RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 EVI5O60447 810 aa16.15■□□□□ 0.18
USP11-212ENST00000497179 C22orf31O95567 290 aa16.15■□□□□ 0.18
USP11-212ENST00000497179 XRCC6P12956 609 aaKnown RBP eCLIP16.15■□□□□ 0.18
USP11-212ENST00000497179 ME1P48163 572 aa16.15■□□□□ 0.18
USP11-212ENST00000497179 PTK7Q13308 1070 aa16.15■□□□□ 0.18
USP11-212ENST00000497179 MTERF2Q49AM1 385 aa16.15■□□□□ 0.18
USP11-212ENST00000497179 TMEM119Q4V9L6 283 aa16.15■□□□□ 0.18
USP11-212ENST00000497179 MTHFD1LQ6UB35 978 aa16.15■□□□□ 0.18
USP11-212ENST00000497179 OTUD6AQ7L8S5 288 aa16.15■□□□□ 0.18
USP11-212ENST00000497179 KCTD17Q8N5Z5 321 aa16.15■□□□□ 0.18
USP11-212ENST00000497179 SYMPKQ92797 1274 aaKnown RBP16.15■□□□□ 0.18
USP11-212ENST00000497179 PNMA5Q96PV4 448 aa16.15■□□□□ 0.18
USP11-212ENST00000497179 CCSER1Q9C0I3 900 aa16.15■□□□□ 0.18
USP11-212ENST00000497179 NT5C3AQ9H0P0 336 aa16.15■□□□□ 0.18
USP11-212ENST00000497179 CYP26B1Q9NR63 512 aa16.15■□□□□ 0.18
USP11-212ENST00000497179 DDX19AQ9NUU7 478 aaKnown RBP16.15■□□□□ 0.18
USP11-212ENST00000497179 DBR1Q9UK59 544 aaKnown RBP16.15■□□□□ 0.18
USP11-212ENST00000497179 PCDHA7Q9UN72 937 aa16.15■□□□□ 0.18
USP11-212ENST00000497179 ZBTB39O15060 712 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 KIAA0355O15063 1070 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 CYP2C9P11712 490 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 NPEPPSP55786 919 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 RBL2Q08999 1139 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 GRB10Q13322 594 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 TRIM71Q2Q1W2 868 aaKnown RBP16.14■□□□□ 0.17
USP11-212ENST00000497179 SPECC1Q5M775 1068 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 TAF2Q6P1X5 1199 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 USP49Q70CQ1 688 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 PIGOQ8TEQ8 1089 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 DHX38Q92620 1227 aaKnown RBP16.14■□□□□ 0.17
USP11-212ENST00000497179 DPF3Q92784 378 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 CALML4Q96GE6 196 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 EPSTI1Q96J88 318 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 CEP170P1Q96L14 293 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 TMEM39AQ9NV64 488 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 KIAA1024Q9UPX6 916 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 PCDHA2Q9Y5H9 948 aa16.14■□□□□ 0.17
USP11-212ENST00000497179 MAGEB2O15479 319 aa16.13■□□□□ 0.17
USP11-212ENST00000497179 MAFO75444 373 aaPredicted RBP16.13■□□□□ 0.17
USP11-212ENST00000497179 KLRC1P26715 233 aa16.13■□□□□ 0.17
USP11-212ENST00000497179 TXLNAP40222 546 aa16.13■□□□□ 0.17
USP11-212ENST00000497179 RFC5P40937 340 aa16.13■□□□□ 0.17
USP11-212ENST00000497179 RARRES1P49788 294 aa16.13■□□□□ 0.17
USP11-212ENST00000497179 XKR9Q5GH70 373 aa16.13■□□□□ 0.17
USP11-212ENST00000497179 RUFY4Q6ZNE9 571 aa16.13■□□□□ 0.17
USP11-212ENST00000497179 KCNK18Q7Z418 384 aa16.13■□□□□ 0.17
USP11-212ENST00000497179 SH3RF1Q7Z6J0 888 aa16.13■□□□□ 0.17
USP11-212ENST00000497179 CCDC155Q8N6L0 562 aa16.13■□□□□ 0.17
USP11-212ENST00000497179 CAGE1Q8TC20 777 aa16.13■□□□□ 0.17
USP11-212ENST00000497179 WNT8BQ93098 351 aa16.13■□□□□ 0.17
USP11-212ENST00000497179 ZBTB10Q96DT7 871 aa16.13■□□□□ 0.17
USP11-212ENST00000497179 CDK5RAP3Q96JB5 506 aa16.13■□□□□ 0.17
USP11-212ENST00000497179 CCDC43Q96MW1 224 aaKnown RBP16.13■□□□□ 0.17
USP11-212ENST00000497179 SH2D3AQ9BRG2 576 aa16.13■□□□□ 0.17
USP11-212ENST00000497179 NOC4LQ9BVI4 516 aaKnown RBP16.13■□□□□ 0.17
USP11-212ENST00000497179 LOXHD1Q8IVV2 1947 aa16.12■□□□□ 0.17
USP11-212ENST00000497179 A0A087WWV3 80 aa16.12■□□□□ 0.17
USP11-212ENST00000497179 IGKV6-21A0A0C4DH24 114 aa16.12■□□□□ 0.17
USP11-212ENST00000497179 SMIM35A0A1B0GVV1 85 aa16.12■□□□□ 0.17
USP11-212ENST00000497179 TRIM43BA6NCK2 446 aa16.12■□□□□ 0.17
USP11-212ENST00000497179 PITPNM1O00562 1244 aa16.12■□□□□ 0.17
USP11-212ENST00000497179 EYA4O95677 639 aa16.12■□□□□ 0.17
USP11-212ENST00000497179 RPLP2P05387 115 aaKnown RBP16.12■□□□□ 0.17
USP11-212ENST00000497179 TBC1D8BQ0IIM8 1120 aa16.12■□□□□ 0.17
USP11-212ENST00000497179 KARSQ15046 597 aaKnown RBP16.12■□□□□ 0.17
USP11-212ENST00000497179 ZRSR1Q15695 479 aaKnown RBP16.12■□□□□ 0.17
USP11-212ENST00000497179 SHC4Q6S5L8 630 aa16.12■□□□□ 0.17
USP11-212ENST00000497179 RPAINQ86UA6 219 aa16.12■□□□□ 0.17
USP11-212ENST00000497179 LINC01465Q8N7H1 131 aa16.12■□□□□ 0.17
USP11-212ENST00000497179 TRIM43Q96BQ3 446 aaPredicted RBP16.12■□□□□ 0.17
USP11-212ENST00000497179 JPH2Q9BR39 696 aaPredicted RBP16.12■□□□□ 0.17
USP11-212ENST00000497179 GDPD2Q9HCC8 539 aa16.12■□□□□ 0.17
USP11-212ENST00000497179 PRDM5Q9NQX1 630 aaPredicted RBP16.12■□□□□ 0.17
USP11-212ENST00000497179 DNM3Q9UQ16 869 aa16.12■□□□□ 0.17
USP11-212ENST00000497179 NR2E3Q9Y5X4 410 aa16.12■□□□□ 0.17
USP11-212ENST00000497179 TANC1Q9C0D5 1861 aa16.12■□□□□ 0.17
USP11-212ENST00000497179 LTBP2Q14767 1821 aa16.11■□□□□ 0.17
USP11-212ENST00000497179 E9PMD0 336 aa16.11■□□□□ 0.17
USP11-212ENST00000497179 CAND2O75155 1236 aa16.11■□□□□ 0.17
USP11-212ENST00000497179 PLCG1P19174 1290 aa16.11■□□□□ 0.17
USP11-212ENST00000497179 MLLT1Q03111 559 aaPredicted RBP16.11■□□□□ 0.17
USP11-212ENST00000497179 BFSP2Q13515 415 aa16.11■□□□□ 0.17
USP11-212ENST00000497179 RESP18Q5W5W9 173 aa16.11■□□□□ 0.17
USP11-212ENST00000497179 ADALQ6DHV7 355 aa16.11■□□□□ 0.17
USP11-212ENST00000497179 EXOC8Q8IYI6 725 aa16.11■□□□□ 0.17
USP11-212ENST00000497179 RETREG2Q8NC44 543 aa16.11■□□□□ 0.17
USP11-212ENST00000497179 RASSF8Q8NHQ8 419 aa16.11■□□□□ 0.17
USP11-212ENST00000497179 SLC7A3Q8WY07 619 aa16.11■□□□□ 0.17
USP11-212ENST00000497179 HIPK3Q9H422 1215 aa16.11■□□□□ 0.17
USP11-212ENST00000497179 DHX33Q9H6R0 707 aaKnown RBP16.11■□□□□ 0.17
USP11-212ENST00000497179 CCDC39Q9UFE4 941 aa16.11■□□□□ 0.17
USP11-212ENST00000497179 TCHHQ07283 1943 aa16.11■□□□□ 0.17
USP11-212ENST00000497179 TRIP12Q14669 1992 aaPredicted RBP16.11■□□□□ 0.17
USP11-212ENST00000497179 KAT6AQ92794 2004 aa16.11■□□□□ 0.17
USP11-212ENST00000497179 ARHGEF35A5YM69 484 aa16.1■□□□□ 0.17
USP11-212ENST00000497179 GAS2O43903 313 aaKnown RBP16.1■□□□□ 0.17
USP11-212ENST00000497179 POLGP54098 1239 aaPredicted RBP16.1■□□□□ 0.17
USP11-212ENST00000497179 EMC2Q15006 297 aa16.1■□□□□ 0.17
USP11-212ENST00000497179 RSPH3Q86UC2 560 aa16.1■□□□□ 0.17
USP11-212ENST00000497179 KIAA0319LQ8IZA0 1049 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms