RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 KRT25Q7Z3Z0 450 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 BBXQ8WY36 941 aaPredicted RBP15.84■□□□□ 0.13
VTI1A-206ENST00000489142 GTF3C6Q969F1 213 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 IL17RAQ96F46 866 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 TEKT3Q9BXF9 490 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 CELF4Q9BZC1 486 aaKnown RBP15.84■□□□□ 0.13
VTI1A-206ENST00000489142 SUGCTQ9HAC7 445 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 CDHR5Q9HBB8 845 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 COL1A2P08123 1366 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 KIAA1671Q9BY89 1806 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 RALGAPA2Q2PPJ7 1873 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 CCDC194A0A1B0GVG4 234 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 ENPP3O14638 875 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 ZNF862O60290 1169 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 JAK2O60674 1132 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 PSMD10O75832 226 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 VTNP04004 478 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 ST3GAL1Q11201 340 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 PAK2Q13177 524 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 EARS2Q5JPH6 523 aaKnown RBP15.83■□□□□ 0.12
VTI1A-206ENST00000489142 GALNT17Q6IS24 598 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 PIK3AP1Q6ZUJ8 805 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 KIAA0319LQ8IZA0 1049 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 METTL13Q8N6R0 699 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 ETNPPLQ8TBG4 499 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 RIT2Q99578 217 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 C22orf23Q9BZE7 217 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 DDX25Q9UHL0 483 aaKnown RBP15.83■□□□□ 0.12
VTI1A-206ENST00000489142 TTC3P53804 2025 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 COL4A6Q14031 1691 aa15.83■□□□□ 0.12
VTI1A-206ENST00000489142 ATG2AQ2TAZ0 1938 aa15.82■□□□□ 0.12
VTI1A-206ENST00000489142 CUL9Q8IWT3 2517 aa15.82■□□□□ 0.12
VTI1A-206ENST00000489142 CYP3A7-CYP3A51PA0A087WV96 503 aa15.82■□□□□ 0.12
VTI1A-206ENST00000489142 TMEM150BA6NC51 233 aa15.82■□□□□ 0.12
VTI1A-206ENST00000489142 OATP04181 439 aa15.82■□□□□ 0.12
VTI1A-206ENST00000489142 CYP3A7P24462 503 aa15.82■□□□□ 0.12
VTI1A-206ENST00000489142 CLCN3P51790 818 aa15.82■□□□□ 0.12
VTI1A-206ENST00000489142 KIZQ2M2Z5 673 aa15.82■□□□□ 0.12
VTI1A-206ENST00000489142 MIER3Q7Z3K6 550 aa15.82■□□□□ 0.12
VTI1A-206ENST00000489142 RTN4RL1Q86UN2 441 aaPredicted RBP15.82■□□□□ 0.12
VTI1A-206ENST00000489142 LRRC71Q8N4P6 559 aa15.82■□□□□ 0.12
VTI1A-206ENST00000489142 NSUN7Q8NE18 718 aaKnown RBP15.82■□□□□ 0.12
VTI1A-206ENST00000489142 FBXO22Q8NEZ5 403 aa15.82■□□□□ 0.12
VTI1A-206ENST00000489142 SP7Q8TDD2 431 aaPredicted RBP15.82■□□□□ 0.12
VTI1A-206ENST00000489142 TMEM40Q8WWA1 233 aa15.82■□□□□ 0.12
VTI1A-206ENST00000489142 ZNF668Q96K58 619 aaPredicted RBP15.82■□□□□ 0.12
VTI1A-206ENST00000489142 THEGQ9P2T0 379 aa15.82■□□□□ 0.12
VTI1A-206ENST00000489142 PADI3Q9ULW8 664 aa15.82■□□□□ 0.12
VTI1A-206ENST00000489142 TCF20Q9UGU0 1960 aaKnown RBP15.82■□□□□ 0.12
VTI1A-206ENST00000489142 XIRP2A4UGR9 3374 aa15.81■□□□□ 0.12
VTI1A-206ENST00000489142 RPLP2P05387 115 aaKnown RBP15.81■□□□□ 0.12
VTI1A-206ENST00000489142 XBP1P17861 261 aa15.81■□□□□ 0.12
VTI1A-206ENST00000489142 TFF2Q03403 129 aa15.81■□□□□ 0.12
VTI1A-206ENST00000489142 NFX1Q12986 1120 aaKnown RBP15.81■□□□□ 0.12
VTI1A-206ENST00000489142 NR5A1Q13285 461 aa15.81■□□□□ 0.12
VTI1A-206ENST00000489142 C8orf34Q49A92 452 aa15.81■□□□□ 0.12
VTI1A-206ENST00000489142 NME8Q8N427 588 aa15.81■□□□□ 0.12
VTI1A-206ENST00000489142 BANK1Q8NDB2 785 aa15.81■□□□□ 0.12
VTI1A-206ENST00000489142 MBOAT7Q96N66 472 aa15.81■□□□□ 0.12
VTI1A-206ENST00000489142 OSMRQ99650 979 aa15.81■□□□□ 0.12
VTI1A-206ENST00000489142 SH2D3AQ9BRG2 576 aa15.81■□□□□ 0.12
VTI1A-206ENST00000489142 TMX1Q9H3N1 280 aa15.81■□□□□ 0.12
VTI1A-206ENST00000489142 SPTBN5Q9NRC6 3674 aaKnown RBP15.81■□□□□ 0.12
VTI1A-206ENST00000489142 CCNT1O60563 726 aaKnown RBP15.8■□□□□ 0.12
VTI1A-206ENST00000489142 POU3F3P20264 500 aaPredicted RBP15.8■□□□□ 0.12
VTI1A-206ENST00000489142 SFNP31947 248 aa15.8■□□□□ 0.12
VTI1A-206ENST00000489142 KRT2P35908 639 aa15.8■□□□□ 0.12
VTI1A-206ENST00000489142 JAK3P52333 1124 aa15.8■□□□□ 0.12
VTI1A-206ENST00000489142 EPC2Q52LR7 807 aa15.8■□□□□ 0.12
VTI1A-206ENST00000489142 NEK8Q86SG6 692 aa15.8■□□□□ 0.12
VTI1A-206ENST00000489142 FAM177A1Q8N128 213 aaPredicted RBP15.8■□□□□ 0.12
VTI1A-206ENST00000489142 WASF1Q92558 559 aa15.8■□□□□ 0.12
VTI1A-206ENST00000489142 FAM167AQ96KS9 214 aa15.8■□□□□ 0.12
VTI1A-206ENST00000489142 SEPT9Q9UHD8 586 aaPredicted RBP15.8■□□□□ 0.12
VTI1A-206ENST00000489142 NOC2LQ9Y3T9 749 aaKnown RBP15.8■□□□□ 0.12
VTI1A-206ENST00000489142 KDM3AQ9Y4C1 1321 aa15.79■□□□□ 0.12
VTI1A-206ENST00000489142 EML1O00423 815 aa15.79■□□□□ 0.12
VTI1A-206ENST00000489142 MGEA5O60502 916 aa15.79■□□□□ 0.12
VTI1A-206ENST00000489142 RPS6KA5O75582 802 aa15.79■□□□□ 0.12
VTI1A-206ENST00000489142 CSPG5O95196 566 aa15.79■□□□□ 0.12
VTI1A-206ENST00000489142 GATMP50440 423 aa15.79■□□□□ 0.12
VTI1A-206ENST00000489142 MTERF2Q49AM1 385 aa15.79■□□□□ 0.12
VTI1A-206ENST00000489142 PAN2Q504Q3 1202 aaKnown RBP15.79■□□□□ 0.12
VTI1A-206ENST00000489142 EFCAB12Q6NXP0 572 aa15.79■□□□□ 0.12
VTI1A-206ENST00000489142 MOXD1Q6UVY6 613 aa15.79■□□□□ 0.12
VTI1A-206ENST00000489142 POTEDQ86YR6 584 aa15.79■□□□□ 0.12
VTI1A-206ENST00000489142 TMEM192Q8IY95 271 aa15.79■□□□□ 0.12
VTI1A-206ENST00000489142 ERVK-5Q9HDB9 667 aa15.79■□□□□ 0.12
VTI1A-206ENST00000489142 CEP131Q9UPN4 1083 aa15.79■□□□□ 0.12
VTI1A-206ENST00000489142 AKT3Q9Y243 479 aa15.79■□□□□ 0.12
VTI1A-206ENST00000489142 ADGRA3Q8IWK6 1321 aa15.78■□□□□ 0.12
VTI1A-206ENST00000489142 GPR32O75388 356 aa15.78■□□□□ 0.12
VTI1A-206ENST00000489142 CTNNB1P35222 781 aa15.78■□□□□ 0.12
VTI1A-206ENST00000489142 TJAP1Q5JTD0 557 aa15.78■□□□□ 0.12
VTI1A-206ENST00000489142 B3GNT9Q6UX72 402 aa15.78■□□□□ 0.12
VTI1A-206ENST00000489142 CCDC83Q8IWF9 413 aa15.78■□□□□ 0.12
VTI1A-206ENST00000489142 FIBCD1Q8N539 461 aa15.78■□□□□ 0.12
VTI1A-206ENST00000489142 TNFRSF25Q93038 417 aa15.78■□□□□ 0.12
VTI1A-206ENST00000489142 TSPYL2Q9H2G4 693 aaPredicted RBP15.78■□□□□ 0.12
VTI1A-206ENST00000489142 RC3H2Q9HBD1 1191 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms