RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 PCDHA4Q9UN74 947 aa10.68□□□□□ -0.7
NUP50-215ENST00000484186 SAMM50Q9Y512 469 aa10.68□□□□□ -0.7
NUP50-215ENST00000484186 COL4A6Q14031 1691 aa10.68□□□□□ -0.7
NUP50-215ENST00000484186 TCF20Q9UGU0 1960 aaKnown RBP10.67□□□□□ -0.7
NUP50-215ENST00000484186 WDR64B1ANS9 1081 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 C5orf67F2Z3F1 127 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 MSH4O15457 936 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 RPS6KA5O75582 802 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 LINC00271P0C7V0 271 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 STAG3L1P0CL83 205 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 CTNNB1P35222 781 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 NFX1Q12986 1120 aaKnown RBP10.67□□□□□ -0.7
NUP50-215ENST00000484186 STK3Q13188 491 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 TMEM266Q2M3C6 531 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 TIGD5Q53EQ6 642 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 ODR4Q5SWX8 454 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 NPAS4Q8IUM7 802 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 BLIDQ8IZY5 108 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 BANK1Q8NDB2 785 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 TBCKQ8TEA7 893 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 TMX1Q9H3N1 280 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 DISC1Q9NRI5 854 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 NRBP2Q9NSY0 501 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 CEP131Q9UPN4 1083 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 GINS2Q9Y248 185 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 NOC2LQ9Y3T9 749 aaKnown RBP10.67□□□□□ -0.7
NUP50-215ENST00000484186 TTC3P53804 2025 aa10.67□□□□□ -0.7
NUP50-215ENST00000484186 CYP3A7-CYP3A51PA0A087WV96 503 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 M0R2N6 131 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 GPR182O15218 404 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 MAGEB2O15479 319 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 GAS7O60861 476 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 C22orf31O95567 290 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 CYP3A7P24462 503 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 CRYBB1P53674 252 aaPredicted RBP10.66□□□□□ -0.7
NUP50-215ENST00000484186 LEXMQ3ZCV2 418 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 Q4G0T1 1027 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 GALNT17Q6IS24 598 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 CMTR2Q8IYT2 770 aaKnown RBP10.66□□□□□ -0.7
NUP50-215ENST00000484186 FAM177A1Q8N128 213 aaPredicted RBP10.66□□□□□ -0.7
NUP50-215ENST00000484186 METTL13Q8N6R0 699 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 DAGLBQ8NCG7 672 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 TMEM40Q8WWA1 233 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 SLC5A5Q92911 643 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 FAM167AQ96KS9 214 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 RIT2Q99578 217 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 C11orf84Q9BUA3 381 aaPredicted RBP10.66□□□□□ -0.7
NUP50-215ENST00000484186 PLVAPQ9BX97 442 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 TEKT3Q9BXF9 490 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 LMAN2LQ9H0V9 348 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 NSUN3Q9H649 340 aaKnown RBP10.66□□□□□ -0.7
NUP50-215ENST00000484186 ERVK-5Q9HDB9 667 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 PPP4R2Q9NY27 417 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 LRFN2Q9ULH4 789 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 ST3GAL5Q9UNP4 418 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 PCDHB7Q9Y5E2 793 aa10.66□□□□□ -0.7
NUP50-215ENST00000484186 GRM6O15303 877 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 ZNF862O60290 1169 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 MGEA5O60502 916 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 GPR32O75388 356 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 VTNP04004 478 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 KCNA5P22460 613 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 SFNP31947 248 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 SARSP49591 514 aaKnown RBP10.65□□□□□ -0.7
NUP50-215ENST00000484186 JAK3P52333 1124 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 KIZQ2M2Z5 673 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 NAALADL2Q58DX5 795 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 TCEAL5Q5H9L2 206 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 LRCH2Q5VUJ6 765 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 EFCAB12Q6NXP0 572 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.65□□□□□ -0.7
NUP50-215ENST00000484186 GJA10Q969M2 543 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 AIFM3Q96NN9 605 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 PPP1R16BQ96T49 567 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 OSMRQ99650 979 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 ADAM2Q99965 735 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 UNC45AQ9H3U1 944 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 RGS18Q9NS28 235 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 C1orf112Q9NSG2 853 aa10.65□□□□□ -0.7
NUP50-215ENST00000484186 RNF216Q9NWF9 866 aaPredicted RBP10.65□□□□□ -0.7
NUP50-215ENST00000484186 MRPL42Q9Y6G3 142 aaKnown RBP10.65□□□□□ -0.7
NUP50-215ENST00000484186 REV3LO60673 3130 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 DENND3A2RUS2 1198 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 CHMP2AO43633 222 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 NCK2O43639 380 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 PSMD10O75832 226 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 CDKL5O76039 1030 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 OATP04181 439 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 TMOD1P28289 359 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 CLCN3P51790 818 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 SCRN1Q12765 414 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 NONOQ15233 471 aaKnown RBP eCLIP10.64□□□□□ -0.71
NUP50-215ENST00000484186 NPY5RQ15761 445 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 UGCGQ16739 394 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 PUS10Q3MIT2 529 aaKnown RBP10.64□□□□□ -0.71
NUP50-215ENST00000484186 PAN2Q504Q3 1202 aaKnown RBP10.64□□□□□ -0.71
NUP50-215ENST00000484186 ERICH6BQ5W0A0 696 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 MOXD1Q6UVY6 613 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 SLC24A5Q71RS6 500 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 MIER3Q7Z3K6 550 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms