RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 CEP131Q9UPN4 1083 aa15.23■□□□□ 0.03
FDPS-219ENST00000495308 PCDHA2Q9Y5H9 948 aa15.23■□□□□ 0.03
FDPS-219ENST00000495308 CHD9Q3L8U1 2897 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 RSPH10B2B2RC85 870 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 LAD1O00515 517 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 ZBTB39O15060 712 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 NBNO60934 754 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 MED24O75448 989 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 RSPH10BP0C881 870 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 FXR2P51116 673 aaKnown RBP eCLIP15.22■□□□□ 0.03
FDPS-219ENST00000495308 CLCN3P51790 818 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 SF3A1Q15459 793 aaKnown RBP15.22■□□□□ 0.03
FDPS-219ENST00000495308 TMEM240Q5SV17 173 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 ZNF365Q70YC5 407 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 LRRC71Q8N4P6 559 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 ZNF579Q8NAF0 562 aaKnown RBP15.22■□□□□ 0.03
FDPS-219ENST00000495308 NEK9Q8TD19 979 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 HSD17B14Q9BPX1 270 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 NIFKQ9BYG3 293 aaKnown RBP15.22■□□□□ 0.03
FDPS-219ENST00000495308 ZSWIM4Q9H7M6 989 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 LRWD1Q9UFC0 647 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 CLIC4Q9Y696 253 aa15.22■□□□□ 0.03
FDPS-219ENST00000495308 A0A087WWV3 80 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 SMIM35A0A1B0GVV1 85 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 PP2D1A8MPX8 630 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 DKC1O60832 514 aaKnown RBP eCLIP15.21■□□□□ 0.03
FDPS-219ENST00000495308 CAND2O75155 1236 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 SPATA31C1P0DKV0 1188 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 RFC2P35250 354 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 PRPHP41219 470 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 NPEPPSP55786 919 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 TBC1D8BQ0IIM8 1120 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 TARBP2Q15633 366 aaKnown RBP15.21■□□□□ 0.03
FDPS-219ENST00000495308 DTHD1Q6ZMT9 781 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 RSPH3Q86UC2 560 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 C4orf19Q8IY42 314 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 METTL13Q8N6R0 699 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 IGSF22Q8N9C0 903 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 CEP89Q96ST8 783 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 PPP1R16BQ96T49 567 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 OSBPL7Q9BZF2 842 aa15.21■□□□□ 0.03
FDPS-219ENST00000495308 ZSCAN16Q9H4T2 348 aaPredicted RBP15.21■□□□□ 0.03
FDPS-219ENST00000495308 VWA3AA6NCI4 1184 aa15.2■□□□□ 0.02
FDPS-219ENST00000495308 CHRNA1P02708 482 aa15.2■□□□□ 0.02
FDPS-219ENST00000495308 VTNP04004 478 aa15.2■□□□□ 0.02
FDPS-219ENST00000495308 ZSCAN22P10073 491 aaPredicted RBP15.2■□□□□ 0.02
FDPS-219ENST00000495308 YWHABP31946 246 aaKnown RBP15.2■□□□□ 0.02
FDPS-219ENST00000495308 MRPS6P82932 125 aaKnown RBP15.2■□□□□ 0.02
FDPS-219ENST00000495308 CEBPZQ03701 1054 aaKnown RBP15.2■□□□□ 0.02
FDPS-219ENST00000495308 MGAT3Q09327 533 aa15.2■□□□□ 0.02
FDPS-219ENST00000495308 TCTN1Q2MV58 587 aa15.2■□□□□ 0.02
FDPS-219ENST00000495308 FOXD4L6Q3SYB3 417 aaPredicted RBP15.2■□□□□ 0.02
FDPS-219ENST00000495308 EFCAB12Q6NXP0 572 aa15.2■□□□□ 0.02
FDPS-219ENST00000495308 PSRC1Q6PGN9 363 aaPredicted RBP15.2■□□□□ 0.02
FDPS-219ENST00000495308 POTEGQ6S5H5 508 aa15.2■□□□□ 0.02
FDPS-219ENST00000495308 FOXD4L3Q6VB84 417 aaPredicted RBP15.2■□□□□ 0.02
FDPS-219ENST00000495308 OTOP2Q7RTS6 562 aa15.2■□□□□ 0.02
FDPS-219ENST00000495308 RPAINQ86UA6 219 aa15.2■□□□□ 0.02
FDPS-219ENST00000495308 CATSPER3Q86XQ3 398 aa15.2■□□□□ 0.02
FDPS-219ENST00000495308 RPUSD2Q8IZ73 545 aaKnown RBP15.2■□□□□ 0.02
FDPS-219ENST00000495308 KIAA0319LQ8IZA0 1049 aa15.2■□□□□ 0.02
FDPS-219ENST00000495308 ERMNQ8TAM6 284 aa15.2■□□□□ 0.02
FDPS-219ENST00000495308 CEP170P1Q96L14 293 aa15.2■□□□□ 0.02
FDPS-219ENST00000495308 CYP26B1Q9NR63 512 aa15.2■□□□□ 0.02
FDPS-219ENST00000495308 BMP2KQ9NSY1 1161 aaPredicted RBP15.2■□□□□ 0.02
FDPS-219ENST00000495308 CDY2AQ9Y6F7 541 aa15.2■□□□□ 0.02
FDPS-219ENST00000495308 A0A1W2PPC1 479 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 F13A1P00488 732 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 FGBP02675 491 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 CXCL10P02778 98 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 CDC25AP30304 524 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 DRP2Q13474 957 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 PDIA5Q14554 519 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 XKR9Q5GH70 373 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 HABP4Q5JVS0 413 aaKnown RBP15.19■□□□□ 0.02
FDPS-219ENST00000495308 FAM26DQ5JW98 314 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 HAUS3Q68CZ6 603 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 LINC01465Q8N7H1 131 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 SNX29Q8TEQ0 813 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 PIGOQ8TEQ8 1089 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 RNPC3Q96LT9 517 aaKnown RBP15.19■□□□□ 0.02
FDPS-219ENST00000495308 USP28Q96RU2 1077 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 POLR3CQ9BUI4 534 aaPredicted RBP15.19■□□□□ 0.02
FDPS-219ENST00000495308 RAB34Q9BZG1 259 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 SUGCTQ9HAC7 445 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 TUFT1Q9NNX1 390 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 TCHHQ07283 1943 aa15.19■□□□□ 0.02
FDPS-219ENST00000495308 M0QZ92 97 aa15.18■□□□□ 0.02
FDPS-219ENST00000495308 MAGEB2O15479 319 aa15.18■□□□□ 0.02
FDPS-219ENST00000495308 MAFO75444 373 aaPredicted RBP15.18■□□□□ 0.02
FDPS-219ENST00000495308 LYPLA2O95372 231 aa15.18■□□□□ 0.02
FDPS-219ENST00000495308 PARNO95453 639 aaKnown RBP15.18■□□□□ 0.02
FDPS-219ENST00000495308 PFKMP08237 780 aa15.18■□□□□ 0.02
FDPS-219ENST00000495308 GHRP10912 638 aa15.18■□□□□ 0.02
FDPS-219ENST00000495308 RPA1P27694 616 aa15.18■□□□□ 0.02
FDPS-219ENST00000495308 CCT6AP40227 531 aaKnown RBP15.18■□□□□ 0.02
FDPS-219ENST00000495308 GRIN1Q05586 938 aa15.18■□□□□ 0.02
FDPS-219ENST00000495308 PTPAQ15257 358 aa15.18■□□□□ 0.02
FDPS-219ENST00000495308 ECM1Q16610 540 aa15.18■□□□□ 0.02
FDPS-219ENST00000495308 ARL6IP4Q66PJ3 421 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms