
HDAC6-236ENST00000498808 PLPPR4Q7Z2D5 763 aa17.88■□□□□ 0.45
HDAC6-236ENST00000498808 TNPO1Q92973 898 aaKnown RBP17.88■□□□□ 0.45
HDAC6-236ENST00000498808 RRP36Q96EU6 259 aaKnown RBP17.88■□□□□ 0.45
HDAC6-236ENST00000498808 NECTIN4Q96NY8 510 aa17.88■□□□□ 0.45
HDAC6-236ENST00000498808 ATP6V0A4Q9HBG4 840 aa17.88■□□□□ 0.45
HDAC6-236ENST00000498808 TAF6LQ9Y6J9 622 aa17.88■□□□□ 0.45
HDAC6-236ENST00000498808 EVPLQ92817 2033 aa17.88■□□□□ 0.45
HDAC6-236ENST00000498808 MAFGO15525 162 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 CYP21A2P08686 494 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 WEE2P0C1S8 567 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 KLRC1P26715 233 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 STAT5BP51692 787 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 CLCN5P51795 746 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 ACTR2P61160 394 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 FAM189BP81408 668 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 ITIH3Q06033 890 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 CES5AQ6NT32 575 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 KCNT2Q6UVM3 1135 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 FAM43BQ6ZT52 329 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-236ENST00000498808 CATIPQ7Z7H3 387 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 KIAA0319LQ8IZA0 1049 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 TMEM117Q9H0C3 514 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 PSTPIP2Q9H939 334 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 RNF19AQ9NV58 838 aa17.87■□□□□ 0.45
HDAC6-236ENST00000498808 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-236ENST00000498808 EP300Q09472 2414 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-236ENST00000498808 ANTXR2P58335 489 aa17.86■□□□□ 0.45
HDAC6-236ENST00000498808 DSC3Q14574 896 aa17.86■□□□□ 0.45
HDAC6-236ENST00000498808 DIEXFQ68CQ4 756 aaKnown RBP17.86■□□□□ 0.45
HDAC6-236ENST00000498808 B4GALNT3Q6L9W6 998 aa17.86■□□□□ 0.45
HDAC6-236ENST00000498808 TMC7Q7Z402 723 aa17.86■□□□□ 0.45
HDAC6-236ENST00000498808 FAM228AQ86W67 206 aa17.86■□□□□ 0.45
HDAC6-236ENST00000498808 CASD1Q96PB1 797 aa17.86■□□□□ 0.45
HDAC6-236ENST00000498808 MYL10Q9BUA6 226 aa17.86■□□□□ 0.45
HDAC6-236ENST00000498808 MFSD1Q9H3U5 465 aa17.86■□□□□ 0.45
HDAC6-236ENST00000498808 ELAC1Q9H777 363 aaKnown RBP17.86■□□□□ 0.45
HDAC6-236ENST00000498808 KCNH7Q9NS40 1196 aa17.86■□□□□ 0.45
HDAC6-236ENST00000498808 SEC63Q9UGP8 760 aaKnown RBP17.86■□□□□ 0.45
HDAC6-236ENST00000498808 C2orf71A6NGG8 1288 aa17.85■□□□□ 0.45
HDAC6-236ENST00000498808 GPR182O15218 404 aa17.85■□□□□ 0.45
HDAC6-236ENST00000498808 CLASP2O75122 1294 aaKnown RBP17.85■□□□□ 0.45
HDAC6-236ENST00000498808 NFASCO94856 1347 aa17.85■□□□□ 0.45
HDAC6-236ENST00000498808 MTHFRP42898 656 aa17.85■□□□□ 0.45
HDAC6-236ENST00000498808 SMC5Q8IY18 1101 aa17.85■□□□□ 0.45
HDAC6-236ENST00000498808 ZDHHC14Q8IZN3 488 aa17.85■□□□□ 0.45
HDAC6-236ENST00000498808 MRPL43Q8N983 215 aaKnown RBP17.85■□□□□ 0.45
HDAC6-236ENST00000498808 TDRD5Q8NAT2 981 aaKnown RBP17.85■□□□□ 0.45
HDAC6-236ENST00000498808 CYP2W1Q8TAV3 490 aa17.85■□□□□ 0.45
HDAC6-236ENST00000498808 IGDCC4Q8TDY8 1250 aa17.85■□□□□ 0.45
HDAC6-236ENST00000498808 ZNF558Q96NG5 402 aa17.85■□□□□ 0.45
HDAC6-236ENST00000498808 PPP1R16BQ96T49 567 aa17.85■□□□□ 0.45
HDAC6-236ENST00000498808 LIMD1Q9UGP4 676 aa17.85■□□□□ 0.45
HDAC6-236ENST00000498808 PCDHA6Q9UN73 950 aa17.85■□□□□ 0.45
HDAC6-236ENST00000498808 PCDHA8Q9Y5H6 950 aa17.85■□□□□ 0.45
HDAC6-236ENST00000498808 SPDYE3A6NKU9 549 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 PI15O43692 258 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 ATG7O95352 703 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 PLEKHA8P1O95397 391 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 SMARCA1P28370 1054 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 PPM1AP35813 382 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms