RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 EIF3CQ99613 913 aaKnown RBP20.19■□□□□ 0.82
COL16A1-215ENST00000488897 ZNFX1Q9P2E3 1918 aaKnown RBP20.19■□□□□ 0.82
COL16A1-215ENST00000488897 SOWAHBA6NEL2 793 aa20.19■□□□□ 0.82
COL16A1-215ENST00000488897 PRKCZQ05513 592 aa20.19■□□□□ 0.82
COL16A1-215ENST00000488897 KCTD2Q14681 263 aa20.19■□□□□ 0.82
COL16A1-215ENST00000488897 COBLL1Q53SF7 1204 aa20.19■□□□□ 0.82
COL16A1-215ENST00000488897 HSP90B2PQ58FF3 399 aa20.19■□□□□ 0.82
COL16A1-215ENST00000488897 FIGNQ5HY92 759 aa20.19■□□□□ 0.82
COL16A1-215ENST00000488897 REXO1Q8N1G1 1221 aaKnown RBP20.19■□□□□ 0.82
COL16A1-215ENST00000488897 CNOT6LQ96LI5 555 aaKnown RBP20.19■□□□□ 0.82
COL16A1-215ENST00000488897 FLRT1Q9NZU1 646 aa20.19■□□□□ 0.82
COL16A1-215ENST00000488897 VPS18Q9P253 973 aa20.19■□□□□ 0.82
COL16A1-215ENST00000488897 MTIF2P46199 727 aaKnown RBP20.18■□□□□ 0.82
COL16A1-215ENST00000488897 LBX1P52954 281 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 GYS2P54840 703 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 ASIC1P78348 528 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 CDK17Q00537 523 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 ORC2Q13416 577 aaPredicted RBP20.18■□□□□ 0.82
COL16A1-215ENST00000488897 ANKRD40Q6AI12 368 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 PLEKHH3Q7Z736 793 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 LRRC15Q8TF66 581 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 NHEJ1Q9H9Q4 299 aaPredicted RBP20.18■□□□□ 0.82
COL16A1-215ENST00000488897 SUGCTQ9HAC7 445 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 AGPAT5Q9NUQ2 364 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 A0A1W2PQJ5 194 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 ENC1O14682 589 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 CCNT1O60563 726 aaKnown RBP20.18■□□□□ 0.82
COL16A1-215ENST00000488897 ATP1A1P05023 1023 aaKnown RBP20.18■□□□□ 0.82
COL16A1-215ENST00000488897 HSPA1AP0DMV8 641 aaKnown RBP20.18■□□□□ 0.82
COL16A1-215ENST00000488897 HSPA1BP0DMV9 641 aaKnown RBP20.18■□□□□ 0.82
COL16A1-215ENST00000488897 FDX1P10109 184 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 MYCLP12524 364 aaPredicted RBP20.18■□□□□ 0.82
COL16A1-215ENST00000488897 LMAN1P49257 510 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 CCNA1P78396 465 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 LETM2Q2VYF4 491 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 MAP9Q49MG5 647 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 PRAMEF19Q5SWL8 479 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 CNNM4Q6P4Q7 775 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 FAM71BQ8TC56 605 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 FGD4Q96M96 766 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 ERGIC2Q96RQ1 377 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 RMDN3Q96TC7 470 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 NOC4LQ9BVI4 516 aaKnown RBP20.18■□□□□ 0.82
COL16A1-215ENST00000488897 IVNS1ABPQ9Y6Y0 642 aa20.18■□□□□ 0.82
COL16A1-215ENST00000488897 ANO9A1A5B4 782 aa20.17■□□□□ 0.82
COL16A1-215ENST00000488897 SLC25A27O95847 323 aa20.17■□□□□ 0.82
COL16A1-215ENST00000488897 CLK2P49760 499 aaKnown RBP20.17■□□□□ 0.82
COL16A1-215ENST00000488897 NEK8Q86SG6 692 aa20.17■□□□□ 0.82
COL16A1-215ENST00000488897 DPP9Q86TI2 863 aa20.17■□□□□ 0.82
COL16A1-215ENST00000488897 PCMTD1Q96MG8 357 aaPredicted RBP20.17■□□□□ 0.82
COL16A1-215ENST00000488897 VIPAS39Q9H9C1 493 aa20.17■□□□□ 0.82
COL16A1-215ENST00000488897 HDAC6Q9UBN7 1215 aa20.17■□□□□ 0.82
COL16A1-215ENST00000488897 TARSL2A2RTX5 802 aaKnown RBP20.17■□□□□ 0.82
COL16A1-215ENST00000488897 MRPL12P52815 198 aaKnown RBP20.17■□□□□ 0.82
COL16A1-215ENST00000488897 STK4Q13043 487 aa20.17■□□□□ 0.82
COL16A1-215ENST00000488897 ZSCAN26Q16670 478 aa20.17■□□□□ 0.82
COL16A1-215ENST00000488897 FKBP15Q5T1M5 1219 aa20.17■□□□□ 0.82
COL16A1-215ENST00000488897 CHST13Q8NET6 341 aa20.17■□□□□ 0.82
COL16A1-215ENST00000488897 GOLGA5Q8TBA6 731 aa20.17■□□□□ 0.82
COL16A1-215ENST00000488897 TBCKQ8TEA7 893 aa20.17■□□□□ 0.82
COL16A1-215ENST00000488897 CALML4Q96GE6 196 aa20.17■□□□□ 0.82
COL16A1-215ENST00000488897 MED4Q9NPJ6 270 aa20.17■□□□□ 0.82
COL16A1-215ENST00000488897 CWC15Q9P013 229 aaKnown RBP20.17■□□□□ 0.82
COL16A1-215ENST00000488897 ELNP15502 786 aa20.16■□□□□ 0.82
COL16A1-215ENST00000488897 FLT3LGP49771 235 aa20.16■□□□□ 0.82
COL16A1-215ENST00000488897 HSD17B4P51659 736 aa20.16■□□□□ 0.82
COL16A1-215ENST00000488897 TRIM32Q13049 653 aa20.16■□□□□ 0.82
COL16A1-215ENST00000488897 TSGA10Q9BZW7 698 aa20.16■□□□□ 0.82
COL16A1-215ENST00000488897 MROH8Q9H579 483 aa20.16■□□□□ 0.82
COL16A1-215ENST00000488897 BCAS3Q9H6U6 928 aa20.16■□□□□ 0.82
COL16A1-215ENST00000488897 PKD2L1Q9P0L9 805 aa20.16■□□□□ 0.82
COL16A1-215ENST00000488897 GJD2Q9UKL4 321 aa20.16■□□□□ 0.82
COL16A1-215ENST00000488897 MCM3APO60318 1980 aa20.16■□□□□ 0.82
COL16A1-215ENST00000488897 LCTP09848 1927 aa20.16■□□□□ 0.82
COL16A1-215ENST00000488897 MMS19Q96T76 1030 aa20.16■□□□□ 0.82
COL16A1-215ENST00000488897 ANO3Q9BYT9 981 aa20.16■□□□□ 0.82
COL16A1-215ENST00000488897 THSD7BQ9C0I4 1608 aa20.15■□□□□ 0.82
COL16A1-215ENST00000488897 SPDYE3A6NKU9 549 aa20.15■□□□□ 0.82
COL16A1-215ENST00000488897 TULP2O00295 520 aa20.15■□□□□ 0.82
COL16A1-215ENST00000488897 ACTN2P35609 894 aa20.15■□□□□ 0.82
COL16A1-215ENST00000488897 KIF5AQ12840 1032 aa20.15■□□□□ 0.82
COL16A1-215ENST00000488897 MIIPQ5JXC2 388 aa20.15■□□□□ 0.82
COL16A1-215ENST00000488897 ARHGEF16Q5VV41 709 aa20.15■□□□□ 0.82
COL16A1-215ENST00000488897 PLXNB2O15031 1838 aa20.15■□□□□ 0.82
COL16A1-215ENST00000488897 RBAK-RBAKDNI3L0D1 243 aa20.14■□□□□ 0.82
COL16A1-215ENST00000488897 TDP2O95551 362 aa20.14■□□□□ 0.82
COL16A1-215ENST00000488897 MAPK4P31152 587 aa20.14■□□□□ 0.82
COL16A1-215ENST00000488897 TECP42680 631 aa20.14■□□□□ 0.82
COL16A1-215ENST00000488897 SPA17Q15506 151 aa20.14■□□□□ 0.82
COL16A1-215ENST00000488897 REM2Q8IYK8 340 aaPredicted RBP20.14■□□□□ 0.82
COL16A1-215ENST00000488897 LACRTQ9GZZ8 138 aa20.14■□□□□ 0.82
COL16A1-215ENST00000488897 FAN1Q9Y2M0 1017 aa20.14■□□□□ 0.82
COL16A1-215ENST00000488897 N4BP1O75113 896 aaKnown RBP20.14■□□□□ 0.81
COL16A1-215ENST00000488897 KLK7P49862 253 aa20.14■□□□□ 0.81
COL16A1-215ENST00000488897 VAV2P52735 878 aa20.14■□□□□ 0.81
COL16A1-215ENST00000488897 GRB14Q14449 540 aa20.14■□□□□ 0.81
COL16A1-215ENST00000488897 IQCEQ6IPM2 695 aa20.14■□□□□ 0.81
COL16A1-215ENST00000488897 SV2BQ7L1I2 683 aa20.14■□□□□ 0.81
COL16A1-215ENST00000488897 MCF2L2Q86YR7 1114 aa20.14■□□□□ 0.81
COL16A1-215ENST00000488897 CCDC42Q96M95 316 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms